Conservation of cofitness between PS417_23250 and PS417_00335 in Pseudomonas simiae WCS417

39 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_23250 S-adenosylmethionine tRNA ribosyltransferase 1.0 PS417_00335 cytochrome B561 0.40 10
Pseudomonas fluorescens SBW25 0.99 PFLU_RS24905 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA 0.99 PFLU_RS00325 heme A synthase low > 109
Pseudomonas fluorescens SBW25-INTG 0.99 PFLU_RS24905 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA 0.99 PFLU_RS00325 heme A synthase low > 109
Pseudomonas fluorescens FW300-N1B4 0.94 Pf1N1B4_3005 S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-) 0.78 Pf1N1B4_1861 Heme A synthase, cytochrome oxidase biogenesis protein Cox15-CtaA low > 87
Pseudomonas fluorescens FW300-N2E3 0.94 AO353_15785 S-adenosylmethionine:tRNA ribosyltransferase-isomerase 0.77 AO353_10865 cytochrome B low > 101
Pseudomonas fluorescens GW456-L13 0.93 PfGW456L13_4883 S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-) 0.77 PfGW456L13_607 Heme A synthase, cytochrome oxidase biogenesis protein Cox15-CtaA low > 87
Pseudomonas fluorescens FW300-N2C3 0.91 AO356_06695 S-adenosylmethionine:tRNA ribosyltransferase-isomerase 0.76 AO356_11195 cytochrome B low > 104
Pseudomonas fluorescens FW300-N2E2 0.91 Pf6N2E2_3199 S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-) 0.76 Pf6N2E2_4105 Heme A synthase, cytochrome oxidase biogenesis protein Cox15-CtaA low > 103
Pseudomonas sp. RS175 0.91 PFR28_00276 S-adenosylmethionine:tRNA ribosyltransferase-isomerase 0.73 PFR28_04684 Heme A synthase low > 88
Pseudomonas putida KT2440 0.89 PP_0832 S-adenosylmethionine:tRNA ribosyltransferase-isomerase 0.59 PP_0109 conserved membrane protein of unknown function low > 96
Pseudomonas sp. S08-1 0.85 OH686_17425 S-adenosylmethionine:tRNA ribosyltransferase-isomerase 0.50 OH686_12290 Heme A synthase, cytochrome oxidase biogenesis protein Cox15-CtaA low > 80
Pseudomonas stutzeri RCH2 0.85 Psest_1241 S-adenosylmethionine:tRNA ribosyltransferase-isomerase 0.47 Psest_4333 Uncharacterized protein required for cytochrome oxidase assembly low > 67
Shewanella oneidensis MR-1 0.73 SO3114 queA S-adenosylmethionine:tRNA ribosyltransferase-isomerase (NCBI ptt file) 0.35 SO4613 cytochrome oxidase assembly protein, putative (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.73 Shewana3_1434 queA S-adenosylmethionine:tRNA ribosyltransferase-isomerase (RefSeq) 0.30 Shewana3_3997 cytochrome oxidase assembly (RefSeq) low > 73
Shewanella loihica PV-4 0.73 Shew_2338 S-adenosylmethionine--tRNA-ribosyltransferase-isomerase (RefSeq) 0.35 Shew_0118 cytochrome oxidase assembly (RefSeq) — —
Shewanella amazonensis SB2B 0.72 Sama_2194 queA S-adenosylmethionine:tRNA ribosyltransferase-isomerase (RefSeq) 0.31 Sama_3490 cytochrome oxidase assembly (RefSeq) low > 62
Alteromonas macleodii MIT1002 0.64 MIT1002_02814 S-adenosylmethionine:tRNA ribosyltransferase-isomerase 0.37 MIT1002_04028 Cytochrome oxidase assembly protein low > 70
Kangiella aquimarina DSM 16071 0.62 B158DRAFT_2515 S-adenosylmethionine:tRNA ribosyltransferase-isomerase 0.38 B158DRAFT_0670 Uncharacterized protein required for cytochrome oxidase assembly low > 40
Herbaspirillum seropedicae SmR1 0.55 HSERO_RS06170 S-adenosylmethionine tRNA ribosyltransferase 0.29 HSERO_RS20750 cytochrome C oxidase subunit I low > 78
Ralstonia solanacearum GMI1000 0.55 RS_RS13570 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA 0.31 RS_RS01825 heme A synthase low > 80
Ralstonia sp. UNC404CL21Col 0.55 ABZR87_RS01275 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA 0.31 ABZR87_RS06840 COX15/CtaA family protein low > 80
Ralstonia solanacearum PSI07 0.54 RPSI07_RS11620 S-adenosylmethionine:tRNA ribosyltransferase-isomerase 0.33 RPSI07_RS22320 heme A synthase low > 81
Castellaniella sp019104865 MT123 0.54 ABCV34_RS15370 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA 0.29 ABCV34_RS13235 COX15/CtaA family protein low > 48
Ralstonia solanacearum UW163 0.54 UW163_RS07945 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA 0.31 UW163_RS02595 heme A synthase — —
Ralstonia solanacearum IBSBF1503 0.54 RALBFv3_RS05680 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA 0.31 RALBFv3_RS10985 heme A synthase low > 76
Cupriavidus basilensis FW507-4G11 0.54 RR42_RS17395 S-adenosylmethionine tRNA ribosyltransferase 0.29 RR42_RS01915 cytochrome C oxidase subunit I low > 128
Xanthomonas campestris pv. campestris strain 8004 0.53 Xcc-8004.2167.1 S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-) 0.29 Xcc-8004.4838.1 Heme A synthase, cytochrome oxidase biogenesis protein Cox15-CtaA low > 74
Rhodanobacter denitrificans MT42 0.53 LRK55_RS02885 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA 0.29 LRK55_RS06830 COX15/CtaA family protein low > 63
Lysobacter sp. OAE881 0.52 ABIE51_RS15025 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA 0.29 ABIE51_RS19170 COX15/CtaA family protein 0.37 22
Variovorax sp. OAS795 0.52 ABID97_RS01590 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA 0.25 ABID97_RS23920 COX15/CtaA family protein low > 91
Rhodanobacter denitrificans FW104-10B01 0.52 LRK54_RS03135 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA 0.29 LRK54_RS07090 COX15/CtaA family protein low > 59
Rhodanobacter sp. FW510-T8 0.51 OKGIIK_10005 queA tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA 0.31 OKGIIK_16550 ctaA heme A synthase low > 52
Dyella japonica UNC79MFTsu3.2 0.51 ABZR86_RS09545 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA 0.33 ABZR86_RS12900 heme A synthase low > 74
Variovorax sp. SCN45 0.50 GFF5535 S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 2.4.99.17) 0.26 GFF2306 Heme A synthase, cytochrome oxidase biogenesis protein Cox15-CtaA low > 127
Acidovorax sp. GW101-3H11 0.49 Ac3H11_778 S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-) 0.31 Ac3H11_3884 Heme A synthase, cytochrome oxidase biogenesis protein Cox15-CtaA low > 79
Burkholderia phytofirmans PsJN 0.49 BPHYT_RS03405 S-adenosylmethionine:tRNA ribosyltransferase-isomerase 0.29 BPHYT_RS02685 cytochrome C oxidase subunit I 0.37 24
Paraburkholderia sabiae LMG 24235 0.49 QEN71_RS26635 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA 0.30 QEN71_RS01540 COX15/CtaA family protein low > 153
Hydrogenophaga sp. GW460-11-11-14-LB1 0.49 GFF2801 S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-) 0.29 GFF697 Heme A synthase, cytochrome oxidase biogenesis protein Cox15-CtaA low > 90
Paraburkholderia graminis OAS925 0.49 ABIE53_000832 S-adenosylmethionine:tRNA ribosyltransferase-isomerase 0.29 ABIE53_000682 cytochrome c oxidase assembly protein subunit 15 low > 113
Paraburkholderia bryophila 376MFSha3.1 0.49 H281DRAFT_04671 S-adenosylmethionine:tRNA ribosyltransferase-isomerase 0.29 H281DRAFT_01986 cytochrome c oxidase assembly protein subunit 15 0.58 19

Not shown: 60 genomes with orthologs for PS417_23250 only; 0 genomes with orthologs for PS417_00335 only