Conservation of cofitness between GFF3555 and GFF3049 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

54 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 1.0 GFF3555 1,4-dihydroxy-2-naphthoyl-CoA hydrolase (EC 3.1.2.28) in menaquinone biosynthesis 1.0 GFF3049 Glutathione synthetase (EC 6.3.2.3) 0.48 16
Escherichia coli ECOR38 0.93 HEPCGN_05620 menI 1,4-dihydroxy-2-naphthoyl-CoA hydrolase 0.92 HEPCGN_18580 gshB glutathione synthase low > 87
Escherichia coli Nissle 1917 0.93 ECOLIN_RS09425 1,4-dihydroxy-2-naphthoyl-CoA hydrolase 0.94 ECOLIN_RS16395 glutathione synthase
Escherichia fergusonii Becca 0.93 EFB2_02306 1,4-dihydroxy-2-naphthoyl-CoA hydrolase 0.94 EFB2_00955 Glutathione synthetase low > 86
Escherichia coli ECOR27 0.93 NOLOHH_17755 menI 1,4-dihydroxy-2-naphthoyl-CoA hydrolase 0.92 NOLOHH_11145 gshB glutathione synthase low > 75
Escherichia coli BW25113 0.92 b1686 ydiI hypothetical protein (NCBI) 0.92 b2947 gshB glutathione synthetase (NCBI) low > 76
Escherichia coli ECRC62 0.92 BNILDI_16545 menI 1,4-dihydroxy-2-naphthoyl-CoA hydrolase 0.92 BNILDI_09725 gshB glutathione synthase low > 75
Escherichia coli BL21 0.92 ECD_01655 1,4-dihydroxy-2-naphthoyl-CoA hydrolase 0.92 ECD_02777 glutathione synthetase low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.92 OHPLBJKB_02038 1,4-dihydroxy-2-naphthoyl-CoA hydrolase 0.92 OHPLBJKB_00771 Glutathione synthetase low > 73
Escherichia coli ECRC99 0.91 KEDOAH_00875 menI 1,4-dihydroxy-2-naphthoyl-CoA hydrolase 0.92 KEDOAH_08865 gshB glutathione synthase
Escherichia coli ECRC98 0.91 JDDGAC_01810 menI 1,4-dihydroxy-2-naphthoyl-CoA hydrolase 0.92 JDDGAC_22905 gshB glutathione synthase low > 86
Escherichia coli ECRC100 0.91 OKFHMN_27235 menI 1,4-dihydroxy-2-naphthoyl-CoA hydrolase 0.92 OKFHMN_19275 gshB glutathione synthase low > 80
Escherichia coli ECRC102 0.91 NIAGMN_00830 menI 1,4-dihydroxy-2-naphthoyl-CoA hydrolase 0.92 NIAGMN_17040 gshB glutathione synthase
Escherichia coli ECRC101 0.91 MCAODC_18175 menI 1,4-dihydroxy-2-naphthoyl-CoA hydrolase 0.92 MCAODC_09795 gshB glutathione synthase 0.44 81
Enterobacter sp. TBS_079 0.88 MPMX20_01927 1,4-dihydroxy-2-naphthoyl-CoA hydrolase 0.95 MPMX20_03805 Glutathione synthetase low > 85
Enterobacter asburiae PDN3 0.87 EX28DRAFT_1695 uncharacterized domain 1 0.94 EX28DRAFT_2985 glutathione synthase (EC 6.3.2.3) low > 76
Klebsiella michiganensis M5al 0.85 BWI76_RS17045 hypothetical protein 0.93 BWI76_RS24075 glutathione synthase low > 92
Serratia liquefaciens MT49 0.76 IAI46_11135 1,4-dihydroxy-2-naphthoyl-CoA hydrolase 0.83 IAI46_21390 glutathione synthase low > 86
Pectobacterium carotovorum WPP14 0.73 HER17_RS08910 1,4-dihydroxy-2-naphthoyl-CoA hydrolase 0.82 HER17_RS02635 glutathione synthase low > 75
Dickeya dadantii 3937 0.72 DDA3937_RS12790 hotdog fold thioesterase 0.82 DDA3937_RS18560 glutathione synthase low > 74
Dickeya dianthicola ME23 0.72 DZA65_RS13320 hotdog fold thioesterase 0.83 DZA65_RS19630 glutathione synthase low > 75
Dickeya dianthicola 67-19 0.72 HGI48_RS12855 hotdog fold thioesterase 0.83 HGI48_RS18495 glutathione synthase
Erwinia tracheiphila SCR3 0.71 LU632_RS11045 hotdog fold thioesterase 0.86 LU632_RS05480 gshB glutathione synthase
Rahnella sp. WP5 0.69 EX31_RS13920 hotdog fold thioesterase 0.84 EX31_RS02665 glutathione synthase low > 89
Pseudomonas fluorescens SBW25-INTG 0.55 PFLU_RS09075 hotdog fold thioesterase 0.65 PFLU_RS28320 glutathione synthase low > 109
Pseudomonas fluorescens SBW25 0.55 PFLU_RS09075 hotdog fold thioesterase 0.65 PFLU_RS28320 glutathione synthase low > 109
Pseudomonas simiae WCS417 0.55 PS417_09020 esterase 0.65 PS417_26675 glutathione synthetase
Pseudomonas sp. RS175 0.54 PFR28_03073 Putative esterase 0.64 PFR28_04232 Glutathione synthetase low > 88
Pseudomonas fluorescens FW300-N2E2 0.53 Pf6N2E2_5878 FIG002571: 4-hydroxybenzoyl-CoA thioesterase domain protein 0.65 Pf6N2E2_4612 Glutathione synthetase (EC 6.3.2.3) low > 103
Pseudomonas stutzeri RCH2 0.53 Psest_2468 uncharacterized domain 1 0.61 Psest_0296 glutathione synthetase, prokaryotic low > 67
Vibrio cholerae E7946 ATCC 55056 0.52 CSW01_17125 esterase 0.77 CSW01_02490 glutathione synthetase low > 62
Pseudomonas fluorescens FW300-N2C3 0.52 AO356_19810 esterase 0.65 AO356_13475 glutathione synthetase low > 104
Pseudomonas fluorescens GW456-L13 0.52 PfGW456L13_2050 FIG002571: 4-hydroxybenzoyl-CoA thioesterase domain protein 0.65 PfGW456L13_1021 Glutathione synthetase (EC 6.3.2.3) low > 87
Pseudomonas fluorescens FW300-N1B4 0.51 Pf1N1B4_3522 FIG002571: 4-hydroxybenzoyl-CoA thioesterase domain protein 0.65 Pf1N1B4_2352 Glutathione synthetase (EC 6.3.2.3)
Pseudomonas syringae pv. syringae B728a ΔmexB 0.51 Psyr_2025 Phenylacetic acid degradation-related protein 0.66 Psyr_0487 glutathione synthase low > 86
Pseudomonas syringae pv. syringae B728a 0.51 Psyr_2025 Phenylacetic acid degradation-related protein 0.66 Psyr_0487 glutathione synthase low > 86
Dyella japonica UNC79MFTsu3.2 0.51 ABZR86_RS16920 hotdog fold thioesterase 0.54 ABZR86_RS10370 glutathione synthase
Lysobacter sp. OAE881 0.51 ABIE51_RS01500 hotdog fold thioesterase 0.57 ABIE51_RS05210 glutathione synthase
Pseudomonas fluorescens FW300-N2E3 0.50 AO353_01715 esterase 0.64 AO353_08110 glutathione synthetase low > 101
Acidovorax sp. GW101-3H11 0.50 Ac3H11_4896 uncharacterized domain 1 0.47 Ac3H11_711 Glutathione synthetase (EC 6.3.2.3) low > 79
Rhodanobacter sp. FW510-T8 0.49 OKGIIK_16735 esterase 0.54 OKGIIK_11075 gshB glutathione synthase low > 52
Rhodanobacter denitrificans FW104-10B01 0.49 LRK54_RS06895 hotdog fold thioesterase 0.53 LRK54_RS04200 glutathione synthase
Rhodanobacter denitrificans MT42 0.49 LRK55_RS06640 hotdog fold thioesterase 0.53 LRK55_RS03970 glutathione synthase
Hydrogenophaga sp. GW460-11-11-14-LB1 0.47 GFF2002 uncharacterized domain 1 0.48 GFF2650 Glutathione synthetase (EC 6.3.2.3) low > 90
Cupriavidus basilensis FW507-4G11 0.47 RR42_RS01500 hypothetical protein 0.45 RR42_RS01780 glutathione synthetase low > 128
Variovorax sp. OAS795 0.46 ABID97_RS03015 hotdog fold thioesterase 0.48 ABID97_RS04630 glutathione synthase low > 91
Variovorax sp. SCN45 0.46 GFF3369 1,4-dihydroxy-2-naphthoyl-CoA hydrolase (EC 3.1.2.28) in menaquinone biosynthesis 0.46 GFF6322 Glutathione synthetase (EC 6.3.2.3) 0.64 26
Shewanella loihica PV-4 0.41 Shew_3192 hypothetical protein (RefSeq) 0.73 Shew_3225 glutathione synthetase (RefSeq) low > 60
Shewanella amazonensis SB2B 0.41 Sama_2944 hypothetical protein (RefSeq) 0.73 Sama_0574 glutathione synthetase (RefSeq) low > 62
Shewanella oneidensis MR-1 0.40 SO1068 conserved hypothetical protein (NCBI ptt file) 0.72 SO0831 gshB glutathione synthetase (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.40 Shewana3_0906 hypothetical protein (RefSeq) 0.74 Shewana3_3445 glutathione synthetase (RefSeq) low > 73
Paraburkholderia sabiae LMG 24235 0.23 QEN71_RS25080 PaaI family thioesterase 0.47 QEN71_RS01415 glutathione synthase low > 153
Paraburkholderia graminis OAS925 0.20 ABIE53_001257 1,4-dihydroxy-2-naphthoyl-CoA hydrolase 0.48 ABIE53_000657 glutathione synthase low > 113
Burkholderia phytofirmans PsJN 0.19 BPHYT_RS04910 phenylacetic acid degradation protein 0.47 BPHYT_RS02560 glutathione synthetase low > 109
Paraburkholderia bryophila 376MFSha3.1 0.19 H281DRAFT_00147 uncharacterized domain 1-containing protein 0.47 H281DRAFT_02010 glutathione synthase low > 103

Not shown: 4 genomes with orthologs for GFF3555 only; 33 genomes with orthologs for GFF3049 only