Conservation of cofitness between HER17_RS12935 and HER17_RS21315 in Pectobacterium carotovorum WPP14

58 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS12935 microcin C ABC transporter ATP-binding protein YejF 1.0 HER17_RS21315 FAD-binding oxidoreductase 0.56 9
Dickeya dadantii 3937 0.76 DDA3937_RS09175 microcin C ABC transporter ATP-binding protein YejF 0.61 DDA3937_RS09900 FAD-dependent oxidoreductase low > 74
Dickeya dianthicola 67-19 0.75 HGI48_RS09215 microcin C ABC transporter ATP-binding protein YejF 0.61 HGI48_RS09905 FAD-dependent oxidoreductase low > 71
Dickeya dianthicola ME23 0.75 DZA65_RS09520 microcin C ABC transporter ATP-binding protein YejF 0.61 DZA65_RS10240 FAD-dependent oxidoreductase low > 75
Klebsiella michiganensis M5al 0.72 BWI76_RS19795 microcin C ABC transporter ATP-binding protein YejF 0.52 BWI76_RS14710 FAD-dependent oxidoreductase low > 92
Rahnella sp. WP5 0.72 EX31_RS19145 microcin C ABC transporter ATP-binding protein YejF 0.70 EX31_RS15580 FAD-dependent oxidoreductase low > 89
Enterobacter asburiae PDN3 0.72 EX28DRAFT_0381 ABC-type uncharacterized transport system, duplicated ATPase component 0.11 EX28DRAFT_1502 Glycine/D-amino acid oxidases (deaminating) low > 76
Escherichia coli BW25113 0.70 b2180 yejF fused predicted oligopeptide transporter subunits of ABC superfamilly: ATP-binding components (NCBI) 0.10 b1301 puuB gamma-Glu-putrescine oxidase, FAD/NAD(P)-binding (NCBI) low > 76
Escherichia coli ECRC98 0.70 JDDGAC_27335 yejF microcin C ABC transporter ATP-binding protein YejF 0.10 JDDGAC_04970 puuB gamma-glutamylputrescine oxidase low > 86
Escherichia coli ECRC102 0.70 NIAGMN_21140 yejF microcin C ABC transporter ATP-binding protein YejF 0.10 NIAGMN_26595 puuB gamma-glutamylputrescine oxidase
Escherichia coli ECRC100 0.70 OKFHMN_23375 yejF microcin C ABC transporter ATP-binding protein YejF 0.10 OKFHMN_02425 puuB gamma-glutamylputrescine oxidase low > 80
Escherichia coli ECRC99 0.70 KEDOAH_04810 yejF microcin C ABC transporter ATP-binding protein YejF 0.10 KEDOAH_26350 puuB gamma-glutamylputrescine oxidase
Escherichia coli ECRC101 0.70 MCAODC_14425 yejF microcin C ABC transporter ATP-binding protein YejF 0.10 MCAODC_15845 puuB gamma-glutamylputrescine oxidase low > 87
Escherichia coli ECRC62 0.70 BNILDI_13870 yejF microcin C ABC transporter ATP-binding protein YejF 0.10 BNILDI_18260 puuB gamma-glutamylputrescine oxidase low > 75
Escherichia coli ECOR27 0.70 NOLOHH_14950 yejF microcin C ABC transporter ATP-binding protein YejF 0.10 NOLOHH_20110 puuB gamma-glutamylputrescine oxidase low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.70 OHPLBJKB_01529 putative ABC transporter ATP-binding protein YejF 0.10 OHPLBJKB_02381 Gamma-glutamylputrescine oxidoreductase low > 73
Escherichia coli ECOR38 0.70 HEPCGN_22640 yejF microcin C ABC transporter ATP-binding protein YejF 0.10 HEPCGN_25775 puuB gamma-glutamylputrescine oxidase low > 87
Escherichia coli BL21 0.70 ECD_02110 microcin C ABC transporter ATPase 0.10 ECD_01278 gamma-glutamylputrescine oxidoreductase low > 61
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.69 GFF3756 Putative ABC transporter ATP-binding protein 0.08 GFF3084 FIG00553873: hypothetical protein low > 78
Serratia liquefaciens MT49 0.68 IAI46_17330 microcin C ABC transporter ATP-binding protein YejF 0.10 IAI46_10540 FAD-binding oxidoreductase low > 86
Pantoea sp. MT58 0.67 IAI47_06600 microcin C ABC transporter ATP-binding protein YejF 0.12 IAI47_07595 FAD-binding oxidoreductase low > 76
Pseudomonas syringae pv. syringae B728a ΔmexB 0.57 Psyr_1755 ABC transporter 0.12 Psyr_2427 gamma-glutamylputrescine oxidase low > 86
Pseudomonas syringae pv. syringae B728a 0.57 Psyr_1755 ABC transporter 0.12 Psyr_2427 gamma-glutamylputrescine oxidase low > 86
Pseudomonas fluorescens FW300-N2C3 0.57 AO356_24450 microcin ABC transporter ATP-binding protein 0.23 AO356_09265 oxidoreductase low > 104
Pseudomonas stutzeri RCH2 0.57 Psest_2064 ABC-type uncharacterized transport system, duplicated ATPase component 0.12 Psest_3795 Glycine/D-amino acid oxidases (deaminating)
Pseudomonas fluorescens FW300-N2E2 0.57 Pf6N2E2_581 Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) 0.13 Pf6N2E2_4388 Gamma-glutamyl-putrescine oxidase (EC1.4.3.-) low > 103
Pseudomonas sp. S08-1 0.56 OH686_03615 ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) / ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) 0.14 OH686_03420 Glycine/D-amino acid (deaminating) low > 80
Rhizobium sp. OAE497 0.56 ABIE40_RS00630 ABC transporter ATP-binding protein 0.13 ABIE40_RS03205 FAD-binding oxidoreductase low > 107
Pseudomonas sp. RS175 0.56 PFR28_01546 putative ABC transporter ATP-binding protein YejF 0.12 PFR28_02805 Gamma-glutamylputrescine oxidoreductase low > 88
Sinorhizobium meliloti 1021 0.56 SMc02829 ABC transporter ATP-binding protein 0.12 SMc00761 oxidoreductase
Pseudomonas fluorescens GW456-L13 0.56 PfGW456L13_3346 Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) 0.32 PfGW456L13_3144 Oxidoreductase low > 87
Bosea sp. OAE506 0.56 ABIE41_RS23985 ABC transporter ATP-binding protein 0.12 ABIE41_RS12125 FAD-binding oxidoreductase low > 77
Azospirillum brasilense Sp245 0.55 AZOBR_RS03800 microcin ABC transporter ATP-binding protein 0.13 AZOBR_RS25655 oxidoreductase low > 97
Pseudomonas putida KT2440 0.55 PP_4150 microcin C transporter - ATP binding subunit 0.30 PP_5370 Oxidoreductase-related protein low > 96
Agrobacterium fabrum C58 0.55 Atu0190 ABC transporter, nucleotide binding/ATPase protein (peptide) 0.23 Atu3958 oxidoreductase low > 89
Pseudomonas fluorescens FW300-N2E3 0.55 AO353_23460 microcin ABC transporter ATP-binding protein 0.13 AO353_20720 gamma-glutamylputrescine oxidoreductase low > 101
Pseudomonas simiae WCS417 0.55 PS417_12190 microcin ABC transporter ATP-binding protein 0.13 PS417_27720 FAD-dependent oxidoreductase low > 88
Dinoroseobacter shibae DFL-12 0.55 Dshi_0658 ABC transporter related (RefSeq) 0.10 Dshi_2227 FAD dependent oxidoreductase (RefSeq) low > 64
Pseudomonas fluorescens SBW25-INTG 0.55 PFLU_RS12880 ABC transporter ATP-binding protein 0.13 PFLU_RS29395 FAD-binding oxidoreductase low > 109
Marinobacter adhaerens HP15 0.55 HP15_1810 peptide ABC transporter, ATP-binding protein 0.12 HP15_944 FAD dependent oxidoreductase low > 73
Pseudomonas fluorescens SBW25 0.55 PFLU_RS12880 ABC transporter ATP-binding protein 0.13 PFLU_RS29395 FAD-binding oxidoreductase low > 109
Phaeobacter inhibens DSM 17395 0.54 PGA1_c30150 oligopeptide/dipeptide ABC transporter, ATP-binding protein 0.13 PGA1_78p00350 FAD dependent oxidoreductase
Rhodopseudomonas palustris CGA009 0.54 TX73_019110 ABC transporter ATP-binding protein 0.10 TX73_013660 FAD-dependent oxidoreductase low > 86
Azospirillum sp. SherDot2 0.53 MPMX19_02171 putative ABC transporter ATP-binding protein YejF 0.23 MPMX19_03255 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC low > 112
Pseudomonas fluorescens FW300-N1B4 0.53 Pf1N1B4_5629 Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) 0.13 Pf1N1B4_6047 Nucleoside-diphosphate-sugar epimerases low > 87
Rhodospirillum rubrum S1H 0.53 Rru_A3169 ABC transporter component (NCBI) 0.11 Rru_A2874 FAD dependent oxidoreductase (NCBI) low > 58
Cupriavidus basilensis FW507-4G11 0.48 RR42_RS13370 microcin ABC transporter ATP-binding protein 0.16 RR42_RS24610 FAD-dependent oxidoreductase low > 128
Ralstonia sp. UNC404CL21Col 0.45 ABZR87_RS10695 ABC transporter ATP-binding protein 0.12 ABZR87_RS05800 FAD-binding oxidoreductase low > 80
Ralstonia solanacearum GMI1000 0.45 RS_RS05865 ABC transporter ATP-binding protein 0.32 RS_RS10600 FAD-binding oxidoreductase low > 80
Paraburkholderia bryophila 376MFSha3.1 0.45 H281DRAFT_00563 microcin C transport system ATP-binding protein 0.28 H281DRAFT_00992 Glycine/D-amino acid oxidase (deaminating) low > 103
Ralstonia solanacearum PSI07 0.45 RPSI07_RS18325 ABC transporter ATP-binding protein 0.08 RPSI07_RS04635 FAD-binding oxidoreductase low > 81
Ralstonia solanacearum IBSBF1503 0.44 RALBFv3_RS15050 ABC transporter ATP-binding protein 0.08 RALBFv3_RS09245 FAD-binding oxidoreductase low > 76
Ralstonia solanacearum UW163 0.44 UW163_RS12520 ABC transporter ATP-binding protein 0.08 UW163_RS04345 FAD-binding oxidoreductase
Paraburkholderia graminis OAS925 0.44 ABIE53_002547 microcin C transport system ATP-binding protein 0.13 ABIE53_004072 gamma-glutamylputrescine oxidase low > 113
Burkholderia phytofirmans PsJN 0.44 BPHYT_RS12370 ABC transporter 0.12 BPHYT_RS23120 FAD-dependent oxidoreductase low > 109
Herbaspirillum seropedicae SmR1 0.44 HSERO_RS17130 ABC transporter 0.09 HSERO_RS05840 FAD-dependent oxidoreductase low > 78
Paraburkholderia sabiae LMG 24235 0.43 QEN71_RS06185 dipeptide ABC transporter ATP-binding protein 0.29 QEN71_RS36350 FAD-dependent oxidoreductase low > 153
Variovorax sp. OAS795 0.42 ABID97_RS16505 dipeptide ABC transporter ATP-binding protein 0.12 ABID97_RS28585 FAD-binding oxidoreductase low > 91
Alteromonas macleodii MIT1002 0.19 MIT1002_02937 Glutathione import ATP-binding protein GsiA 0.10 MIT1002_03149 Gamma-glutamylputrescine oxidoreductase low > 70

Not shown: 8 genomes with orthologs for HER17_RS12935 only; 16 genomes with orthologs for HER17_RS21315 only