Conservation of cofitness between HER17_RS10870 and HER17_RS19510 in Pectobacterium carotovorum WPP14

56 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS10870 HTH-type transcriptional regulator CysB 1.0 HER17_RS19510 aspartate carbamoyltransferase 0.95 6
Dickeya dadantii 3937 0.95 DDA3937_RS10540 HTH-type transcriptional regulator CysB 0.92 DDA3937_RS01925 aspartate carbamoyltransferase low > 74
Dickeya dianthicola ME23 0.95 DZA65_RS11020 HTH-type transcriptional regulator CysB 0.91 DZA65_RS01970 aspartate carbamoyltransferase 0.63 35
Dickeya dianthicola 67-19 0.95 HGI48_RS10540 HTH-type transcriptional regulator CysB 0.91 HGI48_RS01900 aspartate carbamoyltransferase low > 71
Serratia liquefaciens MT49 0.93 IAI46_13965 HTH-type transcriptional regulator CysB 0.89 IAI46_02275 aspartate carbamoyltransferase — —
Rahnella sp. WP5 0.93 EX31_RS09890 HTH-type transcriptional regulator CysB 0.88 EX31_RS12785 aspartate carbamoyltransferase 0.89 65
Erwinia tracheiphila SCR3 0.92 LU632_RS12550 cysB HTH-type transcriptional regulator CysB 0.85 LU632_RS20950 pyrB aspartate carbamoyltransferase — —
Klebsiella michiganensis M5al 0.92 BWI76_RS11930 LysR family transcriptional regulator CysB 0.88 BWI76_RS02995 aspartate carbamoyltransferase — —
Escherichia coli ECOR38 0.91 HEPCGN_25600 cysB HTH-type transcriptional regulator CysB 0.88 HEPCGN_10060 pyrB aspartate carbamoyltransferase low > 87
Enterobacter sp. TBS_079 0.91 MPMX20_02501 HTH-type transcriptional regulator CysB 0.88 MPMX20_00544 Aspartate carbamoyltransferase catalytic subunit — —
Escherichia coli BW25113 0.91 b1275 cysB DNA-binding transcriptional dual regulator, O-acetyl-L-serine-binding (NCBI) 0.88 b4245 pyrB aspartate carbamoyltransferase catalytic subunit (NCBI) — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.91 OHPLBJKB_02409 HTH-type transcriptional regulator CysB 0.88 OHPLBJKB_03789 Aspartate carbamoyltransferase catalytic subunit low > 73
Escherichia coli ECRC98 0.91 JDDGAC_05145 cysB HTH-type transcriptional regulator CysB 0.88 JDDGAC_15505 pyrB aspartate carbamoyltransferase — —
Escherichia coli ECRC99 0.91 KEDOAH_26165 cysB HTH-type transcriptional regulator CysB 0.88 KEDOAH_16290 pyrB aspartate carbamoyltransferase — —
Escherichia coli ECOR27 0.91 NOLOHH_20265 cysB HTH-type transcriptional regulator CysB 0.88 NOLOHH_04125 pyrB aspartate carbamoyltransferase — —
Escherichia coli BL21 0.91 ECD_01251 N-acetylserine-responsive cysteine regulon transcriptional activator; autorepressor 0.88 ECD_04113 aspartate carbamoyltransferase, catalytic subunit — —
Escherichia coli ECRC102 0.91 NIAGMN_26770 cysB HTH-type transcriptional regulator CysB 0.88 NIAGMN_09715 pyrB aspartate carbamoyltransferase — —
Escherichia coli ECRC101 0.91 MCAODC_15665 cysB HTH-type transcriptional regulator CysB 0.88 MCAODC_02370 pyrB aspartate carbamoyltransferase — —
Escherichia coli Nissle 1917 0.91 ECOLIN_RS07680 HTH-type transcriptional regulator CysB 0.88 ECOLIN_RS24625 aspartate carbamoyltransferase low > 55
Escherichia fergusonii Becca 0.91 EFB2_02652 HTH-type transcriptional regulator CysB 0.88 EFB2_04288 Aspartate carbamoyltransferase catalytic subunit — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.91 GFF2712 Cys regulon transcriptional activator CysB 0.87 GFF930 Aspartate carbamoyltransferase (EC 2.1.3.2) — —
Escherichia coli ECRC62 0.91 BNILDI_18415 cysB HTH-type transcriptional regulator CysB 0.88 BNILDI_07385 pyrB aspartate carbamoyltransferase — —
Enterobacter asburiae PDN3 0.91 EX28DRAFT_0946 Transcriptional regulator 0.88 EX28DRAFT_3446 aspartate carbamoyltransferase (EC 2.1.3.2) — —
Escherichia coli ECRC100 0.91 OKFHMN_02600 cysB HTH-type transcriptional regulator CysB 0.88 OKFHMN_11865 pyrB aspartate carbamoyltransferase — —
Pantoea sp. MT58 0.90 IAI47_09240 HTH-type transcriptional regulator CysB 0.86 IAI47_16860 aspartate carbamoyltransferase 0.64 67
Vibrio cholerae E7946 ATCC 55056 0.80 CSW01_09545 HTH-type transcriptional regulator CysB 0.73 CSW01_12725 aspartate carbamoyltransferase — —
Alteromonas macleodii MIT1002 0.78 MIT1002_02005 Cys regulon transcriptional activator 0.31 MIT1002_00423 Aspartate carbamoyltransferase catalytic chain — —
Shewanella amazonensis SB2B 0.75 Sama_1324 cysB transcriptional regulator CysB (RefSeq) 0.31 Sama_0840 aspartate carbamoyltransferase (RefSeq) — —
Shewanella oneidensis MR-1 0.75 SO2649 cysB cys regulon transcriptional activator (NCBI ptt file) 0.33 SO1301 pyrB aspartate carbamoyltransferase (NCBI ptt file) 0.80 63
Shewanella loihica PV-4 0.75 Shew_1624 cysB transcriptional regulator CysB (RefSeq) 0.31 Shew_1013 aspartate carbamoyltransferase (RefSeq) — —
Shewanella sp. ANA-3 0.75 Shewana3_1731 cysB transcriptional regulator CysB (RefSeq) 0.33 Shewana3_3070 aspartate carbamoyltransferase (RefSeq) — —
Pseudomonas putida KT2440 0.68 PP_2327 transcriptional dual regulator / CysB-O-acetyl-L-serine 0.21 PP_4998 Aspartate carbamoyltransferase — —
Marinobacter adhaerens HP15 0.68 HP15_1854 transcriptional regulator, LysR family 0.23 HP15_3507 aspartate carbamoyltransferase — —
Pseudomonas fluorescens GW456-L13 0.68 PfGW456L13_2230 Cys regulon transcriptional activator CysB 0.22 PfGW456L13_1016 Aspartate carbamoyltransferase (EC 2.1.3.2) — —
Pseudomonas simiae WCS417 0.68 PS417_08460 CysB family transcriptional regulator 0.22 PS417_26700 aspartate carbamoyltransferase catalytic subunit — —
Pseudomonas fluorescens FW300-N1B4 0.67 Pf1N1B4_283 Cys regulon transcriptional activator CysB 0.22 Pf1N1B4_2347 Aspartate carbamoyltransferase (EC 2.1.3.2) — —
Pseudomonas sp. S08-1 0.67 OH686_01730 Cys regulon transcriptional activator CysB 0.21 OH686_10940 aspartate carbamoyltransferase — —
Pseudomonas fluorescens FW300-N2C3 0.67 AO356_03180 CysB family transcriptional regulator 0.22 AO356_13450 aspartate carbamoyltransferase catalytic subunit — —
Pseudomonas fluorescens SBW25-INTG 0.67 PFLU_RS08410 HTH-type transcriptional regulator CysB 0.21 PFLU_RS28345 aspartate carbamoyltransferase — —
Pseudomonas fluorescens SBW25 0.67 PFLU_RS08410 HTH-type transcriptional regulator CysB 0.21 PFLU_RS28345 aspartate carbamoyltransferase — —
Pseudomonas fluorescens FW300-N2E2 0.67 Pf6N2E2_2465 Cys regulon transcriptional activator CysB 0.22 Pf6N2E2_4606 Aspartate carbamoyltransferase (EC 2.1.3.2) — —
Pseudomonas fluorescens FW300-N2E3 0.67 AO353_19060 CysB family transcriptional regulator 0.22 AO353_08135 aspartate carbamoyltransferase catalytic subunit — —
Pseudomonas sp. RS175 0.67 PFR28_00966 HTH-type transcriptional regulator CysB 0.22 PFR28_04237 Aspartate carbamoyltransferase — —
Pseudomonas syringae pv. syringae B728a 0.66 Psyr_2077 regulatory protein, LysR:LysR, substrate-binding protein 0.21 Psyr_0482 aspartate carbamoyltransferase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.66 Psyr_2077 regulatory protein, LysR:LysR, substrate-binding protein 0.21 Psyr_0482 aspartate carbamoyltransferase — —
Pseudomonas stutzeri RCH2 0.66 Psest_2329 Transcriptional regulator 0.22 Psest_0291 aspartate carbamoyltransferase — —
Dechlorosoma suillum PS 0.52 Dsui_1988 transcriptional regulator 0.21 Dsui_0596 aspartate carbamoyltransferase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.46 GFF5044 Alkanesulfonate utilization operon LysR-family regulator CbI 0.20 GFF651 Aspartate carbamoyltransferase (EC 2.1.3.2) low > 90
Kangiella aquimarina DSM 16071 0.43 B158DRAFT_2455 Transcriptional regulator 0.34 B158DRAFT_0021 aspartate carbamoyltransferase (EC 2.1.3.2) — —
Acidovorax sp. GW101-3H11 0.40 Ac3H11_2403 Alkanesulfonate utilization operon LysR-family regulator CbI 0.20 Ac3H11_3978 Aspartate carbamoyltransferase (EC 2.1.3.2) — —
Rhodanobacter sp. FW510-T8 0.37 OKGIIK_05975 lysR CysB family transcriptional regulator 0.22 OKGIIK_11095 pyrB aspartate carbamoyltransferase catalytic subunit — —
Rhodanobacter denitrificans FW104-10B01 0.36 LRK54_RS00915 LysR substrate-binding domain-containing protein 0.23 LRK54_RS04220 aspartate carbamoyltransferase catalytic subunit — —
Rhodanobacter denitrificans MT42 0.36 LRK55_RS00690 LysR substrate-binding domain-containing protein 0.23 LRK55_RS03990 aspartate carbamoyltransferase catalytic subunit — —
Dyella japonica UNC79MFTsu3.2 0.35 ABZR86_RS05885 LysR substrate-binding domain-containing protein 0.21 ABZR86_RS10390 aspartate carbamoyltransferase catalytic subunit — —
Lysobacter sp. OAE881 0.34 ABIE51_RS15850 LysR family transcriptional regulator 0.22 ABIE51_RS16015 aspartate carbamoyltransferase catalytic subunit low > 62
Xanthomonas campestris pv. campestris strain 8004 0.30 Xcc-8004.1249.1 Transcriptional regulator 0.21 Xcc-8004.1722.1 Aspartate carbamoyltransferase (EC 2.1.3.2) — —
Mucilaginibacter yixingensis YX-36 DSM 26809 0.16 ABZR88_RS05415 LysR substrate-binding domain-containing protein 0.24 ABZR88_RS03460 aspartate carbamoyltransferase catalytic subunit — —

Not shown: 3 genomes with orthologs for HER17_RS10870 only; 38 genomes with orthologs for HER17_RS19510 only