Conservation of cofitness between PS417_19695 and PS417_19865 in Pseudomonas simiae WCS417

41 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_19695 flagellar biosynthesis sigma factor 1.0 PS417_19865 flagellar hook protein FlgK 0.97 8
Pseudomonas fluorescens SBW25 0.99 PFLU_RS21660 RNA polymerase sigma factor FliA 0.79 PFLU_RS21835 flagellar hook-associated protein FlgK 0.94 12
Pseudomonas fluorescens SBW25-INTG 0.99 PFLU_RS21660 RNA polymerase sigma factor FliA 0.79 PFLU_RS21835 flagellar hook-associated protein FlgK 0.97 9
Pseudomonas fluorescens FW300-N2E3 0.97 AO353_18785 flagellar biosynthesis sigma factor 0.48 AO353_18620 flagellar biosynthesis protein FlgK 0.90 1
Pseudomonas fluorescens FW300-N1B4 0.97 Pf1N1B4_3626 RNA polymerase sigma factor for flagellar operon 0.49 Pf1N1B4_3573 Flagellar hook-associated protein FlgK low > 87
Pseudomonas fluorescens GW456-L13 0.97 PfGW456L13_4331 RNA polymerase sigma factor for flagellar operon 0.52 PfGW456L13_4382 Flagellar hook-associated protein FlgK 0.31 15
Pseudomonas fluorescens FW300-N2E2 0.96 Pf6N2E2_2573 RNA polymerase sigma factor for flagellar operon 0.50 Pf6N2E2_2623 Flagellar hook-associated protein FlgK 0.92 10
Pseudomonas fluorescens FW300-N2C3 0.96 AO356_03730 flagellar biosynthesis sigma factor 0.50 AO356_03905 flagellar biosynthesis protein FlgK 0.90 23
Pseudomonas sp. RS175 0.95 PFR28_00852 RNA polymerase sigma factor FliA 0.49 PFR28_00809 hypothetical protein 0.88 21
Pseudomonas syringae pv. syringae B728a 0.95 Psyr_3437 RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG 0.44 Psyr_3471 Flagellar basal body rod protein:Protein of unknown function DUF1078 0.85 11
Pseudomonas syringae pv. syringae B728a ΔmexB 0.95 Psyr_3437 RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG 0.44 Psyr_3471 Flagellar basal body rod protein:Protein of unknown function DUF1078 0.80 4
Pseudomonas putida KT2440 0.91 PP_4341 RNA polymerase sigma 28 (sigma F) factor for class III flagellar operons 0.56 PP_4381 Flagellar hook-associated protein FlgK 0.92 4
Pseudomonas sp. S08-1 0.84 OH686_02730 RNA polymerase sigma factor for flagellar operon 0.38 OH686_02930 flagellar hook-associated protein FlgK 0.90 8
Pseudomonas stutzeri RCH2 0.82 Psest_1740 RNA polymerase sigma factor, FliA/WhiG family 0.32 Psest_2959 flagellar hook-associated protein FlgK 0.89 14
Marinobacter adhaerens HP15 0.58 HP15_2302 flagellar biosynthesis sigma factor FliA 0.26 HP15_1476 flagellar hook-associated protein FlgK 0.83 23
Alteromonas macleodii MIT1002 0.56 MIT1002_01103 Sigma-F factor 0.17 MIT1002_01050 Flagellar hook-associated protein 1 low > 70
Shewanella amazonensis SB2B 0.54 Sama_2280 fliA flagellar biosynthesis sigma factor (RefSeq) 0.15 Sama_2309 flagellar hook-associated protein (RefSeq) 0.70 52
Shewanella loihica PV-4 0.52 Shew_1383 fliA flagellar biosynthesis sigma factor (RefSeq) 0.19 Shew_1354 flagellar hook-associated protein FlgK (RefSeq) 0.94 30
Shewanella sp. ANA-3 0.52 Shewana3_1359 fliA flagellar biosynthesis sigma factor (RefSeq) 0.17 Shewana3_1330 flagellar hook-associated protein FlgK (RefSeq) 0.94 6
Rhodanobacter sp. FW510-T8 0.52 OKGIIK_02830 fliA RNA polymerase sigma factor FliA 0.20 OKGIIK_02700 flgK flagellar hook-associated protein FlgK low > 52
Rhodanobacter denitrificans MT42 0.52 LRK55_RS13320 RNA polymerase sigma factor FliA 0.16 LRK55_RS13190 flagellar hook-associated protein FlgK low > 63
Rhodanobacter denitrificans FW104-10B01 0.52 LRK54_RS13580 RNA polymerase sigma factor FliA 0.16 LRK54_RS13450 flagellar hook-associated protein FlgK low > 59
Vibrio cholerae E7946 ATCC 55056 0.51 CSW01_10335 RNA polymerase sigma factor FliA 0.15 CSW01_11180 flagellar hook-associated protein FlgK 0.88 7
Lysobacter sp. OAE881 0.50 ABIE51_RS16865 RNA polymerase sigma factor FliA 0.20 ABIE51_RS16715 flagellar hook-associated protein FlgK 0.56 24
Dyella japonica UNC79MFTsu3.2 0.49 ABZR86_RS20265 RNA polymerase sigma factor FliA 0.20 ABZR86_RS20120 flagellar hook-associated protein FlgK low > 74
Paraburkholderia sabiae LMG 24235 0.46 QEN71_RS28940 RNA polymerase sigma factor FliA 0.19 QEN71_RS28865 flagellar hook-associated protein FlgK 0.88 32
Paraburkholderia graminis OAS925 0.46 ABIE53_000108 RNA polymerase sigma factor for flagellar operon FliA 0.20 ABIE53_000091 flagellar hook-associated protein 1 FlgK 0.67 48
Burkholderia phytofirmans PsJN 0.45 BPHYT_RS18925 RNA polymerase sigma70 0.14 BPHYT_RS18845 flagellar hook-associated protein FlgK 0.64 27
Paraburkholderia bryophila 376MFSha3.1 0.45 H281DRAFT_05756 RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG 0.18 H281DRAFT_05772 flagellar hook-associated protein 1 FlgK low > 103
Xanthomonas campestris pv. campestris strain 8004 0.44 Xcc-8004.2832.1 RNA polymerase sigma factor for flagellar operon 0.16 Xcc-8004.2788.1 Flagellar hook-associated protein FlgK low > 74
Dickeya dianthicola ME23 0.43 DZA65_RS13835 RNA polymerase sigma factor FliA 0.18 DZA65_RS13965 flagellar hook-associated protein FlgK 0.97 30
Dickeya dianthicola 67-19 0.43 HGI48_RS13350 RNA polymerase sigma factor FliA 0.18 HGI48_RS13480 flagellar hook-associated protein FlgK low > 71
Dickeya dadantii 3937 0.43 DDA3937_RS13300 RNA polymerase sigma factor FliA 0.17 DDA3937_RS13435 flagellar hook-associated protein FlgK 0.95 23
Ralstonia solanacearum UW163 0.42 UW163_RS21665 RNA polymerase sigma factor FliA 0.20 UW163_RS17490 flagellar hook-associated protein FlgK — —
Ralstonia solanacearum IBSBF1503 0.42 RALBFv3_RS17485 RNA polymerase sigma factor FliA 0.20 RALBFv3_RS21695 flagellar hook-associated protein FlgK low > 76
Ralstonia solanacearum GMI1000 0.42 RS_RS23830 RNA polymerase sigma factor FliA 0.21 RS_RS18840 flagellar hook-associated protein FlgK low > 80
Ralstonia solanacearum PSI07 0.42 RPSI07_RS06165 RNA polymerase sigma factor FliA 0.21 RPSI07_RS01435 flagellar hook-associated protein FlgK low > 81
Cupriavidus basilensis FW507-4G11 0.42 RR42_RS35750 DNA-directed RNA polymerase sigma-70 factor 0.23 RR42_RS35680 flagellar hook protein FlgK low > 128
Ralstonia sp. UNC404CL21Col 0.42 ABZR87_RS18040 RNA polymerase sigma factor FliA 0.05 ABZR87_RS22245 flagellar hook-associated protein FlgK 0.87 29
Acidovorax sp. GW101-3H11 0.41 Ac3H11_1381 RNA polymerase sigma factor for flagellar operon 0.14 Ac3H11_1366 Flagellar hook-associated protein FlgK 0.49 21
Hydrogenophaga sp. GW460-11-11-14-LB1 0.40 GFF1428 RNA polymerase sigma factor for flagellar operon 0.16 GFF1406 Flagellar hook-associated protein FlgK low > 90
Variovorax sp. SCN45 0.39 GFF5774 RNA polymerase sigma factor for flagellar operon 0.22 GFF5735 Flagellar hook-associated protein FlgK low > 127

Not shown: 27 genomes with orthologs for PS417_19695 only; 1 genomes with orthologs for PS417_19865 only