| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas stutzeri RCH2 | 1.0 | Psest_0310 | | The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family | 1.0 | Psest_3228 | | Zn-dependent protease with chaperone function | 0.34 | 17 |
| Pseudomonas sp. S08-1 | 0.84 | OH686_16050 | | Multidrug efflux system, inner membrane proton/drug antiporter (RND type) | 0.73 | OH686_06365 | | Zn-dependent protease with chaperone function | low | > 80 |
| Pseudomonas putida KT2440 | 0.79 | PP_1385 | | Probable efflux pump membrane transporter TtgB | 0.72 | PP_0759 | | conserved exported protein of unknown function | low | > 96 |
| Pseudomonas fluorescens FW300-N2E2 | 0.78 | Pf6N2E2_2824 | | RND efflux system, inner membrane transporter CmeB | 0.72 | Pf6N2E2_3249 | | Zn-dependent protease with chaperone function | low | > 103 |
| Pseudomonas fluorescens FW300-N2C3 | 0.78 | AO356_04880 | | multidrug transporter | 0.71 | AO356_06950 | | peptidase M48 | low | > 104 |
| Pseudomonas fluorescens FW300-N2E3 | 0.78 | AO353_17295 | | multidrug transporter | 0.73 | AO353_14985 | | peptidase M48 | low | > 101 |
| Pseudomonas fluorescens FW300-N1B4 | 0.78 | Pf1N1B4_3246 | | RND efflux system, inner membrane transporter CmeB | 0.72 | Pf1N1B4_2951 | | Zn-dependent protease with chaperone function | low | > 87 |
| Pseudomonas sp. RS175 | 0.77 | PFR28_00631 | | putative efflux pump membrane transporter TtgB | 0.72 | PFR28_03625 | | Metalloprotease LoiP | 0.24 | 51 |
| Pseudomonas fluorescens GW456-L13 | 0.77 | PfGW456L13_4581 | | RND efflux system, inner membrane transporter CmeB | 0.72 | PfGW456L13_1614 | | Zn-dependent protease with chaperone function | low | > 87 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.77 | Psyr_4008 | | Hydrophobe/amphiphile efflux-1 HAE1 | 0.69 | Psyr_0984 | | Peptidase M48, Ste24p | — | — |
| Pseudomonas syringae pv. syringae B728a | 0.77 | Psyr_4008 | | Hydrophobe/amphiphile efflux-1 HAE1 | 0.69 | Psyr_0984 | | Peptidase M48, Ste24p | low | > 86 |
| Pseudomonas simiae WCS417 | 0.75 | PS417_06770 | | multidrug transporter | 0.70 | PS417_04515 | | peptidase M48 | low | > 88 |
| Pseudomonas fluorescens SBW25-INTG | 0.75 | PFLU_RS06805 | | efflux RND transporter permease subunit | 0.71 | PFLU_RS04560 | | M48 family metalloprotease | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.75 | PFLU_RS06805 | | efflux RND transporter permease subunit | 0.71 | PFLU_RS04560 | | M48 family metalloprotease | low | > 109 |
| Serratia liquefaciens MT49 | 0.66 | IAI46_16735 | | efflux RND transporter permease subunit | 0.16 | IAI46_21050 | | M48 family metallopeptidase | low | > 86 |
| Klebsiella michiganensis M5al | 0.65 | BWI76_RS06775 | | multidrug efflux RND transporter permease subunit | 0.14 | BWI76_RS09765 | | metalloprotease | low | > 92 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.65 | GFF4379 | | RND efflux system, inner membrane transporter CmeB | 0.13 | GFF3029 | | Putative metalloprotease yggG (EC 3.4.24.-) | low | > 78 |
| Azospirillum brasilense Sp245 | 0.65 | AZOBR_RS30185 | | multidrug transporter | 0.22 | AZOBR_RS23595 | | peptidase M48 Ste24p | low | > 97 |
| Shewanella sp. ANA-3 | 0.64 | Shewana3_4045 | | hydrophobe/amphiphile efflux-1 (HAE1) family protein (RefSeq) | 0.27 | Shewana3_0964 | | peptidase M48, Ste24p (RefSeq) | low | > 73 |
| Shewanella oneidensis MR-1 | 0.64 | SO4692 | | AcrB/AcrD/AcrF family protein (NCBI ptt file) | 0.27 | SO1137 | | conserved hypothetical protein (NCBI ptt file) | low | > 76 |
| Shewanella amazonensis SB2B | 0.64 | Sama_3554 | | AcrB/AcrD/AcrF family protein (RefSeq) | 0.29 | Sama_2507 | | hypothetical protein (RefSeq) | low | > 62 |
| Shewanella loihica PV-4 | 0.63 | Shew_0032 | | hydrophobe/amphiphile efflux-1 (HAE1) family protein (RefSeq) | 0.30 | Shew_2842 | | peptidase M48, Ste24p (RefSeq) | low | > 60 |
| Burkholderia phytofirmans PsJN | 0.63 | BPHYT_RS16170 | | multidrug efflux RND transporter permease subunit | 0.26 | BPHYT_RS01575 | | peptidase M48 | — | — |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.63 | DVU2816 | | multidrug resistance protein (TIGR) | 0.24 | DVU3388 | | lipoprotein, putative (TIGR) | low | > 55 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.62 | Xcc-8004.1794.1 | | RND efflux system, inner membrane transporter CmeB | 0.24 | Xcc-8004.9.1 | | Zn-dependent protease with chaperone function | low | > 74 |
| Rhodospirillum rubrum S1H | 0.62 | Rru_A2051 | | Hydrophobe/amphiphile efflux-1 HAE1 (NCBI) | 0.25 | Rru_A2450 | | Peptidase M48, Ste24p (NCBI) | low | > 58 |
| Caulobacter crescentus NA1000 | 0.61 | CCNA_00850 | | cation/multidrug efflux pump acrB2 | 0.15 | CCNA_00921 | | zinc metalloprotease | low | > 66 |
| Caulobacter crescentus NA1000 Δfur | 0.61 | CCNA_00850 | | cation/multidrug efflux pump acrB2 | 0.15 | CCNA_00921 | | zinc metalloprotease | low | > 67 |
| Herbaspirillum seropedicae SmR1 | 0.61 | HSERO_RS06815 | | multidrug transporter | 0.49 | HSERO_RS16520 | | peptidase M48 | low | > 78 |
| Acinetobacter radioresistens SK82 | 0.59 | MPMX26_00689 | | Multidrug resistance protein MexB | 0.30 | MPMX26_01092 | | Metalloprotease LoiP | low | > 36 |
| Variovorax sp. SCN45 | 0.59 | GFF5990 | | RND efflux system, inner membrane transporter | 0.36 | GFF5070 | | Zn-dependent protease with chaperone function | low | > 127 |
| Alteromonas macleodii MIT1002 | 0.56 | MIT1002_00135 | | Multidrug-efflux transporter MexB | 0.23 | MIT1002_03052 | | TPR repeat-containing protein YfgC precursor | low | > 70 |
| Variovorax sp. OAS795 | 0.53 | ABID97_RS00325 | | efflux RND transporter permease subunit | 0.37 | ABID97_RS03835 | | M48 family metallopeptidase | — | — |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.52 | GFF3840 | | RND efflux system, inner membrane transporter CmeB | 0.38 | GFF1870 | | Zn-dependent protease with chaperone function | low | > 90 |
| Acidovorax sp. GW101-3H11 | 0.51 | Ac3H11_4448 | | RND efflux system, inner membrane transporter CmeB | 0.37 | Ac3H11_3357 | | Zn-dependent protease with chaperone function PA4632 | low | > 79 |
| Castellaniella sp019104865 MT123 | 0.48 | ABCV34_RS04225 | | efflux RND transporter permease subunit | 0.48 | ABCV34_RS04295 | | M48 family metallopeptidase | low | > 48 |
| Dechlorosoma suillum PS | 0.46 | Dsui_3182 | | hydrophobe/amphiphile efflux-1 (HAE1) family transporter | 0.38 | Dsui_0033 | | Zn-dependent protease with chaperone function | — | — |
| Rhodanobacter sp. FW510-T8 | 0.46 | OKGIIK_09170 | | Efflux pump membrane transporter | 0.25 | OKGIIK_04060 | bepA | peptidase | low | > 52 |
| Rhodanobacter denitrificans FW104-10B01 | 0.46 | LRK54_RS02100 | | multidrug efflux RND transporter permease subunit | 0.25 | LRK54_RS15295 | | M48 family metallopeptidase | low | > 59 |
| Rhodanobacter denitrificans MT42 | 0.45 | LRK55_RS01875 | | multidrug efflux RND transporter permease subunit | 0.25 | LRK55_RS15010 | | M48 family metallopeptidase | low | > 63 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.36 | ABZR88_RS12545 | | efflux RND transporter permease subunit | 0.28 | ABZR88_RS15705 | | M48 family metallopeptidase | low | > 71 |
| Pedobacter sp. GW460-11-11-14-LB5 | 0.33 | CA265_RS23010 | | hydrophobe/amphiphile efflux-1 family RND transporter | 0.24 | CA265_RS14520 | | peptidase M48 | low | > 88 |
Not shown: 43 genomes with orthologs for Psest_0310 only; 6 genomes with orthologs for Psest_3228 only