Conservation of cofitness between PS417_23385 and PS417_23910 in Pseudomonas simiae WCS417

57 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_23385 cytochrome o ubiquinol oxidase subunit I 1.0 PS417_23910 3-methyl-2-oxobutanoate hydroxymethyltransferase 0.45 8
Pseudomonas fluorescens SBW25-INTG 0.99 PFLU_RS25215 cytochrome o ubiquinol oxidase subunit I 0.98 PFLU_RS25750 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 109
Pseudomonas fluorescens SBW25 0.99 PFLU_RS25215 cytochrome o ubiquinol oxidase subunit I 0.98 PFLU_RS25750 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 109
Pseudomonas fluorescens FW300-N1B4 0.93 Pf1N1B4_972 Cytochrome O ubiquinol oxidase subunit I (EC 1.10.3.-) 0.87 Pf1N1B4_2854 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC 2.1.2.11) low > 87
Pseudomonas fluorescens FW300-N2C3 0.92 AO356_16965 cytochrome o ubiquinol oxidase subunit I 0.87 AO356_16060 3-methyl-2-oxobutanoate hydroxymethyltransferase 0.32 33
Pseudomonas sp. RS175 0.92 PFR28_00243 Cytochrome bo(3) ubiquinol oxidase subunit 1 0.85 PFR28_03721 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 88
Pseudomonas fluorescens FW300-N2E2 0.92 Pf6N2E2_5318 Cytochrome O ubiquinol oxidase subunit I (EC 1.10.3.-) 0.86 Pf6N2E2_5153 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC 2.1.2.11) low > 103
Pseudomonas fluorescens FW300-N2E3 0.91 AO353_15455 cytochrome o ubiquinol oxidase subunit I 0.89 AO353_14385 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 101
Pseudomonas fluorescens GW456-L13 0.90 PfGW456L13_4935 Cytochrome O ubiquinol oxidase subunit I (EC 1.10.3.-) 0.86 PfGW456L13_1521 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC 2.1.2.11) low > 87
Pseudomonas syringae pv. syringae B728a 0.83 Psyr_1142 cytochrome bo3 quinol oxidase subunit 1 apoprotein 0.83 Psyr_0828 ketopantoate hydroxymethyltransferase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.83 Psyr_1142 cytochrome bo3 quinol oxidase subunit 1 apoprotein 0.83 Psyr_0828 ketopantoate hydroxymethyltransferase — —
Pseudomonas putida KT2440 0.82 PP_0813 cytochrome bo terminal oxidase subunit I 0.85 PP_4699 3-methyl-2-oxobutanoate hydroxymethyltransferase — —
Shewanella loihica PV-4 0.72 Shew_0367 cytochrome-c oxidase (RefSeq) 0.57 Shew_3133 3-methyl-2-oxobutanoate hydroxymethyltransferase (RefSeq) — —
Shewanella sp. ANA-3 0.72 Shewana3_4032 cytochrome c oxidase, subunit I (RefSeq) 0.57 Shewana3_3408 panB 3-methyl-2-oxobutanoate hydroxymethyltransferase (RefSeq) low > 73
Alteromonas macleodii MIT1002 0.71 MIT1002_03928 Ubiquinol oxidase subunit 1 0.57 MIT1002_03694 3-methyl-2-oxobutanoate hydroxymethyltransferase — —
Pectobacterium carotovorum WPP14 0.70 HER17_RS15880 cytochrome o ubiquinol oxidase subunit I 0.55 HER17_RS05560 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 75
Dickeya dianthicola ME23 0.70 DZA65_RS05980 cytochrome o ubiquinol oxidase subunit I 0.56 DZA65_RS17155 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 75
Dickeya dadantii 3937 0.70 DDA3937_RS05610 cytochrome o ubiquinol oxidase subunit I 0.56 DDA3937_RS15955 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 74
Serratia liquefaciens MT49 0.70 IAI46_04980 cytochrome o ubiquinol oxidase subunit I 0.55 IAI46_21240 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 86
Klebsiella michiganensis M5al 0.70 BWI76_RS06490 cytochrome ubiquinol oxidase subunit I 0.56 BWI76_RS04995 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 92
Escherichia coli BW25113 0.70 b0431 cyoB cytochrome o ubiquinol oxidase subunit I (NCBI) 0.57 b0134 panB 3-methyl-2-oxobutanoate hydroxymethyltransferase (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.70 OHPLBJKB_03242 Cytochrome bo(3) ubiquinol oxidase subunit 1 0.58 OHPLBJKB_03527 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 73
Escherichia coli ECOR38 0.70 HEPCGN_06980 cyoB cytochrome o ubiquinol oxidase subunit I 0.57 HEPCGN_08375 panB 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 85
Dickeya dianthicola 67-19 0.70 HGI48_RS05655 cytochrome o ubiquinol oxidase subunit I 0.56 HGI48_RS16070 3-methyl-2-oxobutanoate hydroxymethyltransferase 0.61 43
Escherichia coli ECRC101 0.70 OKFHMN_08365 cyoB cytochrome o ubiquinol oxidase subunit I 0.57 OKFHMN_10400 panB 3-methyl-2-oxobutanoate hydroxymethyltransferase — —
Escherichia coli ECOR27 0.70 NOLOHH_01300 cyoB cytochrome o ubiquinol oxidase subunit I 0.58 NOLOHH_02745 panB 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 57
Escherichia coli ECRC102 0.70 NIAGMN_06420 cyoB cytochrome o ubiquinol oxidase subunit I 0.57 NIAGMN_08250 panB 3-methyl-2-oxobutanoate hydroxymethyltransferase — —
Escherichia coli ECRC62 0.70 BNILDI_22715 cyoB cytochrome o ubiquinol oxidase subunit I 0.58 BNILDI_08925 panB 3-methyl-2-oxobutanoate hydroxymethyltransferase — —
Escherichia fergusonii Becca 0.70 EFB2_03626 Cytochrome bo(3) ubiquinol oxidase subunit 1 0.57 EFB2_03910 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 86
Escherichia coli ECRC98 0.70 JDDGAC_12020 cyoB cytochrome o ubiquinol oxidase subunit I 0.57 JDDGAC_13995 panB 3-methyl-2-oxobutanoate hydroxymethyltransferase — —
Escherichia coli BL21 0.70 ECD_00382 cytochrome o ubiquinol oxidase subunit I 0.57 ECD_00133 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 60
Escherichia coli ECRC101 0.70 MCAODC_27590 cyoB cytochrome o ubiquinol oxidase subunit I 0.57 MCAODC_00915 panB 3-methyl-2-oxobutanoate hydroxymethyltransferase — —
Escherichia coli ECRC99 0.70 KEDOAH_19600 cyoB cytochrome o ubiquinol oxidase subunit I 0.57 KEDOAH_17755 panB 3-methyl-2-oxobutanoate hydroxymethyltransferase — —
Escherichia coli Nissle 1917 0.70 ECOLIN_RS02590 cytochrome o ubiquinol oxidase subunit I 0.57 ECOLIN_RS00745 3-methyl-2-oxobutanoate hydroxymethyltransferase — —
Ralstonia solanacearum PSI07 0.69 RPSI07_RS10570 cytochrome o ubiquinol oxidase subunit I 0.57 RPSI07_RS11985 3-methyl-2-oxobutanoate hydroxymethyltransferase — —
Enterobacter asburiae PDN3 0.69 EX28DRAFT_2540 cytochrome o ubiquinol oxidase, subunit I 0.56 EX28DRAFT_3730 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 76
Enterobacter sp. TBS_079 0.69 MPMX20_01022 Cytochrome bo(3) ubiquinol oxidase subunit 1 0.57 MPMX20_00827 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 85
Rahnella sp. WP5 0.69 EX31_RS22215 cytochrome o ubiquinol oxidase subunit I 0.56 EX31_RS03280 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 89
Cupriavidus basilensis FW507-4G11 0.69 RR42_RS32595 cytochrome o ubiquinol oxidase subunit I 0.46 RR42_RS17250 3-methyl-2-oxobutanoate hydroxymethyltransferase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.69 GFF4345 Cytochrome O ubiquinol oxidase subunit I (EC 1.10.3.-) 0.55 GFF91 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC 2.1.2.11) low > 78
Ralstonia sp. UNC404CL21Col 0.68 ABZR87_RS02330 cytochrome o ubiquinol oxidase subunit I 0.53 ABZR87_RS00950 3-methyl-2-oxobutanoate hydroxymethyltransferase — —
Ralstonia solanacearum GMI1000 0.68 RS_RS14605 cytochrome o ubiquinol oxidase subunit I 0.56 RS_RS13180 3-methyl-2-oxobutanoate hydroxymethyltransferase — —
Pantoea sp. MT58 0.68 IAI47_14685 cytochrome o ubiquinol oxidase subunit I 0.55 IAI47_15655 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 76
Ralstonia solanacearum UW163 0.68 UW163_RS06970 cytochrome o ubiquinol oxidase subunit I 0.58 UW163_RS08310 3-methyl-2-oxobutanoate hydroxymethyltransferase — —
Ralstonia solanacearum IBSBF1503 0.68 RALBFv3_RS06655 cytochrome o ubiquinol oxidase subunit I 0.58 RALBFv3_RS05315 3-methyl-2-oxobutanoate hydroxymethyltransferase — —
Erwinia tracheiphila SCR3 0.67 LU632_RS18380 cyoB cytochrome o ubiquinol oxidase subunit I 0.56 LU632_RS20100 panB 3-methyl-2-oxobutanoate hydroxymethyltransferase — —
Paraburkholderia sabiae LMG 24235 0.67 QEN71_RS15345 cytochrome o ubiquinol oxidase subunit I 0.56 QEN71_RS26480 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 153
Burkholderia phytofirmans PsJN 0.66 BPHYT_RS24920 cytochrome O ubiquinol oxidase 0.54 BPHYT_RS03605 3-methyl-2-oxobutanoate hydroxymethyltransferase — —
Xanthomonas campestris pv. campestris strain 8004 0.66 Xcc-8004.3816.1 Cytochrome O ubiquinol oxidase subunit I (EC 1.10.3.-) 0.50 Xcc-8004.3052.1 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC 2.1.2.11) — —
Acinetobacter radioresistens SK82 0.65 MPMX26_01161 Cytochrome bo(3) ubiquinol oxidase subunit 1 0.54 MPMX26_00545 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 36
Variovorax sp. OAS795 0.62 ABID97_RS07635 cytochrome o ubiquinol oxidase subunit I 0.45 ABID97_RS07435 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 91
Paraburkholderia graminis OAS925 0.62 ABIE53_005341 cytochrome o ubiquinol oxidase subunit 1 0.56 ABIE53_000867 3-methyl-2-oxobutanoate hydroxymethyltransferase — —
Herbaspirillum seropedicae SmR1 0.62 HSERO_RS12315 cytochrome O ubiquinol oxidase 0.57 HSERO_RS03085 3-methyl-2-oxobutanoate hydroxymethyltransferase — —
Variovorax sp. SCN45 0.62 GFF5677 Cytochrome O ubiquinol oxidase subunit I (EC 1.10.3.-) 0.45 GFF2579 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC 2.1.2.11) low > 127
Paraburkholderia bryophila 376MFSha3.1 0.61 H281DRAFT_03427 cytochrome bo3 quinol oxidase subunit 1 apoprotein 0.56 H281DRAFT_04703 ketopantoate hydroxymethyltransferase — —
Lysobacter sp. OAE881 0.61 ABIE51_RS09770 cytochrome o ubiquinol oxidase subunit I 0.52 ABIE51_RS08025 3-methyl-2-oxobutanoate hydroxymethyltransferase — —
Dyella japonica UNC79MFTsu3.2 0.60 ABZR86_RS07620 cytochrome o ubiquinol oxidase subunit I 0.46 ABZR86_RS00815 3-methyl-2-oxobutanoate hydroxymethyltransferase — —
Acidovorax sp. GW101-3H11 0.56 Ac3H11_3142 Cytochrome O ubiquinol oxidase subunit I (EC 1.10.3.-) 0.48 Ac3H11_3839 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC 2.1.2.11) — —

Not shown: 10 genomes with orthologs for PS417_23385 only; 24 genomes with orthologs for PS417_23910 only