Conservation of cofitness between GFF4099 and GFF4888 in Hydrogenophaga sp. GW460-11-11-14-LB1

53 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Hydrogenophaga sp. GW460-11-11-14-LB1 1.0 GFF4099 Fumarate hydratase class I, aerobic (EC 4.2.1.2) 1.0 GFF4888 Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4) 0.63 14
Acidovorax sp. GW101-3H11 0.92 Ac3H11_941 Fumarate hydratase class I, aerobic (EC 4.2.1.2) 0.86 Ac3H11_4091 Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4)
Variovorax sp. OAS795 0.91 ABID97_RS17550 fumarate hydratase 0.76 ABID97_RS14115 dihydrolipoyl dehydrogenase low > 91
Variovorax sp. SCN45 0.91 GFF483 Fumarate hydratase class I, aerobic (EC 4.2.1.2) 0.74 GFF970 Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4) low > 127
Herbaspirillum seropedicae SmR1 0.82 HSERO_RS07760 fumarate hydratase 0.67 HSERO_RS07315 dihydrolipoamide dehydrogenase
Cupriavidus basilensis FW507-4G11 0.78 RR42_RS13905 fumarate hydratase 0.64 RR42_RS07380 dihydrolipoamide dehydrogenase low > 128
Ralstonia solanacearum PSI07 0.78 RPSI07_RS14865 fumarate hydratase 0.63 RPSI07_RS15830 dihydrolipoyl dehydrogenase
Paraburkholderia bryophila 376MFSha3.1 0.77 H281DRAFT_04956 fumarase, class I, homodimeric 0.64 H281DRAFT_00468 dihydrolipoamide dehydrogenase
Burkholderia phytofirmans PsJN 0.77 BPHYT_RS06985 fumarate hydratase 0.63 BPHYT_RS12830 dihydrolipoamide dehydrogenase 0.56 102
Paraburkholderia graminis OAS925 0.77 ABIE53_001662 fumarate hydratase class I 0.65 ABIE53_002791 dihydrolipoamide dehydrogenase low > 113
Ralstonia sp. UNC404CL21Col 0.77 ABZR87_RS14375 fumarate hydratase 0.66 ABZR87_RS13455 dihydrolipoyl dehydrogenase
Ralstonia solanacearum GMI1000 0.77 RS_RS09830 fumarate hydratase 0.64 RS_RS08070 dihydrolipoyl dehydrogenase
Ralstonia solanacearum IBSBF1503 0.76 RALBFv3_RS02460 fumarate hydratase 0.64 RALBFv3_RS01655 dihydrolipoyl dehydrogenase
Ralstonia solanacearum UW163 0.76 UW163_RS11265 fumarate hydratase 0.64 UW163_RS14965 dihydrolipoyl dehydrogenase
Paraburkholderia sabiae LMG 24235 0.76 QEN71_RS23780 fumarate hydratase 0.64 QEN71_RS05735 dihydrolipoyl dehydrogenase low > 153
Dyella japonica UNC79MFTsu3.2 0.75 ABZR86_RS19555 fumarate hydratase 0.55 ABZR86_RS12280 dihydrolipoyl dehydrogenase low > 74
Rhodanobacter denitrificans MT42 0.73 LRK55_RS12360 fumarate hydratase 0.54 LRK55_RS11025 dihydrolipoyl dehydrogenase low > 63
Lysobacter sp. OAE881 0.73 ABIE51_RS12620 fumarate hydratase 0.53 ABIE51_RS18420 dihydrolipoyl dehydrogenase
Rhodanobacter sp. FW510-T8 0.73 OKGIIK_02115 ttdA fumarate hydratase 0.56 OKGIIK_12590 lpdA dihydrolipoyl dehydrogenase low > 52
Castellaniella sp019104865 MT123 0.73 ABCV34_RS09450 fumarate hydratase 0.66 ABCV34_RS04150 dihydrolipoyl dehydrogenase
Dechlorosoma suillum PS 0.72 Dsui_2001 hydro-lyase, Fe-S type, tartrate/fumarate subfamily,hydro-lyase family enzyme, Fe-S type, tartrate/fumarate subfamily 0.60 Dsui_1576 dihydrolipoamide dehydrogenase
Shewanella loihica PV-4 0.67 Shew_1904 tartrate/fumarate subfamily Fe-S type hydro-lyase alpha subunit (RefSeq) 0.45 Shew_3429 dihydrolipoamide dehydrogenase (RefSeq)
Kangiella aquimarina DSM 16071 0.67 B158DRAFT_1342 fumarase, class I, homodimeric (EC 4.2.1.2) 0.48 B158DRAFT_2146 dihydrolipoamide dehydrogenase
Shewanella amazonensis SB2B 0.66 Sama_1688 fumarate hydratase, class I, anaerobic, putative (RefSeq) 0.46 Sama_0377 dihydrolipoamide dehydrogenase (RefSeq)
Shewanella oneidensis MR-1 0.66 SO2222 fumarate hydratase, class I, anaerobic, putative (NCBI ptt file) 0.46 SO0426 lpdA pyruvate dehydrogenase complex, E3 component, lipoamide dehydrogenase (NCBI ptt file)
Alteromonas macleodii MIT1002 0.65 MIT1002_02009 Fumarate hydratase class I, anaerobic 0.46 MIT1002_03001 Dihydrolipoyl dehydrogenase
Shewanella sp. ANA-3 0.65 Shewana3_2302 fumarase (RefSeq) 0.46 Shewana3_0428 dihydrolipoamide dehydrogenase (RefSeq)
Vibrio cholerae E7946 ATCC 55056 0.64 CSW01_06585 fumarate hydratase 0.45 CSW01_12210 dihydrolipoyl dehydrogenase
Dinoroseobacter shibae DFL-12 0.55 Dshi_1426 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit (RefSeq) 0.51 Dshi_1966 dihydrolipoamide dehydrogenase (RefSeq) low > 64
Enterobacter asburiae PDN3 0.20 EX28DRAFT_1609 hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region/hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region 0.46 EX28DRAFT_3712 dihydrolipoamide dehydrogenase
Escherichia fergusonii Becca 0.20 EFB2_02380 Fumarate hydratase class I, aerobic 0.46 EFB2_03929 Dihydrolipoyl dehydrogenase
Escherichia coli ECOR38 0.20 HEPCGN_06020 fumB class I fumarate hydratase 0.46 HEPCGN_08470 lpdA dihydrolipoyl dehydrogenase
Escherichia coli ECOR27 0.20 NOLOHH_18150 fumB class I fumarate hydratase 0.46 NOLOHH_02835 lpdA dihydrolipoyl dehydrogenase
Escherichia coli BL21 0.20 ECD_01581 fumarate hydratase (fumarase A), aerobic Class I 0.46 ECD_00115 dihydrolipoyl dehydrogenase; E3 component of pyruvate and 2-oxoglutarate dehydrogenases complexes; glycine cleavage system L protein; dihydrolipoamide dehydrogenase
Escherichia coli ECRC102 0.20 NIAGMN_10370 fumB class I fumarate hydratase 0.46 NIAGMN_08340 lpdA dihydrolipoyl dehydrogenase
Enterobacter sp. TBS_079 0.20 MPMX20_02021 Fumarate hydratase class I, aerobic 0.46 MPMX20_00809 Dihydrolipoyl dehydrogenase
Escherichia coli ECRC101 0.20 OKFHMN_12525 fumB class I fumarate hydratase 0.46 OKFHMN_10490 lpdA dihydrolipoyl dehydrogenase
Escherichia coli Nissle 1917 0.20 ECOLIN_RS09000 class I fumarate hydratase 0.46 ECOLIN_RS00650 dihydrolipoyl dehydrogenase
Escherichia coli ECRC62 0.20 BNILDI_16940 fumB class I fumarate hydratase 0.46 BNILDI_08775 lpdA dihydrolipoyl dehydrogenase
Escherichia coli BW25113 0.20 b1612 fumA fumarate hydratase (fumarase A), aerobic Class I (NCBI) 0.46 b0116 lpd dihydrolipoamide dehydrogenase (NCBI)
Escherichia coli HS(pFamp)R (ATCC 700891) 0.20 OHPLBJKB_03922 Fumarate hydratase class I, anaerobic 0.46 OHPLBJKB_03545 Dihydrolipoyl dehydrogenase
Escherichia coli ECRC101 0.20 MCAODC_03035 fumB class I fumarate hydratase 0.46 MCAODC_01005 lpdA dihydrolipoyl dehydrogenase
Escherichia coli ECRC99 0.20 KEDOAH_15640 fumB class I fumarate hydratase 0.46 KEDOAH_17665 lpdA dihydrolipoyl dehydrogenase
Escherichia coli ECRC98 0.20 JDDGAC_16160 fumB class I fumarate hydratase 0.46 JDDGAC_14085 lpdA dihydrolipoyl dehydrogenase
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.19 GFF1477 Fumarate hydratase class I, anaerobic (EC 4.2.1.2) 0.46 GFF120 Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4) @ Dihydrolipoamide dehydrogenase (EC 1.8.1.4)
Klebsiella michiganensis M5al 0.19 BWI76_RS08450 fumarate hydratase 0.46 BWI76_RS04890 dihydrolipoyl dehydrogenase
Serratia liquefaciens MT49 0.19 IAI46_21370 fumarate hydratase 0.46 IAI46_21315 dihydrolipoyl dehydrogenase
Rahnella sp. WP5 0.19 EX31_RS01160 fumarate hydratase 0.45 EX31_RS03465 dihydrolipoyl dehydrogenase
Erwinia tracheiphila SCR3 0.19 LU632_RS01205 class I fumarate hydratase FumA 0.46 LU632_RS03090 lpdA dihydrolipoyl dehydrogenase
Dickeya dadantii 3937 0.19 DDA3937_RS04540 fumarate hydratase 0.45 DDA3937_RS17915 dihydrolipoyl dehydrogenase
Dickeya dianthicola ME23 0.19 DZA65_RS04420 fumarate hydratase 0.45 DZA65_RS18990 dihydrolipoyl dehydrogenase
Pectobacterium carotovorum WPP14 0.18 HER17_RS17120 fumarate hydratase 0.46 HER17_RS03300 dihydrolipoyl dehydrogenase
Dickeya dianthicola 67-19 0.18 HGI48_RS04500 fumarate hydratase 0.45 HGI48_RS17840 dihydrolipoyl dehydrogenase
Pantoea sp. MT58 0.18 IAI47_20435 fumarate hydratase 0.45 IAI47_15800 dihydrolipoyl dehydrogenase

Not shown: 31 genomes with orthologs for GFF4099 only; 1 genomes with orthologs for GFF4888 only