Conservation of cofitness between HER17_RS11620 and HER17_RS20070 in Pectobacterium carotovorum WPP14

57 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS11620 NUDIX hydrolase 1.0 HER17_RS20070 PTS IIA-like nitrogen regulatory protein PtsN 0.80 7
Escherichia coli BL21 0.78 ECD_01132 bifunctional thiamine pyrimidine pyrophosphate hydrolase and thiamine pyrophosphate hydrolase 0.81 ECD_03069 sugar-specific enzyme IIA component of PTS — —
Escherichia coli ECRC101 0.78 MCAODC_22335 nudJ phosphatase NudJ 0.81 MCAODC_08450 ptsN PTS IIA-like nitrogen regulatory protein PtsN low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.78 OHPLBJKB_02534 Phosphatase NudJ 0.81 OHPLBJKB_00496 Nitrogen regulatory protein low > 73
Escherichia coli Nissle 1917 0.78 ECOLIN_RS06630 phosphatase NudJ 0.80 ECOLIN_RS18435 PTS IIA-like nitrogen regulatory protein PtsN — —
Escherichia coli ECRC100 0.78 OKFHMN_00750 nudJ phosphatase NudJ 0.81 OKFHMN_17930 ptsN PTS IIA-like nitrogen regulatory protein PtsN low > 80
Escherichia coli BW25113 0.78 b1134 ymfB bifunctional thiamin pyrimidine pyrophosphate hydrolase/ thiamin pyrophosphate hydrolase (NCBI) 0.81 b3204 ptsN sugar-specific enzyme IIA component of PTS (NCBI) low > 76
Escherichia coli ECRC99 0.78 KEDOAH_24835 nudJ phosphatase NudJ 0.81 KEDOAH_10220 ptsN PTS IIA-like nitrogen regulatory protein PtsN — —
Escherichia coli ECOR27 0.78 NOLOHH_20895 nudJ phosphatase NudJ 0.81 NOLOHH_09730 ptsN PTS IIA-like nitrogen regulatory protein PtsN low > 75
Escherichia coli ECOR38 0.78 HEPCGN_24225 nudJ phosphatase NudJ 0.81 HEPCGN_16805 ptsN PTS IIA-like nitrogen regulatory protein PtsN low > 87
Escherichia coli ECRC102 0.78 NIAGMN_24895 nudJ phosphatase NudJ 0.81 NIAGMN_15690 ptsN PTS IIA-like nitrogen regulatory protein PtsN — —
Escherichia fergusonii Becca 0.78 EFB2_02841 Phosphatase NudJ 0.80 EFB2_00619 Nitrogen regulatory protein low > 86
Escherichia coli ECRC98 0.78 JDDGAC_06615 nudJ phosphatase NudJ 0.81 JDDGAC_21555 ptsN PTS IIA-like nitrogen regulatory protein PtsN — —
Escherichia coli ECRC62 0.78 BNILDI_19060 nudJ phosphatase NudJ 0.81 BNILDI_01805 ptsN PTS IIA-like nitrogen regulatory protein PtsN low > 75
Dickeya dadantii 3937 0.77 DDA3937_RS11480 NUDIX hydrolase 0.89 DDA3937_RS01520 PTS IIA-like nitrogen regulatory protein PtsN low > 74
Serratia liquefaciens MT49 0.77 IAI46_10445 NUDIX hydrolase 0.82 IAI46_22480 PTS IIA-like nitrogen regulatory protein PtsN low > 86
Dickeya dianthicola 67-19 0.76 HGI48_RS11525 NUDIX hydrolase 0.90 HGI48_RS01435 PTS IIA-like nitrogen regulatory protein PtsN low > 71
Dickeya dianthicola ME23 0.76 DZA65_RS11860 NUDIX hydrolase 0.90 DZA65_RS01500 PTS IIA-like nitrogen regulatory protein PtsN low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.75 GFF3419 Nudix-like NDP and NTP phosphohydrolase YmfB 0.79 GFF2948 PTS system nitrogen-specific IIA component, PtsN low > 78
Klebsiella michiganensis M5al 0.75 BWI76_RS11320 NUDIX hydrolase 0.82 BWI76_RS25275 PTS IIA-like nitrogen regulatory protein PtsN — —
Enterobacter sp. TBS_079 0.71 MPMX20_01818 Phosphatase NudJ 0.82 MPMX20_04110 Nitrogen regulatory protein low > 85
Erwinia tracheiphila SCR3 0.71 LU632_RS14570 NUDIX hydrolase 0.76 LU632_RS21290 ptsN PTS IIA-like nitrogen regulatory protein PtsN — —
Enterobacter asburiae PDN3 0.71 EX28DRAFT_1796 ADP-ribose pyrophosphatase 0.82 EX28DRAFT_3258 PTS IIA-like nitrogen-regulatory protein PtsN — —
Rahnella sp. WP5 0.71 EX31_RS24580 NUDIX hydrolase 0.81 EX31_RS12390 PTS IIA-like nitrogen regulatory protein PtsN — —
Pantoea sp. MT58 0.65 IAI47_11910 NUDIX hydrolase 0.83 IAI47_17195 PTS IIA-like nitrogen regulatory protein PtsN — —
Shewanella amazonensis SB2B 0.41 Sama_2061 MutT/nudix family protein (RefSeq) 0.46 Sama_3090 nitrogen regulatory IIA protein (RefSeq) low > 62
Shewanella loihica PV-4 0.41 Shew_1561 NUDIX hydrolase (RefSeq) 0.51 Shew_3313 PTS IIA-like nitrogen-regulatory protein PtsN (RefSeq) low > 60
Shewanella sp. ANA-3 0.40 Shewana3_1748 NUDIX hydrolase (RefSeq) 0.50 Shewana3_0670 PTS IIA-like nitrogen-regulatory protein PtsN (RefSeq) low > 73
Shewanella oneidensis MR-1 0.39 SO2631 MutT/nudix family protein (NCBI ptt file) 0.50 SO3963 ptsN nitrogen regulatory IIA protein (NCBI ptt file) low > 76
Dechlorosoma suillum PS 0.33 Dsui_3338 Zn-finger containing NTP pyrophosphohydrolase 0.32 Dsui_0702 PTS IIA-like nitrogen-regulatory protein PtsN — —
Marinobacter adhaerens HP15 0.32 HP15_2085 MutT/nudix family protein 0.41 HP15_2444 PTS IIA-like nitrogen-regulatory protein PtsN — —
Pseudomonas sp. S08-1 0.32 OH686_00215 Nudix-like NDP and NTP phosphohydrolase NudJ 0.34 OH686_08555 PTS IIA-like nitrogen-regulatory protein PtsN — —
Kangiella aquimarina DSM 16071 0.31 B158DRAFT_1838 ADP-ribose pyrophosphatase 0.30 B158DRAFT_2078 PTS IIA-like nitrogen-regulatory protein PtsN low > 40
Ralstonia sp. UNC404CL21Col 0.30 ABZR87_RS01335 NUDIX hydrolase 0.28 ABZR87_RS07050 PTS IIA-like nitrogen regulatory protein PtsN low > 80
Pseudomonas fluorescens GW456-L13 0.29 PfGW456L13_2640 Nudix-like NDP and NTP phosphohydrolase YmfB 0.33 PfGW456L13_5016 PTS IIA-like nitrogen-regulatory protein PtsN — —
Pseudomonas sp. RS175 0.29 PFR28_02618 Phosphatase NudJ 0.35 PFR28_00171 Nitrogen regulatory protein — —
Pseudomonas fluorescens FW300-N2E2 0.29 Pf6N2E2_287 Nudix-like NDP and NTP phosphohydrolase YmfB 0.32 Pf6N2E2_3269 PTS IIA-like nitrogen-regulatory protein PtsN — —
Ralstonia solanacearum IBSBF1503 0.29 RALBFv3_RS05740 NUDIX hydrolase 0.27 RALBFv3_RS11160 PTS IIA-like nitrogen-regulatory protein PtsN — —
Ralstonia solanacearum UW163 0.29 UW163_RS07885 NUDIX hydrolase 0.27 UW163_RS02420 PTS IIA-like nitrogen-regulatory protein PtsN — —
Pseudomonas fluorescens SBW25 0.28 PFLU_RS18575 NUDIX hydrolase 0.35 PFLU_RS04390 PTS IIA-like nitrogen regulatory protein PtsN — —
Pseudomonas fluorescens SBW25-INTG 0.28 PFLU_RS18575 NUDIX hydrolase 0.35 PFLU_RS04390 PTS IIA-like nitrogen regulatory protein PtsN — —
Pseudomonas fluorescens FW300-N1B4 0.28 Pf1N1B4_4049 Nudix-like NDP and NTP phosphohydrolase YmfB 0.33 Pf1N1B4_1082 PTS IIA-like nitrogen-regulatory protein PtsN — —
Pseudomonas fluorescens FW300-N2E3 0.28 AO353_27700 NUDIX hydrolase 0.34 AO353_05190 PTS fructose transporter subunit IIA — —
Burkholderia phytofirmans PsJN 0.28 BPHYT_RS03365 NUDIX hydrolase 0.29 BPHYT_RS02895 PTS sugar transporter subunit IIA — —
Pseudomonas stutzeri RCH2 0.28 Psest_2022 ADP-ribose pyrophosphatase 0.34 Psest_3315 PTS IIA-like nitrogen-regulatory protein PtsN — —
Ralstonia solanacearum PSI07 0.28 RPSI07_RS11560 NUDIX hydrolase 0.27 RPSI07_RS22140 PTS IIA-like nitrogen-regulatory protein PtsN — —
Ralstonia solanacearum GMI1000 0.27 RS_RS13630 NUDIX hydrolase 0.27 RS_RS02010 PTS IIA-like nitrogen-regulatory protein PtsN — —
Acidovorax sp. GW101-3H11 0.27 Ac3H11_4361 NTP pyrophosphohydrolases including oxidative damage repair enzymes 0.28 Ac3H11_682 PTS system nitrogen-specific IIA component, PtsN — —
Variovorax sp. SCN45 0.27 GFF4911 Nudix-like NDP and NTP phosphohydrolase NudJ 0.29 GFF7294 PTS IIA-like nitrogen-regulatory protein PtsN low > 127
Pseudomonas fluorescens FW300-N2C3 0.27 AO356_22115 NUDIX hydrolase 0.33 AO356_07045 PTS fructose transporter subunit IIA — —
Pseudomonas simiae WCS417 0.26 PS417_16535 NUDIX hydrolase 0.33 PS417_04335 PTS fructose transporter subunit IIA — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.26 GFF2602 NTP pyrophosphohydrolases including oxidative damage repair enzymes 0.28 GFF2613 PTS system nitrogen-specific IIA component, PtsN — —
Pseudomonas syringae pv. syringae B728a 0.26 Psyr_3189 NUDIX hydrolase 0.35 Psyr_4149 PTS IIA-like nitrogen-regulatory protein PtsN — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.26 Psyr_3189 NUDIX hydrolase 0.35 Psyr_4149 PTS IIA-like nitrogen-regulatory protein PtsN — —
Variovorax sp. OAS795 0.26 ABID97_RS04420 NUDIX hydrolase 0.28 ABID97_RS04495 PTS sugar transporter subunit IIA — —
Pseudomonas putida KT2440 0.25 PP_4013 MutT/nudix family protein 0.35 PP_0950 phosphotransferase system enzyme IIA, regulation of potassium transport — —
Herbaspirillum seropedicae SmR1 0.24 HSERO_RS03475 NUDIX hydrolase 0.25 HSERO_RS19525 PTS sugar transporter subunit IIA low > 78
Cupriavidus basilensis FW507-4G11 0.23 RR42_RS17470 NUDIX hydrolase 0.27 RR42_RS02075 PTS sugar transporter subunit IIA — —

Not shown: 10 genomes with orthologs for HER17_RS11620 only; 20 genomes with orthologs for HER17_RS20070 only