| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 1.0 | GFF199 | | Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1) | 1.0 | GFF4908 | | Membrane-associated zinc metalloprotease | 0.60 | 17 |
| Acidovorax sp. GW101-3H11 | 0.71 | Ac3H11_2881 | | Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1) | 0.63 | Ac3H11_425 | | Membrane-associated zinc metalloprotease | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.70 | QEN71_RS25300 | | sugar ABC transporter ATP-binding protein | 0.42 | QEN71_RS06455 | | RIP metalloprotease RseP | low | > 153 |
| Variovorax sp. OAS795 | 0.69 | ABID97_RS00435 | | sugar ABC transporter ATP-binding protein | 0.65 | ABID97_RS17135 | | RIP metalloprotease RseP | low | > 91 |
| Variovorax sp. SCN45 | 0.68 | GFF3690 | | ABC transporter, ATP-binding protein (cluster 2, ribose/xylose/arabinose/galactose) / ABC transporter, ATP-binding protein (cluster 2, ribose/xylose/arabinose/galactose) | 0.66 | GFF386 | | Membrane-associated zinc metalloprotease | 0.40 | 40 |
| Burkholderia phytofirmans PsJN | 0.68 | BPHYT_RS04685 | | ABC transporter ATP-binding protein | 0.41 | BPHYT_RS12105 | | zinc metalloprotease | — | — |
| Paraburkholderia graminis OAS925 | 0.67 | ABIE53_001218 | | ribose transport system ATP-binding protein | 0.40 | ABIE53_002496 | | regulator of sigma E protease | low | > 113 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.65 | H281DRAFT_00104 | | monosaccharide ABC transporter ATP-binding protein, CUT2 family | 0.41 | H281DRAFT_00617 | | site-2 protease. Metallo peptidase. MEROPS family M50B | — | — |
| Ralstonia sp. UNC404CL21Col | 0.41 | ABZR87_RS12025 | | sugar ABC transporter ATP-binding protein | 0.36 | ABZR87_RS11860 | | RIP metalloprotease RseP | low | > 80 |
| Pectobacterium carotovorum WPP14 | 0.39 | HER17_RS21545 | | ribose ABC transporter ATP-binding protein RbsA | 0.31 | HER17_RS16300 | | sigma E protease regulator RseP | low | > 75 |
| Dinoroseobacter shibae DFL-12 | 0.39 | Dshi_2433 | | ABC transporter related (RefSeq) | 0.20 | Dshi_1498 | | putative membrane-associated zinc metalloprotease (RefSeq) | low | > 64 |
| Dickeya dadantii 3937 | 0.39 | DDA3937_RS00035 | | ribose ABC transporter ATP-binding protein RbsA | 0.28 | DDA3937_RS05150 | | sigma E protease regulator RseP | 0.41 | 44 |
| Pantoea sp. MT58 | 0.39 | IAI47_00355 | | ribose ABC transporter ATP-binding protein RbsA | 0.30 | IAI47_15495 | | sigma E protease regulator RseP | — | — |
| Dickeya dianthicola 67-19 | 0.38 | HGI48_RS21330 | | ribose ABC transporter ATP-binding protein RbsA | 0.27 | HGI48_RS05150 | | sigma E protease regulator RseP | low | > 71 |
| Escherichia coli ECOR38 | 0.38 | HEPCGN_13455 | rbsA | ribose ABC transporter ATP-binding protein RbsA | 0.31 | HEPCGN_08130 | rseP | sigma E protease regulator RseP | — | — |
| Escherichia coli ECRC62 | 0.38 | BNILDI_04645 | rbsA | ribose ABC transporter ATP-binding protein RbsA | 0.31 | BNILDI_09150 | rseP | sigma E protease regulator RseP | — | — |
| Escherichia coli BW25113 | 0.38 | b3749 | rbsA | fused D-ribose transporter subunits of ABC superfamily: ATP-binding components (NCBI) | 0.31 | b0176 | yaeL | zinc metallopeptidase (NCBI) | — | — |
| Escherichia coli ECOR27 | 0.38 | NOLOHH_06880 | rbsA | ribose ABC transporter ATP-binding protein RbsA | 0.31 | NOLOHH_02520 | rseP | sigma E protease regulator RseP | — | — |
| Enterobacter asburiae PDN3 | 0.38 | EX28DRAFT_4216 | | ABC-type sugar transport system, ATPase component | 0.30 | EX28DRAFT_3764 | | RIP metalloprotease RseP | — | — |
| Escherichia coli ECRC99 | 0.38 | KEDOAH_15455 | rbsA | Ribose import ATP-binding protein RbsA | 0.31 | KEDOAH_17980 | rseP | sigma E protease regulator RseP | — | — |
| Escherichia coli ECRC98 | 0.38 | JDDGAC_16345 | rbsA | Ribose import ATP-binding protein RbsA | 0.31 | JDDGAC_13770 | rseP | sigma E protease regulator RseP | — | — |
| Escherichia coli ECRC102 | 0.38 | NIAGMN_10555 | rbsA | Ribose import ATP-binding protein RbsA | 0.31 | NIAGMN_08025 | rseP | sigma E protease regulator RseP | — | — |
| Escherichia coli ECRC101 | 0.38 | MCAODC_03220 | rbsA | Ribose import ATP-binding protein RbsA | 0.31 | MCAODC_00690 | rseP | sigma E protease regulator RseP | — | — |
| Enterobacter sp. TBS_079 | 0.38 | MPMX20_00302 | | Ribose import ATP-binding protein RbsA | 0.30 | MPMX20_00860 | | Regulator of sigma-E protease RseP | — | — |
| Escherichia coli BL21 | 0.38 | ECD_03635 | | D-ribose ABC transporter ATPase | 0.31 | ECD_00174 | | inner membrane zinc RIP metalloprotease; RpoE activator, by degrading RseA; cleaved signal peptide endoprotease | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.38 | OHPLBJKB_04304 | | Ribose import ATP-binding protein RbsA | 0.31 | OHPLBJKB_03487 | | Regulator of sigma-E protease RseP | — | — |
| Escherichia coli Nissle 1917 | 0.38 | ECOLIN_RS21555 | | ribose ABC transporter ATP-binding protein RbsA | 0.31 | ECOLIN_RS00960 | | sigma E protease regulator RseP | — | — |
| Escherichia fergusonii Becca | 0.38 | EFB2_04884 | | Ribose import ATP-binding protein RbsA | 0.31 | EFB2_03868 | | Regulator of sigma-E protease RseP | — | — |
| Escherichia coli ECRC101 | 0.38 | OKFHMN_12710 | rbsA | Ribose import ATP-binding protein RbsA | 0.31 | OKFHMN_10175 | rseP | sigma E protease regulator RseP | — | — |
| Serratia liquefaciens MT49 | 0.38 | IAI46_10095 | | sugar ABC transporter ATP-binding protein | 0.31 | IAI46_20225 | | sigma E protease regulator RseP | — | — |
| Herbaspirillum seropedicae SmR1 | 0.38 | HSERO_RS03640 | | D-mannose ABC transporter, ATPase component (from data) | 0.37 | HSERO_RS10910 | | peptidase | low | > 78 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.38 | GFF1708 | | Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1) | 0.30 | GFF46 | | Intramembrane protease RasP/YluC, implicated in cell division based on FtsL cleavage | — | — |
| Dickeya dianthicola ME23 | 0.38 | DZA65_RS22310 | | ribose ABC transporter ATP-binding protein RbsA | 0.27 | DZA65_RS05490 | | sigma E protease regulator RseP | low | > 75 |
| Phaeobacter inhibens DSM 17395 | 0.38 | PGA1_c23060 | | ribose import ATP-binding protein RbsA | 0.19 | PGA1_c14260 | | peptidase M50 | low | > 62 |
| Klebsiella michiganensis M5al | 0.38 | BWI76_RS14860 | | ABC transporter | 0.29 | BWI76_RS05250 | | zinc metallopeptidase RseP | — | — |
| Pseudomonas simiae WCS417 | 0.38 | PS417_13635 | | D-ribose transporter ATP-binding protein | 0.31 | PS417_06245 | | zinc metallopeptidase RseP | low | > 88 |
| Ralstonia solanacearum PSI07 | 0.37 | RPSI07_RS17910 | | sugar ABC transporter ATP-binding protein | 0.36 | RPSI07_RS17065 | | RIP metalloprotease RseP | low | > 81 |
| Ralstonia solanacearum UW163 | 0.37 | UW163_RS12905 | | sugar ABC transporter ATP-binding protein | 0.39 | UW163_RS13740 | | RIP metalloprotease RseP | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.37 | RALBFv3_RS15445 | | sugar ABC transporter ATP-binding protein | 0.39 | RALBFv3_RS00410 | | RIP metalloprotease RseP | low | > 76 |
| Pseudomonas fluorescens SBW25-INTG | 0.37 | PFLU_RS15210 | | sugar ABC transporter ATP-binding protein | 0.31 | PFLU_RS06310 | | sigma E protease regulator RseP | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.37 | PFLU_RS15210 | | sugar ABC transporter ATP-binding protein | 0.31 | PFLU_RS06310 | | sigma E protease regulator RseP | low | > 109 |
| Rahnella sp. WP5 | 0.37 | EX31_RS06175 | | ribose ABC transporter ATP-binding protein RbsA | 0.30 | EX31_RS13000 | | sigma E protease regulator RseP | — | — |
| Dyella japonica UNC79MFTsu3.2 | 0.37 | ABZR86_RS14415 | | D-xylose ABC transporter ATP-binding protein | 0.29 | ABZR86_RS21620 | | RIP metalloprotease RseP | — | — |
| Vibrio cholerae E7946 ATCC 55056 | 0.36 | CSW01_14650 | | ribose import ATP-binding protein RbsA | 0.28 | CSW01_11475 | | zinc metalloprotease | — | — |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.36 | Psyr_3264 | | monosaccharide ABC transporter ATP-binding protein, CUT2 family | 0.30 | Psyr_1350 | | site-2 protease, Metallo peptidase, MEROPS family M50B | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.36 | Psyr_3264 | | monosaccharide ABC transporter ATP-binding protein, CUT2 family | 0.30 | Psyr_1350 | | site-2 protease, Metallo peptidase, MEROPS family M50B | 0.34 | 55 |
| Pseudomonas fluorescens FW300-N2E2 | 0.36 | Pf6N2E2_523 | | Inositol transport system ATP-binding protein | 0.31 | Pf6N2E2_3062 | | Membrane-associated zinc metalloprotease | low | > 103 |
| Pseudomonas fluorescens FW300-N2E3 | 0.36 | AO353_21385 | | m-Inositol ABC transporter, ATPase component (itaA) (from data) | 0.32 | AO353_16495 | | zinc metallopeptidase RseP | low | > 101 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.36 | ABZR88_RS15225 | | sugar ABC transporter ATP-binding protein | 0.15 | ABZR88_RS10585 | | RIP metalloprotease RseP | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.36 | AO356_23205 | | D-ribose transporter ATP-binding protein | 0.31 | AO356_06005 | | zinc metallopeptidase RseP | low | > 104 |
| Pseudomonas fluorescens FW300-N1B4 | 0.36 | Pf1N1B4_4286 | | Inositol transport system ATP-binding protein | 0.31 | Pf1N1B4_3091 | | Membrane-associated zinc metalloprotease | low | > 87 |
| Cupriavidus basilensis FW507-4G11 | 0.36 | RR42_RS03360 | | fructose ABC transporter, ATPase component (FrcA) (from data) | 0.34 | RR42_RS11840 | | zinc metalloprotease | low | > 128 |
| Ralstonia solanacearum GMI1000 | 0.35 | RS_RS05030 | | sugar ABC transporter ATP-binding protein | 0.36 | RS_RS07080 | | RIP metalloprotease RseP | low | > 80 |
| Pseudomonas sp. RS175 | 0.35 | PFR28_02416 | | Galactose/methyl galactoside import ATP-binding protein MglA | 0.32 | PFR28_00403 | | Regulator of sigma-E protease RseP | low | > 88 |
| Pseudomonas putida KT2440 | 0.34 | PP_2759 | | ribose ABC transporter - ATP-binding subunit | 0.31 | PP_1598 | | regulatory intramembrane protein RIP zinc protease | low | > 96 |
| Pseudomonas fluorescens GW456-L13 | 0.33 | PfGW456L13_2121 | | L-arabinose transport ATP-binding protein AraG (TC 3.A.1.2.2) | 0.31 | PfGW456L13_4701 | | Membrane-associated zinc metalloprotease | low | > 87 |
| Erwinia tracheiphila SCR3 | 0.33 | LU632_RS08525 | mglA | galactose/methyl galactoside ABC transporter ATP-binding protein MglA | 0.31 | LU632_RS19930 | rseP | sigma E protease regulator RseP | low | > 74 |
| Echinicola vietnamensis KMM 6221, DSM 17526 | 0.33 | Echvi_1282 | | ABC-type sugar transport system, ATPase component | 0.17 | Echvi_4671 | | RIP metalloprotease RseP | — | — |
| Shewanella sp. ANA-3 | 0.30 | Shewana3_2074 | | L-arabinose ABC transporter, ATPase component AraV (from data) | 0.31 | Shewana3_2808 | | peptidase RseP (RefSeq) | — | — |
Not shown: 11 genomes with orthologs for GFF199 only; 24 genomes with orthologs for GFF4908 only