| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas simiae WCS417 | 1.0 | PS417_16375 | | 2-hydroxyacid dehydrogenase | 1.0 | PS417_02975 | | 3-dehydroquinate dehydratase | 0.30 | 17 |
| Pseudomonas fluorescens SBW25 | 0.97 | PFLU_RS18415 | | 2-hydroxyacid dehydrogenase | 0.99 | PFLU_RS03050 | | type II 3-dehydroquinate dehydratase | — | — |
| Pseudomonas fluorescens SBW25-INTG | 0.97 | PFLU_RS18415 | | 2-hydroxyacid dehydrogenase | 0.99 | PFLU_RS03050 | | type II 3-dehydroquinate dehydratase | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.88 | Pf1N1B4_3500 | | D-lactate dehydrogenase (EC 1.1.1.28) | 0.92 | Pf1N1B4_1307 | | 3-dehydroquinate dehydratase II (EC 4.2.1.10) | low | > 87 |
| Pseudomonas fluorescens FW300-N2E2 | 0.87 | Pf6N2E2_5719 | | D-lactate dehydrogenase (EC 1.1.1.28) | 0.92 | Pf6N2E2_3510 | | 3-dehydroquinate dehydratase II (EC 4.2.1.10) | — | — |
| Pseudomonas fluorescens FW300-N2E3 | 0.87 | AO353_02740 | | hydroxyacid dehydrogenase | 0.92 | AO353_13685 | | 3-dehydroquinate dehydratase | low | > 101 |
| Pseudomonas fluorescens FW300-N2C3 | 0.87 | AO356_19040 | | hydroxyacid dehydrogenase | 0.94 | AO356_08185 | | 3-dehydroquinate dehydratase | — | — |
| Pseudomonas sp. RS175 | 0.86 | PFR28_03228 | | D-lactate dehydrogenase | 0.92 | PFR28_05222 | | 3-dehydroquinate dehydratase 1 | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.83 | PfGW456L13_2028 | | D-lactate dehydrogenase (EC 1.1.1.28) | 0.93 | PfGW456L13_50 | | 3-dehydroquinate dehydratase II (EC 4.2.1.10) | low | > 87 |
| Pseudomonas putida KT2440 | 0.80 | PP_1649 | | D-lactate dehydrogenase | 0.89 | PP_0560 | | 3-dehydroquinate dehydratase 1, type II | — | — |
| Pseudomonas stutzeri RCH2 | 0.74 | Psest_4064 | | Lactate dehydrogenase and related dehydrogenases | 0.87 | Psest_1021 | | 3-dehydroquinate dehydratase, type II | — | — |
| Pseudomonas sp. S08-1 | 0.70 | OH686_18940 | | D-lactate dehydrogenase | 0.92 | OH686_07585 | | 3-dehydroquinate dehydratase, type II | low | > 80 |
| Ralstonia solanacearum UW163 | 0.70 | UW163_RS05795 | | 2-hydroxyacid dehydrogenase | 0.64 | UW163_RS07640 | | type II 3-dehydroquinate dehydratase | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.70 | RALBFv3_RS07830 | | 2-hydroxyacid dehydrogenase | 0.64 | RALBFv3_RS05985 | | type II 3-dehydroquinate dehydratase | — | — |
| Ralstonia sp. UNC404CL21Col | 0.68 | ABZR87_RS03505 | | 2-hydroxyacid dehydrogenase | 0.63 | ABZR87_RS01645 | | type II 3-dehydroquinate dehydratase | low | > 80 |
| Ralstonia solanacearum GMI1000 | 0.67 | RS_RS15730 | | 2-hydroxyacid dehydrogenase | 0.62 | RS_RS13930 | | 3-dehydroquinate dehydratase 1 | — | — |
| Ralstonia solanacearum PSI07 | 0.66 | RPSI07_RS09445 | | 2-hydroxyacid dehydrogenase | 0.63 | RPSI07_RS11260 | | type II 3-dehydroquinate dehydratase | low | > 81 |
| Burkholderia phytofirmans PsJN | 0.65 | BPHYT_RS03835 | | D-lactate dehydrogenase | 0.65 | BPHYT_RS17005 | | 3-dehydroquinate dehydratase | — | — |
| Paraburkholderia bryophila 376MFSha3.1 | 0.65 | H281DRAFT_04746 | | D-lactate dehydrogenase | 0.65 | H281DRAFT_06285 | | 3-dehydroquinate dehydratase | low | > 103 |
| Paraburkholderia graminis OAS925 | 0.65 | ABIE53_000908 | | D-lactate dehydrogenase | 0.65 | ABIE53_003566 | | 3-dehydroquinate dehydratase-2 | low | > 113 |
| Paraburkholderia sabiae LMG 24235 | 0.64 | QEN71_RS26130 | | 2-hydroxyacid dehydrogenase | 0.61 | QEN71_RS27160 | | type II 3-dehydroquinate dehydratase | low | > 153 |
| Shewanella sp. ANA-3 | 0.57 | Shewana3_3319 | | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (RefSeq) | 0.58 | Shewana3_0511 | | 3-dehydroquinate dehydratase (RefSeq) | low | > 73 |
| Shewanella oneidensis MR-1 | 0.56 | SO0968 | ldhA | D-lactate dehydrogenase (NCBI ptt file) | 0.58 | SO0512 | aroQ | 3-dehydroquinate dehydratase, type II (NCBI ptt file) | low | > 76 |
| Synechococcus elongatus PCC 7942 | 0.55 | Synpcc7942_1347 | ldhA | 2-hydroxyacid dehydrogenase-like | 0.52 | Synpcc7942_0915 | aroQ | 3-dehydroquinate dehydratase | — | — |
| Shewanella amazonensis SB2B | 0.55 | Sama_0612 | | D-lactate dehydrogenase (RefSeq) | 0.60 | Sama_3194 | | 3-dehydroquinate dehydratase (RefSeq) | low | > 62 |
| Shewanella loihica PV-4 | 0.55 | Shew_0787 | | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (RefSeq) | 0.61 | Shew_3363 | | 3-dehydroquinate dehydratase, type II (RefSeq) | low | > 60 |
| Vibrio cholerae E7946 ATCC 55056 | 0.54 | CSW01_14945 | | 2-hydroxyacid dehydrogenase | 0.62 | CSW01_01515 | | type II 3-dehydroquinate dehydratase | low | > 62 |
| Enterobacter asburiae PDN3 | 0.52 | EX28DRAFT_1435 | | Lactate dehydrogenase and related dehydrogenases | 0.63 | EX28DRAFT_3306 | | 3-dehydroquinate dehydratase (EC 4.2.1.10) | — | — |
| Enterobacter sp. TBS_079 | 0.52 | MPMX20_02132 | | D-lactate dehydrogenase | 0.63 | MPMX20_04162 | | 3-dehydroquinate dehydratase | low | > 85 |
| Pantoea sp. MT58 | 0.51 | IAI47_09495 | | 2-hydroxyacid dehydrogenase | 0.59 | IAI47_02415 | | type II 3-dehydroquinate dehydratase | — | — |
| Herbaspirillum seropedicae SmR1 | 0.51 | HSERO_RS12550 | | D-lactate dehydrogenase | 0.51 | HSERO_RS01935 | | 3-dehydroquinate dehydratase | low | > 78 |
| Echinicola vietnamensis KMM 6221, DSM 17526 | 0.51 | Echvi_3161 | | Lactate dehydrogenase and related dehydrogenases | 0.42 | Echvi_1810 | | 3-dehydroquinate dehydratase, type II | — | — |
| Serratia liquefaciens MT49 | 0.50 | IAI46_13355 | | 2-hydroxyacid dehydrogenase | 0.58 | IAI46_22745 | | type II 3-dehydroquinate dehydratase | — | — |
| Dickeya dadantii 3937 | 0.49 | DDA3937_RS12295 | | 2-hydroxyacid dehydrogenase | 0.55 | DDA3937_RS01405 | | type II 3-dehydroquinate dehydratase | — | — |
| Alteromonas macleodii MIT1002 | 0.49 | MIT1002_01974 | | D-lactate dehydrogenase | 0.62 | MIT1002_03941 | | 3-dehydroquinate dehydratase | — | — |
| Rahnella sp. WP5 | 0.49 | EX31_RS06470 | | 2-hydroxyacid dehydrogenase | 0.58 | EX31_RS12215 | | type II 3-dehydroquinate dehydratase | low | > 89 |
| Pectobacterium carotovorum WPP14 | 0.47 | HER17_RS09630 | | 2-hydroxyacid dehydrogenase | 0.57 | HER17_RS20195 | | type II 3-dehydroquinate dehydratase | low | > 75 |
| Bacteroides thetaiotaomicron VPI-5482 | 0.46 | BT1575 | | putative dehydrogenase (NCBI ptt file) | 0.45 | BT2842 | | 3-dehydroquinate dehydratase (NCBI ptt file) | — | — |
| Bacteroides ovatus ATCC 8483 | 0.46 | BACOVA_04316 | | 4-phosphoerythronate dehydrogenase | 0.46 | BACOVA_02122 | | 3-dehydroquinate dehydratase, type II | low | > 94 |
| Phocaeicola vulgatus CL09T03C04 | 0.45 | HMPREF1058_RS16545 | | 2-hydroxyacid dehydrogenase | 0.45 | HMPREF1058_RS09675 | | type II 3-dehydroquinate dehydratase | low | > 67 |
| Phocaeicola dorei CL03T12C01 | 0.44 | ABI39_RS12465 | | 2-hydroxyacid dehydrogenase | 0.45 | ABI39_RS07005 | | type II 3-dehydroquinate dehydratase | low | > 72 |
| Parabacteroides merdae CL09T00C40 | 0.44 | HMPREF1078_RS01675 | | 2-hydroxyacid dehydrogenase | 0.43 | HMPREF1078_RS04700 | | type II 3-dehydroquinate dehydratase | low | > 61 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.41 | ABZR88_RS05620 | | 2-hydroxyacid dehydrogenase | 0.45 | ABZR88_RS10225 | | type II 3-dehydroquinate dehydratase | — | — |
Not shown: 22 genomes with orthologs for PS417_16375 only; 21 genomes with orthologs for PS417_02975 only