Conservation of cofitness between PS417_04270 and PS417_25835 in Pseudomonas simiae WCS417

55 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_04270 ribonuclease G 1.0 PS417_25835 hypothetical protein 0.40 20
Pseudomonas fluorescens SBW25 1.00 PFLU_RS04325 ribonuclease G 1.00 PFLU_RS27490 YeaH/YhbH family protein low > 109
Pseudomonas fluorescens SBW25-INTG 1.00 PFLU_RS04325 ribonuclease G 1.00 PFLU_RS27490 YeaH/YhbH family protein low > 109
Pseudomonas fluorescens GW456-L13 0.99 PfGW456L13_5029 Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-) 0.95 PfGW456L13_1195 FIG002076: hypothetical protein low > 87
Pseudomonas fluorescens FW300-N1B4 0.98 Pf1N1B4_1095 Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-) 0.95 Pf1N1B4_2522 FIG002076: hypothetical protein low > 87
Pseudomonas fluorescens FW300-N2E3 0.96 AO353_05230 ribonuclease G 0.94 AO353_07340 yeaH component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) low > 101
Pseudomonas fluorescens FW300-N2C3 0.96 AO356_07110 ribonuclease G 0.96 AO356_14310 yeaH component of nitrogen-related signalling system yeaH (of yeaGH-ycgB) (from data) low > 104
Pseudomonas fluorescens FW300-N2E2 0.95 Pf6N2E2_3283 Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-) 0.95 Pf6N2E2_4800 yeaH component of nitrogen-related signalling system yeaH (of yeaGH-ycgB) (from data) low > 103
Pseudomonas sp. RS175 0.95 PFR28_00158 Ribonuclease G 0.95 PFR28_04069 hypothetical protein 0.28 13
Pseudomonas syringae pv. syringae B728a 0.94 Psyr_4159 RNAse G 0.92 Psyr_4632 Protein of unknown function DUF444 low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.94 Psyr_4159 RNAse G 0.92 Psyr_4632 Protein of unknown function DUF444 low > 86
Pseudomonas putida KT2440 0.92 PP_0937 endoribonuclease G (RNAse G) 0.89 PP_0396 conserved protein of unknown function low > 96
Pseudomonas sp. S08-1 0.91 OH686_08595 Ribonuclease G 0.90 OH686_15015 UPF0229 protein YeaH low > 80
Pseudomonas stutzeri RCH2 0.90 Psest_3323 ribonuclease, Rne/Rng family 0.87 Psest_3673 Uncharacterized conserved protein low > 67
Marinobacter adhaerens HP15 0.69 HP15_2451 ribonuclease, Rne/Rng family 0.64 HP15_2934 protein YeaH low > 73
Alteromonas macleodii MIT1002 0.60 MIT1002_00224 Ribonuclease G 0.60 MIT1002_01232 hypothetical protein low > 70
Paraburkholderia sabiae LMG 24235 0.59 QEN71_RS24430 ribonuclease G 0.53 QEN71_RS07380 YeaH/YhbH family protein low > 153
Paraburkholderia graminis OAS925 0.59 ABIE53_001538 ribonuclease G 0.55 ABIE53_002317 uncharacterized sporulation protein YeaH/YhbH (DUF444 family) low > 113
Burkholderia phytofirmans PsJN 0.59 BPHYT_RS06375 ribonuclease 0.53 BPHYT_RS11185 hypothetical protein low > 109
Paraburkholderia bryophila 376MFSha3.1 0.59 H281DRAFT_04515 RNAse G 0.55 H281DRAFT_05233 hypothetical protein low > 103
Herbaspirillum seropedicae SmR1 0.58 HSERO_RS17790 ribonuclease 0.54 HSERO_RS21695 hypothetical protein — —
Vibrio cholerae E7946 ATCC 55056 0.58 CSW01_02205 ribonuclease E/G 0.56 CSW01_09385 hypothetical protein low > 62
Dickeya dianthicola 67-19 0.57 HGI48_RS01370 ribonuclease G 0.55 HGI48_RS10250 YeaH/YhbH family protein low > 71
Dickeya dadantii 3937 0.57 DDA3937_RS01450 ribonuclease G 0.55 DDA3937_RS10240 YeaH/YhbH family protein low > 74
Dickeya dianthicola ME23 0.57 DZA65_RS01430 ribonuclease G 0.55 DZA65_RS10725 YeaH/YhbH family protein low > 75
Klebsiella michiganensis M5al 0.57 BWI76_RS25480 ribonuclease E/G 0.56 BWI76_RS11480 hypothetical protein low > 92
Shewanella sp. ANA-3 0.57 Shewana3_3644 ribonuclease G (RefSeq) 0.53 Shewana3_1637 hypothetical protein (RefSeq) low > 73
Escherichia coli ECRC101 0.57 MCAODC_08265 rng ribonuclease G 0.56 MCAODC_18705 yeaH UPF0229 protein YeaH — —
Escherichia coli BW25113 0.57 b3247 cafA bundles of cytoplasmic filaments (VIMSS) 0.56 b1784 yeaH yeaH component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.57 OHPLBJKB_00458 Ribonuclease G 0.56 OHPLBJKB_01948 hypothetical protein low > 73
Escherichia coli ECOR27 0.57 NOLOHH_09530 rng ribonuclease G 0.56 NOLOHH_17235 yeaH UPF0229 protein YeaH — —
Escherichia coli ECRC98 0.57 JDDGAC_21370 rng ribonuclease G 0.56 JDDGAC_01280 yeaH UPF0229 protein YeaH — —
Escherichia fergusonii Becca 0.57 EFB2_00584 Ribonuclease G 0.56 EFB2_02210 hypothetical protein low > 86
Escherichia coli ECRC99 0.57 KEDOAH_10405 rng ribonuclease G 0.56 KEDOAH_01405 yeaH UPF0229 protein YeaH — —
Escherichia coli ECRC102 0.57 NIAGMN_15505 rng ribonuclease G 0.56 NIAGMN_01360 yeaH UPF0229 protein YeaH — —
Escherichia coli Nissle 1917 0.57 ECOLIN_RS18605 ribonuclease G 0.56 ECOLIN_RS09945 YeaH/YhbH family protein low > 52
Escherichia coli ECRC101 0.57 OKFHMN_17745 rng ribonuclease G 0.56 OKFHMN_26705 yeaH UPF0229 protein YeaH — —
Escherichia coli ECOR38 0.57 HEPCGN_16610 rng ribonuclease G 0.56 HEPCGN_05095 yeaH UPF0229 protein YeaH low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.57 GFF2138 Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-) 0.56 GFF3472 UPF0229 protein YeaH low > 78
Escherichia coli ECRC62 0.57 BNILDI_01990 rng ribonuclease G 0.56 BNILDI_16020 yeaH UPF0229 protein YeaH — —
Escherichia coli BL21 0.57 ECD_03106 ribonuclease G 0.56 ECD_01753 UPF0229 family protein — —
Rahnella sp. WP5 0.57 EX31_RS12255 ribonuclease G 0.57 EX31_RS06255 YeaH/YhbH family protein low > 89
Enterobacter sp. TBS_079 0.57 MPMX20_04153 Ribonuclease G 0.57 MPMX20_01839 hypothetical protein low > 85
Shewanella oneidensis MR-1 0.57 SO4094 cafA ribonuclease G (NCBI ptt file) 0.56 SO2883 yeaH component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) low > 76
Pectobacterium carotovorum WPP14 0.57 HER17_RS20150 ribonuclease G 0.58 HER17_RS11155 YeaH/YhbH family protein low > 75
Enterobacter asburiae PDN3 0.57 EX28DRAFT_3297 ribonuclease, Rne/Rng family 0.57 EX28DRAFT_1777 Uncharacterized conserved protein low > 76
Serratia liquefaciens MT49 0.57 IAI46_22700 ribonuclease G 0.56 IAI46_14380 YeaH/YhbH family protein low > 86
Shewanella loihica PV-4 0.56 Shew_0407 ribonuclease G (RefSeq) 0.56 Shew_1832 hypothetical protein (RefSeq) low > 60
Erwinia tracheiphila SCR3 0.56 LU632_RS21430 rng ribonuclease G 0.55 LU632_RS13015 YeaH/YhbH family protein low > 74
Shewanella amazonensis SB2B 0.55 Sama_0471 ribonuclease G (RefSeq) 0.54 Sama_1922 yeaH component of nitrogen-related signalling system yeaH (of yeaGH-ycgB) (from data) low > 62
Pantoea sp. MT58 0.55 IAI47_02455 ribonuclease G 0.57 IAI47_08920 YeaH/YhbH family protein low > 76
Ralstonia sp. UNC404CL21Col 0.55 ABZR87_RS15440 ribonuclease G 0.51 ABZR87_RS14215 YeaH/YhbH family protein low > 80
Cupriavidus basilensis FW507-4G11 0.55 RR42_RS04700 ribonuclease G 0.52 RR42_RS36480 hypothetical protein low > 128
Acidovorax sp. GW101-3H11 0.53 Ac3H11_2416 Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-) 0.49 Ac3H11_1146 FIG002076: hypothetical protein low > 79
Variovorax sp. SCN45 0.53 GFF295 Ribonuclease G 0.48 GFF2934 FIG002076: hypothetical protein low > 127
Variovorax sp. OAS795 0.53 ABID97_RS16705 ribonuclease G 0.46 ABID97_RS10265 YeaH/YhbH family protein low > 91

Not shown: 17 genomes with orthologs for PS417_04270 only; 7 genomes with orthologs for PS417_25835 only