Conservation of cofitness between HER17_RS15875 and HER17_RS15885 in Pectobacterium carotovorum WPP14

57 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS15875 cytochrome o ubiquinol oxidase subunit II 1.0 HER17_RS15885 cytochrome o ubiquinol oxidase subunit III 0.77 6
Dickeya dadantii 3937 0.82 DDA3937_RS05615 cytochrome o ubiquinol oxidase subunit II 0.91 DDA3937_RS05605 cytochrome o ubiquinol oxidase subunit III — —
Dickeya dianthicola 67-19 0.82 HGI48_RS05660 cytochrome o ubiquinol oxidase subunit II 0.91 HGI48_RS05650 cytochrome o ubiquinol oxidase subunit III low > 71
Dickeya dianthicola ME23 0.81 DZA65_RS05985 cytochrome o ubiquinol oxidase subunit II 0.91 DZA65_RS05975 cytochrome o ubiquinol oxidase subunit III 0.39 48
Escherichia coli ECRC62 0.68 BNILDI_22710 cyoA cytochrome o ubiquinol oxidase subunit II 0.81 BNILDI_22720 cyoC cytochrome o ubiquinol oxidase subunit III low > 75
Escherichia coli ECOR27 0.68 NOLOHH_01295 cyoA cytochrome o ubiquinol oxidase subunit II 0.81 NOLOHH_01305 cyoC cytochrome o ubiquinol oxidase subunit III 0.66 39
Escherichia coli HS(pFamp)R (ATCC 700891) 0.68 OHPLBJKB_03241 Cytochrome bo(3) ubiquinol oxidase subunit 2 0.81 OHPLBJKB_03243 Cytochrome bo(3) ubiquinol oxidase subunit 3 0.83 5
Escherichia coli BL21 0.68 ECD_00383 cytochrome o ubiquinol oxidase subunit II 0.81 ECD_00381 cytochrome o ubiquinol oxidase subunit III 0.90 2
Escherichia coli BW25113 0.68 b0432 cyoA cytochrome o ubiquinol oxidase subunit II (NCBI) 0.81 b0430 cyoC cytochrome o ubiquinol oxidase subunit III (NCBI) 0.92 4
Escherichia coli ECOR38 0.68 HEPCGN_06975 cyoA cytochrome o ubiquinol oxidase subunit II 0.81 HEPCGN_06985 cyoC cytochrome o ubiquinol oxidase subunit III 0.69 24
Escherichia coli Nissle 1917 0.68 ECOLIN_RS02595 cytochrome o ubiquinol oxidase subunit II 0.81 ECOLIN_RS02585 cytochrome o ubiquinol oxidase subunit III 0.80 14
Escherichia fergusonii Becca 0.67 EFB2_03625 Cytochrome bo(3) ubiquinol oxidase subunit 2 0.81 EFB2_03627 Cytochrome bo(3) ubiquinol oxidase subunit 3 low > 86
Escherichia coli ECRC99 0.67 KEDOAH_19605 cyoA cytochrome o ubiquinol oxidase subunit II 0.80 KEDOAH_19595 cyoC cytochrome o ubiquinol oxidase subunit III — —
Enterobacter sp. TBS_079 0.67 MPMX20_01023 Cytochrome bo(3) ubiquinol oxidase subunit 2 0.68 MPMX20_01021 Cytochrome bo(3) ubiquinol oxidase subunit 3 0.78 3
Escherichia coli ECRC98 0.67 JDDGAC_12015 cyoA cytochrome o ubiquinol oxidase subunit II 0.80 JDDGAC_12025 cyoC cytochrome o ubiquinol oxidase subunit III low > 86
Klebsiella michiganensis M5al 0.67 BWI76_RS06495 cytochrome ubiquinol oxidase subunit II 0.80 BWI76_RS06485 cytochrome o ubiquinol oxidase subunit III 0.73 2
Escherichia coli ECRC102 0.67 NIAGMN_06415 cyoA cytochrome o ubiquinol oxidase subunit II 0.80 NIAGMN_06425 cyoC cytochrome o ubiquinol oxidase subunit III — —
Escherichia coli ECRC101 0.67 MCAODC_27585 cyoA cytochrome o ubiquinol oxidase subunit II 0.80 MCAODC_27595 cyoC cytochrome o ubiquinol oxidase subunit III 0.66 22
Escherichia coli ECRC100 0.67 OKFHMN_08360 cyoA cytochrome o ubiquinol oxidase subunit II 0.80 OKFHMN_08370 cyoC cytochrome o ubiquinol oxidase subunit III low > 80
Enterobacter asburiae PDN3 0.66 EX28DRAFT_2539 cytochrome o ubiquinol oxidase subunit II 0.76 EX28DRAFT_2541 cytochrome o ubiquinol oxidase, subunit III 0.84 4
Serratia liquefaciens MT49 0.66 IAI46_04985 cytochrome o ubiquinol oxidase subunit II 0.87 IAI46_04975 cytochrome o ubiquinol oxidase subunit III 0.88 1
Pantoea sp. MT58 0.66 IAI47_14680 cytochrome o ubiquinol oxidase subunit II 0.81 IAI47_14690 cytochrome o ubiquinol oxidase subunit III 0.90 3
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.66 GFF4346 Cytochrome O ubiquinol oxidase subunit II (EC 1.10.3.-) 0.81 GFF4344 Cytochrome O ubiquinol oxidase subunit III (EC 1.10.3.-) 0.72 4
Erwinia tracheiphila SCR3 0.65 LU632_RS18375 cyoA cytochrome o ubiquinol oxidase subunit II 0.77 LU632_RS18385 cytochrome o ubiquinol oxidase subunit III — —
Rahnella sp. WP5 0.65 EX31_RS22220 cytochrome o ubiquinol oxidase subunit II 0.84 EX31_RS22210 cytochrome o ubiquinol oxidase subunit III 0.94 4
Pseudomonas syringae pv. syringae B728a ΔmexB 0.56 Psyr_1141 cytochrome bo3 quinol oxidase subunit 2 0.66 Psyr_1143 cytochrome bo3 quinol oxidase subunit 3 — —
Pseudomonas syringae pv. syringae B728a 0.56 Psyr_1141 cytochrome bo3 quinol oxidase subunit 2 0.66 Psyr_1143 cytochrome bo3 quinol oxidase subunit 3 — —
Pseudomonas putida KT2440 0.56 PP_0812 cytochrome bo terminal oxidase subunit II 0.62 PP_0814 cytochrome bo terminal oxidase subunit III — —
Ralstonia solanacearum IBSBF1503 0.54 RALBFv3_RS06660 ubiquinol oxidase subunit II 0.66 RALBFv3_RS06650 cytochrome o ubiquinol oxidase subunit III — —
Ralstonia solanacearum UW163 0.54 UW163_RS06965 ubiquinol oxidase subunit II 0.66 UW163_RS06975 cytochrome o ubiquinol oxidase subunit III — —
Ralstonia solanacearum PSI07 0.54 RPSI07_RS10565 ubiquinol oxidase subunit II 0.66 RPSI07_RS10575 cytochrome o ubiquinol oxidase subunit III — —
Ralstonia sp. UNC404CL21Col 0.54 ABZR87_RS02335 ubiquinol oxidase subunit II 0.64 ABZR87_RS02325 cytochrome o ubiquinol oxidase subunit III 0.78 2
Pseudomonas fluorescens GW456-L13 0.53 PfGW456L13_4936 Cytochrome O ubiquinol oxidase subunit II (EC 1.10.3.-) 0.65 PfGW456L13_4934 Cytochrome O ubiquinol oxidase subunit III (EC 1.10.3.-) 0.95 4
Pseudomonas fluorescens SBW25 0.53 PFLU_RS25220 ubiquinol oxidase subunit II 0.65 PFLU_RS25210 cytochrome o ubiquinol oxidase subunit III 0.94 3
Pseudomonas simiae WCS417 0.53 PS417_23390 ubiquinol oxidase subunit II 0.65 PS417_23380 cytochrome o ubiquinol oxidase subunit III 0.84 4
Pseudomonas fluorescens SBW25-INTG 0.53 PFLU_RS25220 ubiquinol oxidase subunit II 0.65 PFLU_RS25210 cytochrome o ubiquinol oxidase subunit III 0.93 3
Burkholderia phytofirmans PsJN 0.53 BPHYT_RS24915 ubiquinol oxidase subunit II 0.55 BPHYT_RS24925 cytochrome O ubiquinol oxidase low > 109
Pseudomonas fluorescens FW300-N2C3 0.53 AO356_16960 ubiquinol oxidase subunit II 0.65 AO356_16970 cytochrome o ubiquinol oxidase subunit III 0.81 4
Pseudomonas sp. RS175 0.53 PFR28_00242 Cytochrome bo(3) ubiquinol oxidase subunit 2 0.65 PFR28_00244 Cytochrome bo(3) ubiquinol oxidase subunit 3 low > 88
Pseudomonas fluorescens FW300-N2E2 0.53 Pf6N2E2_5317 Cytochrome O ubiquinol oxidase subunit II (EC 1.10.3.-) 0.64 Pf6N2E2_5319 Cytochrome O ubiquinol oxidase subunit III (EC 1.10.3.-) 0.92 3
Pseudomonas fluorescens FW300-N2E3 0.53 AO353_15450 ubiquinol oxidase subunit II 0.65 AO353_15460 cytochrome o ubiquinol oxidase subunit III 0.87 3
Paraburkholderia sabiae LMG 24235 0.52 QEN71_RS15340 ubiquinol oxidase subunit II 0.55 QEN71_RS13330 cytochrome o ubiquinol oxidase subunit III low > 153
Pseudomonas fluorescens FW300-N1B4 0.52 Pf1N1B4_973 Cytochrome O ubiquinol oxidase subunit II (EC 1.10.3.-) 0.66 Pf1N1B4_971 Cytochrome O ubiquinol oxidase subunit III (EC 1.10.3.-) 0.98 2
Alteromonas macleodii MIT1002 0.52 MIT1002_03929 Ubiquinol oxidase subunit 2 precursor 0.59 MIT1002_03927 Cytochrome o ubiquinol oxidase subunit 3 low > 70
Shewanella loihica PV-4 0.51 Shew_0366 ubiquinol oxidase, subunit II (RefSeq) 0.62 Shew_0368 cytochrome c oxidase, subunit III (RefSeq) low > 60
Ralstonia solanacearum GMI1000 0.51 RS_RS14610 ubiquinol oxidase subunit II 0.65 RS_RS14600 cytochrome o ubiquinol oxidase subunit III 0.50 13
Paraburkholderia graminis OAS925 0.49 ABIE53_005340 cytochrome o ubiquinol oxidase subunit 2 0.57 ABIE53_005342 cytochrome o ubiquinol oxidase subunit 3 low > 113
Shewanella sp. ANA-3 0.49 Shewana3_4031 ubiquinol oxidase, subunit II (RefSeq) 0.61 Shewana3_4033 cytochrome c oxidase, subunit III (RefSeq) low > 73
Paraburkholderia bryophila 376MFSha3.1 0.49 H281DRAFT_03426 cytochrome bo3 quinol oxidase subunit 2 (EC 1.10.3.-) 0.55 H281DRAFT_03428 cytochrome bo3 quinol oxidase subunit 3 (EC 1.10.3.-) low > 103
Cupriavidus basilensis FW507-4G11 0.48 RR42_RS32600 cytochrome O ubiquinol oxidase subunit II 0.63 RR42_RS32590 cytochrome o ubiquinol oxidase subunit III 0.55 5
Sinorhizobium meliloti 1021 0.46 SM_b21487 cytochrome o ubiquinol oxidase subunit II 0.57 SM_b21489 cytochrome O ubiquinol oxidase subunit III 0.42 37
Dyella japonica UNC79MFTsu3.2 0.45 ABZR86_RS07625 ubiquinol oxidase subunit II 0.53 ABZR86_RS07615 cytochrome o ubiquinol oxidase subunit III 0.81 3
Caulobacter crescentus NA1000 Δfur 0.45 CCNA_01851 quinol cytochrome oxidase polypeptide II 0.53 CCNA_01849 quinol cytochrome oxidase polypeptide III low > 67
Variovorax sp. SCN45 0.45 GFF5678 Cytochrome O ubiquinol oxidase subunit II (EC 1.10.3.-) 0.55 GFF5676 Cytochrome O ubiquinol oxidase subunit III (EC 1.10.3.-) 0.94 1
Caulobacter crescentus NA1000 0.45 CCNA_01851 quinol cytochrome oxidase polypeptide II 0.53 CCNA_01849 quinol cytochrome oxidase polypeptide III 0.96 2
Acinetobacter radioresistens SK82 0.42 MPMX26_01162 Cytochrome bo(3) ubiquinol oxidase subunit 2 0.57 MPMX26_01160 Cytochrome bo(3) ubiquinol oxidase subunit 3 0.87 5
Acidovorax sp. GW101-3H11 0.42 Ac3H11_3141 Cytochrome O ubiquinol oxidase subunit II (EC 1.10.3.-) 0.54 Ac3H11_3143 Cytochrome O ubiquinol oxidase subunit III (EC 1.10.3.-) — —
Herbaspirillum seropedicae SmR1 0.40 HSERO_RS12320 cytochrome O ubiquinol oxidase 0.54 HSERO_RS12310 cytochrome O ubiquinol oxidase — —

Not shown: 0 genomes with orthologs for HER17_RS15875 only; 21 genomes with orthologs for HER17_RS15885 only