Conservation of cofitness between GFF138 and GFF370 in Hydrogenophaga sp. GW460-11-11-14-LB1

55 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Hydrogenophaga sp. GW460-11-11-14-LB1 1.0 GFF138 Hydroxypyruvate isomerase (EC 5.3.1.22) 1.0 GFF370 AMP nucleosidase (EC 3.2.2.4) 0.77 4
Acidovorax sp. GW101-3H11 0.58 Ac3H11_1087 Hydroxypyruvate isomerase (EC 5.3.1.22) 0.79 Ac3H11_4669 AMP nucleosidase (EC 3.2.2.4) low > 79
Paraburkholderia bryophila 376MFSha3.1 0.57 H281DRAFT_00786 hydroxypyruvate isomerase 0.63 H281DRAFT_06027 AMP nucleosidase 0.62 13
Paraburkholderia graminis OAS925 0.56 ABIE53_001999 hydroxypyruvate isomerase 0.63 ABIE53_004847 AMP nucleosidase low > 113
Cupriavidus basilensis FW507-4G11 0.56 RR42_RS19855 hydroxypyruvate isomerase 0.52 RR42_RS21185 AMP nucleosidase low > 128
Burkholderia phytofirmans PsJN 0.56 BPHYT_RS08830 hydroxypyruvate isomerase 0.63 BPHYT_RS33635 AMP nucleosidase low > 109
Castellaniella sp019104865 MT123 0.55 ABCV34_RS12135 hydroxypyruvate isomerase 0.56 ABCV34_RS12200 AMP nucleosidase low > 48
Klebsiella michiganensis M5al 0.55 BWI76_RS06995 hydroxypyruvate isomerase 0.41 BWI76_RS18545 AMP nucleosidase low > 92
Ralstonia sp. UNC404CL21Col 0.55 ABZR87_RS03890 hydroxypyruvate isomerase 0.50 ABZR87_RS17145 AMP nucleosidase low > 80
Variovorax sp. OAS795 0.55 ABID97_RS22325 hydroxypyruvate isomerase 0.76 ABID97_RS00880 AMP nucleosidase low > 91
Ralstonia solanacearum PSI07 0.55 RPSI07_RS08645 hydroxypyruvate isomerase 0.50 RPSI07_RS00695 AMP nucleosidase low > 81
Azospirillum brasilense Sp245 0.55 AZOBR_RS07960 hydroxypyruvate isomerase 0.58 AZOBR_RS14175 AMP nucleosidase low > 97
Paraburkholderia sabiae LMG 24235 0.54 QEN71_RS22540 hydroxypyruvate isomerase 0.63 QEN71_RS17860 AMP nucleosidase low > 153
Sinorhizobium meliloti 1021 0.54 SM_b20680 hydroxypyruvate isomerase 0.55 SMc02386 AMP nucleosidase — —
Rhizobium sp. OAE497 0.54 ABIE40_RS25205 hydroxypyruvate isomerase 0.56 ABIE40_RS05905 AMP nucleosidase low > 107
Ralstonia solanacearum IBSBF1503 0.54 RALBFv3_RS08580 hydroxypyruvate isomerase 0.50 RALBFv3_RS22470 AMP nucleosidase low > 76
Ralstonia solanacearum UW163 0.54 UW163_RS05030 hydroxypyruvate isomerase 0.50 UW163_RS23015 AMP nucleosidase — —
Escherichia coli ECRC101 0.54 MCAODC_27135 hyi hydroxypyruvate isomerase 0.41 MCAODC_20210 amn AMP nucleosidase — —
Escherichia coli ECRC99 0.54 KEDOAH_20050 hyi hydroxypyruvate isomerase 0.41 KEDOAH_02930 amn AMP nucleosidase — —
Escherichia coli ECRC98 0.54 JDDGAC_11565 hyi hydroxypyruvate isomerase 0.41 JDDGAC_29310 amn AMP nucleosidase — —
Escherichia coli ECRC101 0.54 OKFHMN_07920 hyi hydroxypyruvate isomerase 0.41 OKFHMN_25180 amn AMP nucleosidase — —
Escherichia coli ECRC102 0.54 NIAGMN_05970 hyi hydroxypyruvate isomerase 0.41 NIAGMN_22685 amn AMP nucleosidase — —
Escherichia fergusonii Becca 0.53 EFB2_03553 Hydroxypyruvate isomerase 0.41 EFB2_01930 AMP nucleosidase low > 86
Escherichia coli Nissle 1917 0.53 ECOLIN_RS02960 hydroxypyruvate isomerase 0.41 ECOLIN_RS11455 AMP nucleosidase — —
Escherichia coli ECOR27 0.53 NOLOHH_00900 hyi hydroxypyruvate isomerase 0.41 NOLOHH_16125 amn AMP nucleosidase low > 57
Escherichia coli HS(pFamp)R (ATCC 700891) 0.53 OHPLBJKB_03172 Hydroxypyruvate isomerase 0.41 OHPLBJKB_01726 AMP nucleosidase low > 73
Ralstonia solanacearum GMI1000 0.53 RS_RS16445 hydroxypyruvate isomerase 0.50 RS_RS18175 AMP nucleosidase low > 80
Escherichia coli ECRC62 0.53 BNILDI_22330 hyi hydroxypyruvate isomerase 0.41 BNILDI_14920 amn AMP nucleosidase — —
Variovorax sp. SCN45 0.53 GFF1799 Hydroxypyruvate isomerase (EC 5.3.1.22) 0.76 GFF3583 AMP nucleosidase (EC 3.2.2.4) 0.46 59
Rahnella sp. WP5 0.53 EX31_RS04585 hydroxypyruvate isomerase 0.41 EX31_RS17755 AMP nucleosidase low > 89
Escherichia coli ECOR38 0.53 HEPCGN_06555 hyi hydroxypyruvate isomerase 0.41 HEPCGN_03515 amn AMP nucleosidase low > 85
Escherichia coli BL21 0.53 ECD_00458 hydroxypyruvate isomerase 0.41 ECD_01894 AMP nucleosidase — —
Escherichia coli BW25113 0.53 b0508 hyi hydroxypyruvate isomerase (NCBI) 0.41 b1982 amn AMP nucleosidase (NCBI) low > 76
Pseudomonas simiae WCS417 0.53 PS417_08805 hydroxypyruvate isomerase 0.38 PS417_24585 AMP nucleosidase 0.13 51
Pseudomonas fluorescens FW300-N1B4 0.53 Pf1N1B4_3660 Hydroxypyruvate isomerase (EC 5.3.1.22) 0.39 Pf1N1B4_2721 AMP nucleosidase (EC 3.2.2.4) low > 87
Pseudomonas fluorescens GW456-L13 0.52 PfGW456L13_4296 Hydroxypyruvate isomerase (EC 5.3.1.22) 0.39 PfGW456L13_1388 AMP nucleosidase (EC 3.2.2.4) low > 87
Pseudomonas fluorescens SBW25 0.52 PFLU_RS08865 hydroxypyruvate isomerase 0.38 PFLU_RS26515 AMP nucleosidase low > 109
Pseudomonas fluorescens SBW25-INTG 0.52 PFLU_RS08865 hydroxypyruvate isomerase 0.38 PFLU_RS26515 AMP nucleosidase low > 109
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.52 GFF4424 Hydroxypyruvate isomerase (EC 5.3.1.22) 0.42 GFF3974 AMP nucleosidase (EC 3.2.2.4) low > 78
Pseudomonas fluorescens FW300-N2E3 0.52 AO353_01925 hydroxypyruvate isomerase 0.38 AO353_06335 AMP nucleosidase low > 101
Azospirillum sp. SherDot2 0.52 MPMX19_05812 Hydroxypyruvate isomerase 0.57 MPMX19_00597 AMP nucleosidase low > 112
Pseudomonas fluorescens FW300-N2E2 0.52 Pf6N2E2_5838 Hydroxypyruvate isomerase (EC 5.3.1.22) 0.38 Pf6N2E2_5027 AMP nucleosidase (EC 3.2.2.4) low > 103
Pseudomonas putida KT2440 0.52 PP_4298 hydroxypyruvate isomerase 0.38 PP_4779 AMP nucleosidase low > 96
Pseudomonas sp. RS175 0.52 PFR28_03111 Hydroxypyruvate isomerase 0.38 PFR28_03840 AMP nucleosidase 0.21 48
Pseudomonas fluorescens FW300-N2C3 0.51 AO356_19615 hydroxypyruvate isomerase 0.38 AO356_15450 AMP nucleosidase 0.25 20
Pseudomonas stutzeri RCH2 0.49 Psest_1180 hydroxypyruvate isomerase 0.39 Psest_0542 AMP nucleosidase low > 67
Herbaspirillum seropedicae SmR1 0.47 HSERO_RS21140 hydroxypyruvate isomerase 0.60 HSERO_RS19630 AMP nucleosidase low > 78
Pseudomonas syringae pv. syringae B728a 0.45 Psyr_0462 Hydroxypyruvate isomerase 0.39 Psyr_4337 AMP nucleosidase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.45 Psyr_0462 Hydroxypyruvate isomerase 0.39 Psyr_4337 AMP nucleosidase low > 86
Serratia liquefaciens MT49 0.42 IAI46_07590 HPr family phosphocarrier protein 0.41 IAI46_16720 AMP nucleosidase low > 86
Bosea sp. OAE506 0.41 ABIE41_RS11085 2-oxo-tetronate isomerase 0.41 ABIE41_RS04230 AMP nucleosidase low > 77
Pectobacterium carotovorum WPP14 0.39 HER17_RS00550 hydroxypyruvate isomerase family protein 0.41 HER17_RS14005 AMP nucleosidase low > 75
Pantoea sp. MT58 0.38 IAI47_07155 HPr family phosphocarrier protein 0.40 IAI47_07865 AMP nucleosidase low > 76
Dinoroseobacter shibae DFL-12 0.35 Dshi_1554 Hydroxypyruvate isomerase (RefSeq) 0.55 Dshi_3289 AMP nucleosidase (RefSeq) — —
Phaeobacter inhibens DSM 17395 0.32 PGA1_c31800 protein YgbM 0.51 PGA1_c34250 AMP nucleosidase Amn low > 62
Pseudomonas sp. S08-1 0.28 OH686_20930 Hydroxypyruvate isomerase 0.38 OH686_08855 AMP nucleosidase low > 80

Not shown: 6 genomes with orthologs for GFF138 only; 11 genomes with orthologs for GFF370 only