Conservation of cofitness between PS417_18575 and PS417_27305 in Pseudomonas simiae WCS417

58 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_18575 aspartate-semialdehyde dehydrogenase 1.0 PS417_27305 5-formyltetrahydrofolate cyclo-ligase 0.23 4
Pseudomonas fluorescens SBW25-INTG 0.94 PFLU_RS20555 aspartate-semialdehyde dehydrogenase 0.93 PFLU_RS28965 5-formyltetrahydrofolate cyclo-ligase low > 109
Pseudomonas fluorescens SBW25 0.94 PFLU_RS20555 aspartate-semialdehyde dehydrogenase 0.93 PFLU_RS28965 5-formyltetrahydrofolate cyclo-ligase low > 109
Pseudomonas fluorescens FW300-N2E2 0.81 Pf6N2E2_68 Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) 0.73 Pf6N2E2_4476 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) low > 103
Pseudomonas sp. RS175 0.81 PFR28_02819 USG-1 protein 0.75 PFR28_04325 5-formyltetrahydrofolate cyclo-ligase low > 88
Pseudomonas fluorescens FW300-N2C3 0.80 AO356_21425 aspartate-semialdehyde dehydrogenase 0.73 AO356_12990 5-formyltetrahydrofolate cyclo-ligase low > 104
Pseudomonas fluorescens GW456-L13 0.80 PfGW456L13_3943 Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) 0.81 PfGW456L13_892 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) low > 87
Pseudomonas fluorescens FW300-N2E3 0.80 AO353_20645 aspartate-semialdehyde dehydrogenase 0.82 AO353_08780 5-formyltetrahydrofolate cyclo-ligase low > 101
Pseudomonas fluorescens FW300-N1B4 0.79 Pf1N1B4_10 Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) 0.81 Pf1N1B4_2225 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) low > 87
Pseudomonas syringae pv. syringae B728a 0.67 Psyr_1660 Aspartate-semialdehyde dehydrogenase 0.74 Psyr_0317 5-formyltetrahydrofolate cyclo-ligase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.67 Psyr_1660 Aspartate-semialdehyde dehydrogenase 0.74 Psyr_0317 5-formyltetrahydrofolate cyclo-ligase low > 86
Pseudomonas putida KT2440 0.66 PP_1992 aspartate-semialdehyde dehydrogenase 0.67 PP_5203 5-formyltetrahydrofolate cyclo-ligase low > 96
Pseudomonas sp. S08-1 0.58 OH686_04460 Aspartate-semialdehyde dehydrogenase 0.57 OH686_11225 5-formyltetrahydrofolate cyclo-ligase low > 80
Pseudomonas stutzeri RCH2 0.48 Psest_2587 Aspartate-semialdehyde dehydrogenase 0.64 Psest_0170 5,10-methenyltetrahydrofolate synthetase low > 67
Shewanella amazonensis SB2B 0.40 Sama_2152 aspartate-semialdehyde dehydrogenase (RefSeq) 0.29 Sama_2726 5-formyltetrahydrofolate cyclo-ligase family protein (RefSeq) — —
Shewanella loihica PV-4 0.40 Shew_2308 aspartate-semialdehyde dehydrogenase (RefSeq) 0.33 Shew_3069 5-formyltetrahydrofolate cyclo-ligase (RefSeq) — —
Vibrio cholerae E7946 ATCC 55056 0.39 CSW01_10520 Aspartate-semialdehyde dehydrogenase 2 0.32 CSW01_12545 5-formyltetrahydrofolate cyclo-ligase low > 62
Shewanella oneidensis MR-1 0.39 SO3070 asd aspartate semialdehyde dehydrogenese (NCBI ptt file) 0.32 SO0774 5-formyltetrahydrofolate cyclo-ligase family protein (NCBI ptt file) — —
Shewanella sp. ANA-3 0.39 Shewana3_1477 aspartate semialdehyde dehydrogenase (RefSeq) 0.32 Shewana3_3506 5-formyltetrahydrofolate cyclo-ligase (RefSeq) — —
Xanthomonas campestris pv. campestris strain 8004 0.38 Xcc-8004.1957.1 Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) 0.22 Xcc-8004.1138.1 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) — —
Kangiella aquimarina DSM 16071 0.37 B158DRAFT_1481 aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) 0.26 B158DRAFT_0528 5-formyltetrahydrofolate cyclo-ligase — —
Lysobacter sp. OAE881 0.37 ABIE51_RS08235 aspartate-semialdehyde dehydrogenase 0.22 ABIE51_RS17355 5-formyltetrahydrofolate cyclo-ligase — —
Rhodanobacter denitrificans FW104-10B01 0.36 LRK54_RS01715 aspartate-semialdehyde dehydrogenase 0.26 LRK54_RS11670 5-formyltetrahydrofolate cyclo-ligase — —
Rhodanobacter denitrificans MT42 0.35 LRK55_RS01495 aspartate-semialdehyde dehydrogenase 0.26 LRK55_RS11395 5-formyltetrahydrofolate cyclo-ligase — —
Rhodanobacter sp. FW510-T8 0.35 OKGIIK_04815 asd aspartate-semialdehyde dehydrogenase 0.27 OKGIIK_12225 5-formyltetrahydrofolate cyclo-ligase — —
Dyella japonica UNC79MFTsu3.2 0.35 ABZR86_RS08030 aspartate-semialdehyde dehydrogenase 0.23 ABZR86_RS11995 5-formyltetrahydrofolate cyclo-ligase — —
Klebsiella michiganensis M5al 0.34 BWI76_RS20385 aspartate-semialdehyde dehydrogenase 0.30 BWI76_RS23915 5-formyltetrahydrofolate cyclo-ligase low > 92
Serratia liquefaciens MT49 0.34 IAI46_17845 aspartate-semialdehyde dehydrogenase 0.34 IAI46_20895 5-formyltetrahydrofolate cyclo-ligase low > 86
Enterobacter sp. TBS_079 0.34 MPMX20_03254 USG-1 protein 0.32 MPMX20_03770 5-formyltetrahydrofolate cyclo-ligase low > 85
Escherichia coli BL21 0.34 ECD_02244 putative semialdehyde dehydrogenase 0.31 ECD_02743 5-formyltetrahydrofolate cyclo-ligase family protein low > 60
Escherichia coli ECRC99 0.34 KEDOAH_05530 usg aspartate-semialdehyde dehydrogenase 0.34 KEDOAH_08655 ygfA 5-formyltetrahydrofolate cyclo-ligase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.34 OHPLBJKB_01386 USG-1 protein 0.31 OHPLBJKB_00804 5-formyltetrahydrofolate cyclo-ligase low > 73
Escherichia coli Nissle 1917 0.34 ECOLIN_RS13440 aspartate-semialdehyde dehydrogenase 0.33 ECOLIN_RS16205 5-formyltetrahydrofolate cyclo-ligase low > 52
Escherichia coli ECRC62 0.34 BNILDI_13220 usg aspartate-semialdehyde dehydrogenase 0.34 BNILDI_09930 ygfA 5-formyltetrahydrofolate cyclo-ligase — —
Escherichia fergusonii Becca 0.34 EFB2_01539 USG-1 protein 0.34 EFB2_00991 5-formyltetrahydrofolate cyclo-ligase low > 86
Dickeya dadantii 3937 0.34 DDA3937_RS14470 aspartate-semialdehyde dehydrogenase 0.31 DDA3937_RS02410 5-formyltetrahydrofolate cyclo-ligase low > 74
Escherichia coli ECOR38 0.34 HEPCGN_21870 usg aspartate-semialdehyde dehydrogenase 0.34 HEPCGN_18775 ygfA 5-formyltetrahydrofolate cyclo-ligase low > 85
Escherichia coli BW25113 0.34 b2319 usg hypothetical protein (NCBI) 0.31 b2912 ygfA putative ligase (VIMSS) low > 76
Escherichia coli ECOR27 0.34 NOLOHH_14300 usg aspartate-semialdehyde dehydrogenase 0.34 NOLOHH_11395 ygfA 5-formyltetrahydrofolate cyclo-ligase — —
Escherichia coli ECRC102 0.33 NIAGMN_20440 usg aspartate-semialdehyde dehydrogenase 0.34 NIAGMN_17250 ygfA 5-formyltetrahydrofolate cyclo-ligase — —
Escherichia coli ECRC98 0.33 JDDGAC_26625 usg aspartate-semialdehyde dehydrogenase 0.34 JDDGAC_23125 ygfA 5-formyltetrahydrofolate cyclo-ligase — —
Escherichia coli ECRC101 0.33 MCAODC_13705 usg aspartate-semialdehyde dehydrogenase 0.34 MCAODC_10005 ygfA 5-formyltetrahydrofolate cyclo-ligase — —
Escherichia coli ECRC101 0.33 OKFHMN_22665 usg aspartate-semialdehyde dehydrogenase 0.34 OKFHMN_19485 ygfA 5-formyltetrahydrofolate cyclo-ligase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.33 GFF1935 Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) 0.30 GFF3012 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) low > 78
Desulfovibrio vulgaris Miyazaki F 0.33 DvMF_2382 aspartate-semialdehyde dehydrogenase (RefSeq) 0.17 DvMF_2318 5-formyltetrahydrofolate cyclo-ligase (RefSeq) — —
Agrobacterium fabrum C58 0.33 Atu2490 aspartate-semialdehyde dehydrogenase 0.19 Atu3731 5-formyltetrahydrofolate cyclo-ligase — —
Dickeya dianthicola ME23 0.33 DZA65_RS15375 aspartate-semialdehyde dehydrogenase 0.32 DZA65_RS02475 5-formyltetrahydrofolate cyclo-ligase low > 75
Dickeya dianthicola 67-19 0.33 HGI48_RS14440 aspartate-semialdehyde dehydrogenase 0.30 HGI48_RS02370 5-formyltetrahydrofolate cyclo-ligase — —
Rahnella sp. WP5 0.33 EX31_RS19605 aspartate-semialdehyde dehydrogenase 0.33 EX31_RS21480 5-formyltetrahydrofolate cyclo-ligase low > 89
Sinorhizobium meliloti 1021 0.32 SMc04410 aspartate-semialdehyde dehydrogenase 0.16 SMc03974 hypothetical protein — —
Pectobacterium carotovorum WPP14 0.32 HER17_RS06985 aspartate-semialdehyde dehydrogenase 0.36 HER17_RS19095 5-formyltetrahydrofolate cyclo-ligase low > 75
Erwinia tracheiphila SCR3 0.31 LU632_RS07820 aspartate-semialdehyde dehydrogenase 0.30 LU632_RS05860 5-formyltetrahydrofolate cyclo-ligase — —
Bosea sp. OAE506 0.31 ABIE41_RS08445 aspartate-semialdehyde dehydrogenase 0.16 ABIE41_RS09445 5-formyltetrahydrofolate cyclo-ligase — —
Enterobacter asburiae PDN3 0.31 EX28DRAFT_0285 Aspartate-semialdehyde dehydrogenase 0.29 EX28DRAFT_2964 5,10-methenyltetrahydrofolate synthetase low > 76
Rhizobium sp. OAE497 0.31 ABIE40_RS19095 aspartate-semialdehyde dehydrogenase 0.17 ABIE40_RS15645 5-formyltetrahydrofolate cyclo-ligase — —
Pantoea sp. MT58 0.31 IAI47_06240 aspartate-semialdehyde dehydrogenase 0.31 IAI47_03730 5-formyltetrahydrofolate cyclo-ligase low > 76
Magnetospirillum magneticum AMB-1 0.30 AMB_RS03035 aspartate-semialdehyde dehydrogenase 0.16 AMB_RS16280 5-formyltetrahydrofolate cyclo-ligase — —
Caulobacter crescentus NA1000 Δfur 0.30 CCNA_00253 aspartate-semialdehyde dehydrogenase 0.19 CCNA_03354 5-formyltetrahydrofolate cyclo-ligase low > 67
Caulobacter crescentus NA1000 0.30 CCNA_00253 aspartate-semialdehyde dehydrogenase 0.19 CCNA_03354 5-formyltetrahydrofolate cyclo-ligase low > 66

Not shown: 22 genomes with orthologs for PS417_18575 only; 10 genomes with orthologs for PS417_27305 only