Conservation of cofitness between HER17_RS00785 and HER17_RS11780 in Pectobacterium carotovorum WPP14

46 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS00785 agmatine deiminase 1.0 HER17_RS11780 glucose-6-phosphate dehydrogenase 0.60 19
Dickeya dadantii 3937 0.82 DDA3937_RS00855 agmatine deiminase 0.92 DDA3937_RS10135 glucose-6-phosphate dehydrogenase 0.40 50
Dickeya dianthicola 67-19 0.80 HGI48_RS20520 agmatine deiminase 0.92 HGI48_RS10165 glucose-6-phosphate dehydrogenase low > 71
Dickeya dianthicola ME23 0.79 DZA65_RS21565 agmatine deiminase 0.92 DZA65_RS10580 glucose-6-phosphate dehydrogenase low > 75
Shewanella amazonensis SB2B 0.69 Sama_2521 agmatine deiminase (RefSeq) 0.67 Sama_1812 glucose-6-phosphate 1-dehydrogenase (RefSeq) — —
Shewanella sp. ANA-3 0.68 Shewana3_3465 agmatine deiminase (RefSeq) 0.67 Shewana3_2151 glucose-6-phosphate 1-dehydrogenase (RefSeq) — —
Shewanella oneidensis MR-1 0.68 SO_0887 agmatine deiminase (RefSeq) 0.67 SO2489 zwf glucose-6-phosphate 1-dehydrogenase (NCBI ptt file) low > 76
Rahnella sp. WP5 0.67 EX31_RS21180 agmatine deiminase 0.88 EX31_RS10630 glucose-6-phosphate dehydrogenase — —
Pseudomonas sp. S08-1 0.57 OH686_11505 agmatine deiminase 0.53 OH686_02435 glucose-6-phosphate dehydrogenase low > 80
Pseudomonas fluorescens FW300-N2E3 0.55 AO353_11915 agmatine deiminase 0.53 AO353_03360 glucose-6-phosphate dehydrogenase low > 101
Pseudomonas sp. RS175 0.55 PFR28_04897 Agmatine deiminase 0.51 PFR28_00573 Glucose-6-phosphate 1-dehydrogenase low > 88
Pseudomonas putida KT2440 0.55 PP_0266 Agmatine deiminase 0.51 PP_1022 glucose 6-phosphate-1-dehydrogenase low > 96
Pseudomonas simiae WCS417 0.55 PS417_01340 agmatine deiminase 0.53 PS417_22110 glucose-6-phosphate dehydrogenase — —
Pseudomonas fluorescens FW300-N2E2 0.55 Pf6N2E2_3876 Agmatine deiminase (EC 3.5.3.12) 0.52 Pf6N2E2_2885 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) low > 103
Pseudomonas fluorescens SBW25-INTG 0.55 PFLU_RS01435 agmatine deiminase 0.54 PFLU_RS23725 glucose-6-phosphate dehydrogenase low > 109
Pseudomonas fluorescens SBW25 0.55 PFLU_RS01435 agmatine deiminase 0.54 PFLU_RS23725 glucose-6-phosphate dehydrogenase low > 109
Pseudomonas fluorescens FW300-N2C3 0.55 AO356_10030 Agmatine deiminase (EC 3.5.3.12) (from data) 0.52 AO356_05160 glucose-6-phosphate dehydrogenase low > 104
Pseudomonas fluorescens FW300-N1B4 0.54 Pf1N1B4_1661 Agmatine deiminase (EC 3.5.3.12) 0.53 Pf1N1B4_589 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) — —
Pseudomonas fluorescens GW456-L13 0.54 PfGW456L13_397 Agmatine deiminase (EC 3.5.3.12) 0.53 PfGW456L13_1901 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) low > 87
Pseudomonas syringae pv. syringae B728a 0.54 Psyr_4932 agmatine deiminase 0.52 Psyr_1120 glucose-6-phosphate 1-dehydrogenase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.54 Psyr_4932 agmatine deiminase 0.52 Psyr_1120 glucose-6-phosphate 1-dehydrogenase low > 86
Pseudomonas stutzeri RCH2 0.53 Psest_4291 agmatine deiminase 0.52 Psest_1996 glucose-6-phosphate 1-dehydrogenase low > 67
Azospirillum sp. SherDot2 0.36 MPMX19_04878 Agmatine deiminase 0.46 MPMX19_05119 Glucose-6-phosphate 1-dehydrogenase low > 112
Pedobacter sp. GW460-11-11-14-LB5 0.29 CA265_RS15455 agmatine deiminase 0.37 CA265_RS09810 glucose-6-phosphate dehydrogenase — —
Mucilaginibacter yixingensis YX-36 DSM 26809 0.28 ABZR88_RS18070 agmatine/peptidylarginine deiminase 0.38 ABZR88_RS02975 glucose-6-phosphate dehydrogenase — —
Brevundimonas sp. GW460-12-10-14-LB2 0.27 A4249_RS11140 agmatine deiminase family protein 0.43 A4249_RS10725 glucose-6-phosphate dehydrogenase — —
Caulobacter crescentus NA1000 Δfur 0.26 CCNA_00211 Porphyromonas-type peptidyl-arginine deiminase 0.43 CCNA_02136 glucose-6-phosphate 1-dehydrogenase — —
Caulobacter crescentus NA1000 0.26 CCNA_00211 Porphyromonas-type peptidyl-arginine deiminase 0.43 CCNA_02136 glucose-6-phosphate 1-dehydrogenase — —
Bacteroides stercoris CC31F 0.25 HMPREF1181_RS14245 agmatine deiminase family protein 0.37 HMPREF1181_RS12520 glucose-6-phosphate dehydrogenase low > 56
Variovorax sp. SCN45 0.24 GFF37 Similar to Agmatine deiminase 0.40 GFF5261 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) low > 127
Lysobacter sp. OAE881 0.23 ABIE51_RS09325 agmatine deiminase family protein 0.46 ABIE51_RS01620 glucose-6-phosphate dehydrogenase — —
Bacteroides ovatus ATCC 8483 0.23 BACOVA_02593 hypothetical protein 0.37 BACOVA_00508 glucose-6-phosphate dehydrogenase low > 94
Rhodanobacter sp. FW510-T8 0.23 OKGIIK_06975 Agmatine deiminase 0.47 OKGIIK_14360 zwf glucose-6-phosphate dehydrogenase — —
Dyella japonica UNC79MFTsu3.2 0.23 ABZR86_RS02780 agmatine/peptidylarginine deiminase 0.48 ABZR86_RS14700 glucose-6-phosphate dehydrogenase — —
Parabacteroides merdae CL09T00C40 0.23 HMPREF1078_RS01165 agmatine deiminase family protein 0.32 HMPREF1078_RS08635 glucose-6-phosphate dehydrogenase low > 61
Rhodanobacter denitrificans MT42 0.22 LRK55_RS00025 agmatine deiminase family protein 0.47 LRK55_RS07600 glucose-6-phosphate dehydrogenase — —
Synechococcus elongatus PCC 7942 0.22 Synpcc7942_2402 hypothetical protein 0.39 Synpcc7942_2334 zwf glucose-6-phosphate 1-dehydrogenase low > 38
Rhodanobacter denitrificans FW104-10B01 0.22 LRK54_RS00335 agmatine deiminase family protein 0.47 LRK54_RS07870 glucose-6-phosphate dehydrogenase — —
Marinobacter adhaerens HP15 0.21 HP15_2073 peptidyl-arginine deiminase family protein 0.54 HP15_2179 glucose-6-phosphate 1-dehydrogenase low > 73
Phocaeicola vulgatus CL09T03C04 0.21 HMPREF1058_RS04370 agmatine deiminase family protein 0.34 HMPREF1058_RS18030 glucose-6-phosphate dehydrogenase low > 67
Phocaeicola dorei CL03T12C01 0.20 ABI39_RS16700 agmatine deiminase family protein 0.34 ABI39_RS14355 glucose-6-phosphate dehydrogenase low > 72
Bacteroides thetaiotaomicron VPI-5482 0.20 BT0876 conserved hypothetical protein (NCBI ptt file) 0.37 BT1221 glucose-6-phosphate 1-dehydrogenase (NCBI ptt file) low > 81
Sphingomonas koreensis DSMZ 15582 0.20 Ga0059261_1981 Peptidylarginine deiminase and related enzymes 0.43 Ga0059261_0352 glucose-6-phosphate 1-dehydrogenase — —
Xanthomonas campestris pv. campestris strain 8004 0.20 Xcc-8004.2375.1 Agmatine deiminase (EC 3.5.3.12) 0.33 Xcc-8004.5069.1 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) — —
Alteromonas macleodii MIT1002 0.19 MIT1002_03760 Putative agmatine deiminase 0.62 MIT1002_02407 Glucose-6-phosphate 1-dehydrogenase low > 70
Serratia liquefaciens MT49 0.19 IAI46_12735 agmatine deiminase family protein 0.91 IAI46_14575 glucose-6-phosphate dehydrogenase — —
Phaeobacter inhibens DSM 17395 0.18 PGA1_c26490 putative agmatine deiminase 0.39 PGA1_c27990 glucose-6-phosphate 1-dehydrogenase — —

Not shown: 3 genomes with orthologs for HER17_RS00785 only; 44 genomes with orthologs for HER17_RS11780 only