Conservation of cofitness between Psest_0718 and Psest_3988 in Pseudomonas stutzeri RCH2

61 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_0718 nicotinate-nucleotide pyrophosphorylase 1.0 Psest_3988 phosphoenolpyruvate carboxykinase (ATP) 0.55 2
Pseudomonas syringae pv. syringae B728a 0.86 Psyr_0815 nicotinate-nucleotide pyrophosphorylase (carboxylating) 0.81 Psyr_0168 Phosphoenolpyruvate carboxykinase (ATP) 0.54 53
Pseudomonas syringae pv. syringae B728a ΔmexB 0.86 Psyr_0815 nicotinate-nucleotide pyrophosphorylase (carboxylating) 0.81 Psyr_0168 Phosphoenolpyruvate carboxykinase (ATP) low > 86
Pseudomonas sp. RS175 0.84 PFR28_00098 Nicotinate-nucleotide pyrophosphorylase [carboxylating] 0.81 PFR28_04874 Phosphoenolpyruvate carboxykinase (ATP) 0.40 45
Pseudomonas fluorescens FW300-N2E3 0.84 AO353_05520 nicotinate-nucleotide pyrophosphorylase 0.80 AO353_11775 phosphoenolpyruvate carboxykinase [ATP] low > 101
Pseudomonas fluorescens FW300-N1B4 0.83 Pf1N1B4_1153 Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19) 0.81 Pf1N1B4_1779 Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) — —
Pseudomonas simiae WCS417 0.83 PS417_03925 nicotinate-nucleotide pyrophosphorylase 0.79 PS417_01210 hypothetical protein 0.45 30
Pseudomonas fluorescens SBW25-INTG 0.83 PFLU_RS03970 carboxylating nicotinate-nucleotide diphosphorylase 0.79 PFLU_RS01320 phosphoenolpyruvate carboxykinase low > 109
Pseudomonas fluorescens SBW25 0.83 PFLU_RS03970 carboxylating nicotinate-nucleotide diphosphorylase 0.79 PFLU_RS01320 phosphoenolpyruvate carboxykinase low > 109
Pseudomonas fluorescens FW300-N2E2 0.81 Pf6N2E2_3346 Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19) 0.82 Pf6N2E2_3899 Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) 0.47 18
Pseudomonas fluorescens FW300-N2C3 0.80 AO356_07370 nicotinate-nucleotide pyrophosphorylase 0.82 AO356_10140 phosphoenolpyruvate carboxykinase [ATP] low > 104
Pseudomonas sp. S08-1 0.80 OH686_16520 nicotinate-nucleotide diphosphorylase (carboxylating) 0.83 OH686_11060 phosphoenolpyruvate carboxykinase (ATP) 0.67 31
Pseudomonas fluorescens GW456-L13 0.80 PfGW456L13_5082 Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19) 0.81 PfGW456L13_420 Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) low > 87
Marinobacter adhaerens HP15 0.70 HP15_1305 nicotinate-nucleotide pyrophosphorylase 0.74 HP15_3498 phosphoenolpyruvate carboxykinase (ATP) — —
Shewanella amazonensis SB2B 0.57 Sama_0371 nicotinate-nucleotide diphosphorylase (carboxylating) (RefSeq) 0.71 Sama_0165 Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) (from data) — —
Rahnella sp. WP5 0.56 EX31_RS03515 carboxylating nicotinate-nucleotide diphosphorylase 0.35 EX31_RS04780 phosphoenolpyruvate carboxykinase (ATP) low > 89
Alteromonas macleodii MIT1002 0.55 MIT1002_03008 Nicotinate-nucleotide pyrophosphorylase [carboxylating] 0.70 MIT1002_03972 Phosphoenolpyruvate carboxykinase [ATP] — —
Pectobacterium carotovorum WPP14 0.55 HER17_RS03250 carboxylating nicotinate-nucleotide diphosphorylase 0.35 HER17_RS01710 phosphoenolpyruvate carboxykinase (ATP) low > 75
Shewanella loihica PV-4 0.55 Shew_3435 nicotinate-nucleotide pyrophosphorylase (RefSeq) 0.71 Shew_3623 phosphoenolpyruvate carboxykinase (RefSeq) — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.55 GFF130 Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19) 0.36 GFF615 Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) low > 78
Dickeya dadantii 3937 0.54 DDA3937_RS17955 carboxylating nicotinate-nucleotide diphosphorylase 0.35 DDA3937_RS19610 phosphoenolpyruvate carboxykinase (ATP) low > 74
Vibrio cholerae E7946 ATCC 55056 0.54 CSW01_12265 carboxylating nicotinate-nucleotide diphosphorylase 0.36 CSW01_13810 phosphoenolpyruvate carboxykinase (ATP) 0.90 6
Dickeya dianthicola 67-19 0.54 HGI48_RS17890 carboxylating nicotinate-nucleotide diphosphorylase 0.36 HGI48_RS19740 phosphoenolpyruvate carboxykinase (ATP) low > 71
Dickeya dianthicola ME23 0.54 DZA65_RS19035 carboxylating nicotinate-nucleotide diphosphorylase 0.36 DZA65_RS20830 phosphoenolpyruvate carboxykinase (ATP) low > 75
Shewanella sp. ANA-3 0.54 Shewana3_0422 nicotinate-nucleotide pyrophosphorylase [carboxylating] (RefSeq) 0.71 Shewana3_0147 phosphoenolpyruvate carboxykinase (RefSeq) — —
Serratia liquefaciens MT49 0.53 IAI46_03530 carboxylating nicotinate-nucleotide diphosphorylase 0.36 IAI46_10700 phosphoenolpyruvate carboxykinase (ATP) low > 86
Escherichia fergusonii Becca 0.52 EFB2_03940 Nicotinate-nucleotide pyrophosphorylase [carboxylating] 0.36 EFB2_00425 Phosphoenolpyruvate carboxykinase (ATP) low > 86
Escherichia coli ECRC98 0.52 JDDGAC_14125 nadC carboxylating nicotinate-nucleotide diphosphorylase 0.36 JDDGAC_20675 pckA phosphoenolpyruvate carboxykinase (ATP) — —
Escherichia coli BL21 0.52 ECD_00108 quinolinate phosphoribosyltransferase 0.36 ECD_03255 phosphoenolpyruvate carboxykinase [ATP] low > 60
Escherichia coli ECRC99 0.52 KEDOAH_17625 nadC carboxylating nicotinate-nucleotide diphosphorylase 0.36 KEDOAH_11095 pckA phosphoenolpyruvate carboxykinase (ATP) — —
Escherichia coli ECOR27 0.52 NOLOHH_02875 nadC carboxylating nicotinate-nucleotide diphosphorylase 0.36 NOLOHH_08835 pckA phosphoenolpyruvate carboxykinase (ATP) low > 57
Escherichia coli ECRC101 0.52 OKFHMN_10530 nadC carboxylating nicotinate-nucleotide diphosphorylase 0.36 OKFHMN_17045 pckA phosphoenolpyruvate carboxykinase (ATP) — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.52 OHPLBJKB_03552 Nicotinate-nucleotide pyrophosphorylase [carboxylating] 0.36 OHPLBJKB_00300 Phosphoenolpyruvate carboxykinase (ATP) low > 73
Escherichia coli ECRC102 0.52 NIAGMN_08380 nadC carboxylating nicotinate-nucleotide diphosphorylase 0.36 NIAGMN_14815 pckA phosphoenolpyruvate carboxykinase (ATP) — —
Escherichia coli BW25113 0.52 b0109 nadC nicotinate-nucleotide pyrophosphorylase (NCBI) 0.36 b3403 pck phosphoenolpyruvate carboxykinase (NCBI) low > 76
Escherichia coli ECRC101 0.52 MCAODC_01045 nadC carboxylating nicotinate-nucleotide diphosphorylase 0.36 MCAODC_07575 pckA phosphoenolpyruvate carboxykinase (ATP) — —
Escherichia coli ECRC62 0.52 BNILDI_08735 nadC carboxylating nicotinate-nucleotide diphosphorylase 0.36 BNILDI_02685 pckA phosphoenolpyruvate carboxykinase (ATP) — —
Escherichia coli Nissle 1917 0.52 ECOLIN_RS00585 carboxylating nicotinate-nucleotide diphosphorylase 0.36 ECOLIN_RS19435 phosphoenolpyruvate carboxykinase (ATP) low > 52
Pantoea sp. MT58 0.52 IAI47_15845 carboxylating nicotinate-nucleotide diphosphorylase 0.37 IAI47_01830 phosphoenolpyruvate carboxykinase (ATP) low > 76
Escherichia coli ECOR38 0.52 HEPCGN_08510 nadC carboxylating nicotinate-nucleotide diphosphorylase 0.36 HEPCGN_15865 pckA phosphoenolpyruvate carboxykinase (ATP) low > 85
Kangiella aquimarina DSM 16071 0.51 B158DRAFT_2135 nicotinate-nucleotide pyrophosphorylase [carboxylating] (EC 2.4.2.19) 0.36 B158DRAFT_2395 phosphoenolpyruvate carboxykinase (ATP) — —
Enterobacter sp. TBS_079 0.51 MPMX20_00800 Nicotinate-nucleotide pyrophosphorylase [carboxylating] 0.36 MPMX20_04290 Phosphoenolpyruvate carboxykinase (ATP) low > 85
Enterobacter asburiae PDN3 0.51 EX28DRAFT_3702 nicotinate-nucleotide pyrophosphorylase [carboxylating] (EC 2.4.2.19) 0.36 EX28DRAFT_4140 phosphoenolpyruvate carboxykinase (ATP) low > 76
Klebsiella michiganensis M5al 0.51 BWI76_RS04845 nicotinate-nucleotide pyrophosphorylase 0.35 BWI76_RS26155 phosphoenolpyruvate carboxykinase (ATP) low > 92
Erwinia tracheiphila SCR3 0.50 LU632_RS03040 nadC carboxylating nicotinate-nucleotide diphosphorylase 0.36 LU632_RS22930 pckA phosphoenolpyruvate carboxykinase (ATP) low > 74
Bosea sp. OAE506 0.44 ABIE41_RS02500 carboxylating nicotinate-nucleotide diphosphorylase 0.41 ABIE41_RS02665 phosphoenolpyruvate carboxykinase low > 77
Rhodopseudomonas palustris CGA009 0.39 TX73_005415 carboxylating nicotinate-nucleotide diphosphorylase 0.43 TX73_001865 phosphoenolpyruvate carboxykinase — —
Parabacteroides merdae CL09T00C40 0.39 HMPREF1078_RS16725 carboxylating nicotinate-nucleotide diphosphorylase 0.33 HMPREF1078_RS07235 phosphoenolpyruvate carboxykinase (ATP) — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.39 CA264_16940 nicotinate-nucleotide diphosphorylase (carboxylating) 0.44 CA264_05270 phosphoenolpyruvate carboxykinase (ATP) — —
Echinicola vietnamensis KMM 6221, DSM 17526 0.38 Echvi_1158 nicotinate-nucleotide pyrophosphorylase 0.44 Echvi_2957 phosphoenolpyruvate carboxykinase (ATP) — —
Phocaeicola dorei CL03T12C01 0.37 ABI39_RS11900 carboxylating nicotinate-nucleotide diphosphorylase 0.34 ABI39_RS06685 phosphoenolpyruvate carboxykinase (ATP) — —
Bacteroides ovatus ATCC 8483 0.37 BACOVA_04303 nicotinate-nucleotide diphosphorylase (carboxylating) 0.32 BACOVA_02011 phosphoenolpyruvate carboxykinase (ATP) — —
Bacteroides stercoris CC31F 0.37 HMPREF1181_RS10745 carboxylating nicotinate-nucleotide diphosphorylase 0.33 HMPREF1181_RS01170 phosphoenolpyruvate carboxykinase (ATP) — —
Phocaeicola vulgatus CL09T03C04 0.37 HMPREF1058_RS15940 carboxylating nicotinate-nucleotide diphosphorylase 0.34 HMPREF1058_RS10065 phosphoenolpyruvate carboxykinase (ATP) — —
Pedobacter sp. GW460-11-11-14-LB5 0.37 CA265_RS14530 nicotinate-nucleotide diphosphorylase (carboxylating) 0.42 CA265_RS23490 phosphoenolpyruvate carboxykinase (ATP) low > 88
Bacteroides thetaiotaomicron VPI-5482 0.37 BT1560 nicotinate-nucleotide pyrophosphorylase (NCBI ptt file) 0.34 BT2790 phosphoenolpyruvate carboxykinase [ATP] (NCBI ptt file) — —
Sphingomonas koreensis DSMZ 15582 0.36 Ga0059261_0061 nicotinate-nucleotide pyrophosphorylase [carboxylating] (EC 2.4.2.19) 0.43 Ga0059261_0913 phosphoenolpyruvate carboxykinase (ATP) — —
Rhizobium sp. OAE497 0.35 ABIE40_RS23265 carboxylating nicotinate-nucleotide diphosphorylase 0.43 ABIE40_RS19415 phosphoenolpyruvate carboxykinase low > 107
Agrobacterium fabrum C58 0.35 Atu4096 nicotinate-nucleotide pyrophosphorylase 0.45 Atu0035 phosphoenolpyruvate carboxykinase low > 89
Fusobacterium nucleatum SB010 0.33 HUW76_10730 carboxylating nicotinate-nucleotide diphosphorylase 0.45 HUW76_06485 phosphoenolpyruvate carboxykinase (ATP) low > 35
Phaeobacter inhibens DSM 17395 0.32 PGA1_c27810 nicotinate-nucleotide pyrophosphorylase 0.41 PGA1_c01140 phosphoenolpyruvate carboxykinase low > 62
Sinorhizobium meliloti 1021 0.32 SMc02598 nicotinate-nucleotide pyrophosphorylase carboxylating protein 0.43 SMc02562 phosphoenolpyruvate carboxykinase low > 103

Not shown: 38 genomes with orthologs for Psest_0718 only; 2 genomes with orthologs for Psest_3988 only