Conservation of cofitness between HER17_RS10965 and HER17_RS21530 in Pectobacterium carotovorum WPP14

62 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS10965 acyl-CoA thioester hydrolase YciA 1.0 HER17_RS21530 ribokinase 0.74 1
Dickeya dianthicola ME23 0.89 DZA65_RS10910 acyl-CoA thioester hydrolase YciA 0.81 DZA65_RS22295 ribokinase low > 75
Dickeya dadantii 3937 0.89 DDA3937_RS10430 acyl-CoA thioester hydrolase YciA 0.82 DDA3937_RS00050 ribokinase low > 74
Dickeya dianthicola 67-19 0.88 HGI48_RS10435 acyl-CoA thioester hydrolase YciA 0.81 HGI48_RS21315 ribokinase low > 71
Rahnella sp. WP5 0.85 EX31_RS10010 acyl-CoA thioester hydrolase YciA 0.74 EX31_RS06190 ribokinase low > 89
Serratia liquefaciens MT49 0.84 IAI46_14085 acyl-CoA thioester hydrolase YciA 0.79 IAI46_25055 ribokinase low > 86
Enterobacter asburiae PDN3 0.80 EX28DRAFT_0923 Acyl-CoA hydrolase 0.66 EX28DRAFT_4028 ribokinase low > 76
Pantoea sp. MT58 0.80 IAI47_09135 acyl-CoA thioester hydrolase YciA 0.71 IAI47_00370 ribokinase low > 76
Enterobacter sp. TBS_079 0.80 MPMX20_02575 putative acyl-CoA thioester hydrolase 0.69 MPMX20_04615 Ribokinase low > 85
Klebsiella michiganensis M5al 0.79 BWI76_RS11790 acyl-CoA thioesterase 0.70 BWI76_RS00290 Ribokinase (EC 2.7.1.15) (from data) low > 92
Escherichia coli ECOR38 0.79 HEPCGN_25145 yciA acyl-CoA thioester hydrolase YciA 0.70 HEPCGN_13440 rbsK ribokinase low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.79 OHPLBJKB_02430 putative acyl-CoA thioester hydrolase 0.71 OHPLBJKB_04301 Ribokinase low > 73
Escherichia coli BL21 0.79 ECD_01227 acyl-CoA esterase 0.71 ECD_03638 ribokinase low > 61
Escherichia fergusonii Becca 0.79 EFB2_02672 putative acyl-CoA thioester hydrolase 0.71 EFB2_04881 Ribokinase low > 86
Escherichia coli ECOR27 0.79 NOLOHH_20370 yciA acyl-CoA thioester hydrolase YciA 0.71 NOLOHH_06865 rbsK ribokinase low > 75
Escherichia coli Nissle 1917 0.79 ECOLIN_RS07565 acyl-CoA thioester hydrolase YciA 0.71 ECOLIN_RS21570 ribokinase low > 55
Escherichia coli BW25113 0.79 b1253 yciA predicted hydrolase (NCBI) 0.71 b3752 rbsK ribokinase (NCBI) low > 76
Escherichia coli ECRC62 0.79 BNILDI_18515 yciA acyl-CoA thioester hydrolase YciA 0.71 BNILDI_04660 rbsK ribokinase 0.79 7
Escherichia coli ECRC101 0.79 MCAODC_21580 yciA acyl-CoA thioester hydrolase YciA 0.71 MCAODC_05235 rbsK ribokinase low > 87
Escherichia coli ECRC99 0.79 KEDOAH_25675 yciA acyl-CoA thioester hydrolase YciA 0.71 KEDOAH_13420 rbsK ribokinase — —
Escherichia coli ECRC98 0.79 JDDGAC_05895 yciA acyl-CoA thioester hydrolase YciA 0.71 JDDGAC_18350 rbsK ribokinase low > 86
Escherichia coli ECRC102 0.79 NIAGMN_27555 yciA acyl-CoA thioester hydrolase YciA 0.71 NIAGMN_12485 rbsK ribokinase — —
Escherichia coli ECRC100 0.79 OKFHMN_28680 yciA acyl-CoA thioester hydrolase YciA 0.71 OKFHMN_14730 rbsK ribokinase low > 80
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.77 GFF2735 Acyl-CoA thioesterase YciA, involved in membrane biogenesis 0.70 GFF1705 Ribokinase (EC 2.7.1.15) low > 78
Vibrio cholerae E7946 ATCC 55056 0.61 CSW01_08560 acyl-CoA thioester hydrolase YciA 0.54 CSW01_14665 ribokinase low > 62
Dinoroseobacter shibae DFL-12 0.52 Dshi_2218 thioesterase superfamily protein (RefSeq) 0.32 Dshi_1976 PfkB domain protein (RefSeq) low > 64
Acinetobacter radioresistens SK82 0.48 MPMX26_02646 putative acyl-CoA thioester hydrolase 0.11 MPMX26_01273 Ribokinase low > 36
Bosea sp. OAE506 0.47 ABIE41_RS12055 acyl-CoA thioesterase 0.24 ABIE41_RS03745 ribokinase low > 77
Brevundimonas sp. GW460-12-10-14-LB2 0.46 A4249_RS12320 acyl-CoA thioesterase 0.24 A4249_RS15765 ribokinase low > 48
Rhodospirillum rubrum S1H 0.45 Rru_A2709 Thioesterase superfamily (NCBI) 0.31 Rru_A2297 Ribokinase (NCBI) low > 58
Azospirillum sp. SherDot2 0.45 MPMX19_00971 putative acyl-CoA thioester hydrolase 0.31 MPMX19_02957 Ribokinase low > 112
Pseudomonas syringae pv. syringae B728a 0.44 Psyr_5043 Thioesterase superfamily 0.39 Psyr_2155 Carbohydrate kinase, PfkB low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.44 Psyr_5043 Thioesterase superfamily 0.39 Psyr_2155 Carbohydrate kinase, PfkB low > 86
Caulobacter crescentus NA1000 Δfur 0.44 CCNA_00190 acyl-CoA hydrolase 0.24 CCNA_01001 ribokinase low > 67
Caulobacter crescentus NA1000 0.44 CCNA_00190 acyl-CoA hydrolase 0.24 CCNA_01001 ribokinase low > 66
Pseudomonas sp. RS175 0.44 PFR28_04491 putative acyl-CoA thioester hydrolase 0.37 PFR28_02733 Ribokinase low > 88
Pseudomonas fluorescens FW300-N2E2 0.44 Pf6N2E2_4077 cytosolic long-chain acyl-CoA thioester hydrolase family protein 0.35 Pf6N2E2_165 Ribokinase (EC 2.7.1.15) low > 103
Pseudomonas fluorescens FW300-N2C3 0.44 AO356_11055 long-chain acyl-CoA thioester hydrolase 0.34 AO356_00950 Ribokinase (EC 2.7.1.15) (from data) low > 104
Pseudomonas fluorescens SBW25-INTG 0.43 PFLU_RS29780 acyl-CoA thioesterase 0.34 PFLU_RS20360 ribokinase low > 109
Pseudomonas fluorescens SBW25 0.43 PFLU_RS29780 acyl-CoA thioesterase 0.34 PFLU_RS20360 ribokinase low > 109
Pseudomonas simiae WCS417 0.43 PS417_28095 long-chain acyl-CoA thioester hydrolase 0.36 PS417_18385 ribokinase — —
Pseudomonas fluorescens FW300-N1B4 0.43 Pf1N1B4_2032 cytosolic long-chain acyl-CoA thioester hydrolase family protein 0.35 Pf1N1B4_6031 Ribokinase (EC 2.7.1.15) (from data) — —
Magnetospirillum magneticum AMB-1 0.43 AMB_RS16945 acyl-CoA thioesterase 0.10 AMB_RS16380 carbohydrate kinase family protein low > 64
Agrobacterium fabrum C58 0.43 Atu3861 acyl-CoA hydrolase 0.30 Atu4847 ribokinase low > 89
Pseudomonas putida KT2440 0.43 PP_5331 Long-chain acyl-CoA thioester hydrolase 0.34 PP_2458 ribokinase low > 96
Pseudomonas fluorescens GW456-L13 0.43 PfGW456L13_751 cytosolic long-chain acyl-CoA thioester hydrolase family protein 0.34 PfGW456L13_3908 Ribokinase (EC 2.7.1.15) low > 87
Pseudomonas fluorescens FW300-N2E3 0.43 AO353_09915 long-chain acyl-CoA thioester hydrolase 0.33 AO353_20835 Ribokinase (EC 2.7.1.15) (from data) low > 101
Acidovorax sp. GW101-3H11 0.43 Ac3H11_1945 Acyl-CoA hydrolase (EC 3.1.2.20) 0.29 Ac3H11_1839 Ribokinase (EC 2.7.1.15) low > 79
Sinorhizobium meliloti 1021 0.42 SMc04228 hypothetical protein 0.26 SMc01103 Ribokinase (EC 2.7.1.15) (from data) low > 103
Variovorax sp. OAS795 0.42 ABID97_RS05905 acyl-CoA thioesterase 0.31 ABID97_RS24775 ribokinase — —
Ralstonia solanacearum IBSBF1503 0.42 RALBFv3_RS11535 acyl-CoA thioesterase 0.34 RALBFv3_RS14235 ribokinase — —
Ralstonia solanacearum PSI07 0.42 RPSI07_RS21675 acyl-CoA thioesterase 0.35 RPSI07_RS19230 ribokinase low > 81
Ralstonia solanacearum UW163 0.42 UW163_RS02050 acyl-CoA thioesterase 0.34 UW163_RS11700 ribokinase — —
Variovorax sp. SCN45 0.42 GFF4599 Acyl-CoA hydrolase (EC 3.1.2.20) 0.32 GFF2136 Ribokinase (EC 2.7.1.15) low > 127
Ralstonia solanacearum GMI1000 0.41 RS_RS02365 acyl-CoA thioesterase 0.35 RS_RS05015 ribokinase low > 80
Paraburkholderia graminis OAS925 0.41 ABIE53_000793 acyl-CoA thioesterase YciA 0.33 ABIE53_002321 ribokinase low > 113
Paraburkholderia bryophila 376MFSha3.1 0.41 H281DRAFT_04633 (3S)-malyl-CoA thioesterase 0.34 H281DRAFT_05229 ribokinase low > 103
Ralstonia sp. UNC404CL21Col 0.41 ABZR87_RS07500 acyl-CoA thioesterase 0.34 ABZR87_RS09950 ribokinase low > 80
Rhizobium sp. OAE497 0.40 ABIE40_RS10785 acyl-CoA thioesterase 0.28 ABIE40_RS01880 ribokinase low > 107
Paraburkholderia sabiae LMG 24235 0.40 QEN71_RS02095 acyl-CoA thioesterase 0.34 QEN71_RS35905 ribokinase low > 153
Burkholderia phytofirmans PsJN 0.39 BPHYT_RS03270 acyl-CoA hydrolase 0.40 BPHYT_RS20695 ribokinase low > 109
Sphingomonas koreensis DSMZ 15582 0.38 Ga0059261_3714 Acyl-CoA hydrolase 0.20 Ga0059261_0568 Sugar kinases, ribokinase family — —
Herbaspirillum seropedicae SmR1 0.38 HSERO_RS19275 acyl-CoA hydrolase 0.35 HSERO_RS11500 Ribokinase (EC 2.7.1.15) (from data) low > 78

Not shown: 8 genomes with orthologs for HER17_RS10965 only; 20 genomes with orthologs for HER17_RS21530 only