Conservation of cofitness between HP15_2116 and HP15_2935 in Marinobacter adhaerens HP15

55 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Marinobacter adhaerens HP15 1.0 HP15_2116 PP-loop domain protein 1.0 HP15_2935 SpoVR family protein 0.42 20
Pantoea sp. MT58 0.66 IAI47_09475 tRNA 2-thiocytidine(32) synthetase TtcA 0.67 IAI47_08885 SpoVR family protein low > 76
Dickeya dianthicola ME23 0.66 DZA65_RS12850 tRNA 2-thiocytidine(32) synthetase TtcA 0.69 DZA65_RS11545 SpoVR family protein low > 75
Shewanella amazonensis SB2B 0.66 Sama_1801 hypothetical protein (RefSeq) 0.70 Sama_1923 ycgB component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) low > 62
Shewanella sp. ANA-3 0.66 Shewana3_2117 PP-loop domain-containing protein (RefSeq) 0.68 Shewana3_1636 SpoVR family protein (RefSeq) low > 73
Dickeya dianthicola 67-19 0.65 HGI48_RS12410 tRNA 2-thiocytidine(32) synthetase TtcA 0.69 HGI48_RS11200 SpoVR family protein low > 71
Escherichia coli HS(pFamp)R (ATCC 700891) 0.65 OHPLBJKB_02337 tRNA-cytidine(32) 2-sulfurtransferase 0.69 OHPLBJKB_02501 hypothetical protein low > 73
Escherichia coli ECRC99 0.65 KEDOAH_26600 ttcA tRNA 2-thiocytidine(32) synthetase TtcA 0.69 KEDOAH_25300 ycgB SpoVR family protein — —
Escherichia coli ECRC62 0.65 BNILDI_18020 ttcA tRNA 2-thiocytidine(32) synthetase TtcA 0.69 BNILDI_18895 ycgB SpoVR family protein — —
Escherichia coli ECRC101 0.65 MCAODC_16100 ttcA tRNA 2-thiocytidine(32) synthetase TtcA 0.69 MCAODC_21885 ycgB SpoVR family protein — —
Escherichia coli ECOR38 0.65 HEPCGN_26005 ttcA tRNA 2-thiocytidine(32) synthetase TtcA 0.69 HEPCGN_24745 ycgB SpoVR family protein low > 85
Escherichia coli ECRC101 0.65 OKFHMN_02155 ttcA tRNA 2-thiocytidine(32) synthetase TtcA 0.69 OKFHMN_28285 ycgB SpoVR family protein — —
Escherichia coli Nissle 1917 0.65 ECOLIN_RS08065 tRNA 2-thiocytidine(32) synthetase TtcA 0.69 ECOLIN_RS07180 SpoVR family protein — —
Klebsiella michiganensis M5al 0.65 BWI76_RS12710 tRNA 2-thiocytidine(32) synthetase TtcA 0.69 BWI76_RS17740 SpoVR family protein low > 92
Escherichia coli ECOR27 0.65 NOLOHH_19870 ttcA tRNA 2-thiocytidine(32) synthetase TtcA 0.69 NOLOHH_20730 ycgB SpoVR family protein — —
Dickeya dadantii 3937 0.65 DDA3937_RS12330 tRNA 2-thiocytidine(32) synthetase TtcA 0.69 DDA3937_RS11175 SpoVR family protein low > 74
Escherichia coli BL21 0.65 ECD_01321 tRNA s(2)C32 thioltransferase, iron sulfur cluster protein 0.69 ECD_01163 SpoVR family stationary phase protein low > 60
Escherichia fergusonii Becca 0.65 EFB2_02583 tRNA-cytidine(32) 2-sulfurtransferase 0.69 EFB2_02744 hypothetical protein low > 86
Escherichia coli ECRC102 0.65 NIAGMN_26325 ttcA tRNA 2-thiocytidine(32) synthetase TtcA 0.69 NIAGMN_27935 ycgB SpoVR family protein — —
Escherichia coli BW25113 0.65 b1344 ydaO predicted C32 tRNA thiolase (NCBI) 0.69 b1188 ycgB ycgB component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) low > 76
Pectobacterium carotovorum WPP14 0.65 HER17_RS09605 tRNA 2-thiocytidine(32) synthetase TtcA 0.69 HER17_RS11210 SpoVR family protein low > 75
Escherichia coli ECRC98 0.65 JDDGAC_04715 ttcA tRNA 2-thiocytidine(32) synthetase TtcA 0.69 JDDGAC_06225 ycgB SpoVR family protein — —
Vibrio cholerae E7946 ATCC 55056 0.65 CSW01_07180 tRNA 2-thiocytidine(32) synthetase TtcA 0.67 CSW01_09390 SpoVR family protein low > 62
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.65 GFF2648 tRNA(Cytosine32)-2-thiocytidine synthetase 0.69 GFF2805 FIG004684: SpoVR-like protein low > 78
Pseudomonas stutzeri RCH2 0.65 Psest_3033 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control 0.75 Psest_3674 Uncharacterized conserved protein low > 67
Shewanella oneidensis MR-1 0.65 SO2354 conserved hypothetical protein (NCBI ptt file) 0.68 SO2884 ycgB component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) low > 76
Rahnella sp. WP5 0.65 EX31_RS06375 tRNA 2-thiocytidine(32) synthetase TtcA 0.69 EX31_RS10500 SpoVR family protein low > 89
Enterobacter asburiae PDN3 0.65 EX28DRAFT_1007 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control 0.68 EX28DRAFT_0765 Uncharacterized conserved protein low > 76
Serratia liquefaciens MT49 0.65 IAI46_13420 tRNA 2-thiocytidine(32) synthetase TtcA 0.69 IAI46_14470 SpoVR family protein 0.35 70
Shewanella loihica PV-4 0.64 Shew_1995 PP-loop domain-containing protein (RefSeq) 0.67 Shew_1831 hypothetical protein (RefSeq) low > 60
Enterobacter sp. TBS_079 0.64 MPMX20_02440 tRNA-cytidine(32) 2-sulfurtransferase 0.69 MPMX20_02700 hypothetical protein low > 85
Pseudomonas sp. S08-1 0.64 OH686_05145 tRNA-(cytosine32)-2-thiocytidine synthetase TtcA 0.74 OH686_15010 SpoVR-like protein low > 80
Alteromonas macleodii MIT1002 0.64 MIT1002_02139 tRNA 2-thiocytidine biosynthesis protein TtcA 0.67 MIT1002_01231 SpoVR family protein low > 70
Pseudomonas syringae pv. syringae B728a 0.63 Psyr_3705 conserved hypothetical protein 0.74 Psyr_4633 SpoVR low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.63 Psyr_3705 conserved hypothetical protein 0.74 Psyr_4633 SpoVR low > 86
Pseudomonas fluorescens FW300-N1B4 0.63 Pf1N1B4_3491 tRNA(Cytosine32)-2-thiocytidine synthetase 0.73 Pf1N1B4_2521 FIG004684: SpoVR-like protein low > 87
Pseudomonas putida KT2440 0.63 PP_1641 tRNA 2-thiocytidine biosynthesis protein TtcA 0.72 PP_0395 putative type IV piliation protein low > 96
Pseudomonas sp. RS175 0.63 PFR28_03236 tRNA-cytidine(32) 2-sulfurtransferase 0.74 PFR28_04070 hypothetical protein low > 88
Pseudomonas fluorescens FW300-N2E3 0.63 AO353_02780 tRNA 2-thiocytidine biosynthesis protein TtcA 0.72 AO353_07345 ycgB component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) low > 101
Pseudomonas simiae WCS417 0.63 PS417_16415 tRNA 2-thiocytidine biosynthesis protein TtcA 0.73 PS417_25840 SpoVR family protein low > 88
Pseudomonas fluorescens FW300-N2E2 0.63 Pf6N2E2_5711 tRNA(Cytosine32)-2-thiocytidine synthetase 0.72 Pf6N2E2_4799 ycgB component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) low > 103
Erwinia tracheiphila SCR3 0.62 LU632_RS12165 ttcA tRNA 2-thiocytidine(32) synthetase TtcA 0.68 LU632_RS13075 SpoVR family protein low > 74
Pseudomonas fluorescens FW300-N2C3 0.62 AO356_19000 tRNA 2-thiocytidine biosynthesis protein TtcA 0.73 AO356_14305 ycgB component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) low > 104
Pseudomonas fluorescens GW456-L13 0.62 PfGW456L13_2020 tRNA(Cytosine32)-2-thiocytidine synthetase 0.73 PfGW456L13_1194 FIG004684: SpoVR-like protein low > 87
Pseudomonas fluorescens SBW25-INTG 0.62 PFLU_RS18455 tRNA 2-thiocytidine(32) synthetase TtcA 0.73 PFLU_RS27495 SpoVR family protein low > 109
Pseudomonas fluorescens SBW25 0.62 PFLU_RS18455 tRNA 2-thiocytidine(32) synthetase TtcA 0.73 PFLU_RS27495 SpoVR family protein low > 109
Paraburkholderia graminis OAS925 0.60 ABIE53_000036 tRNA 2-thiocytidine biosynthesis protein TtcA 0.67 ABIE53_002316 stage V sporulation protein R low > 113
Paraburkholderia sabiae LMG 24235 0.60 QEN71_RS28595 tRNA 2-thiocytidine(32) synthetase TtcA 0.67 QEN71_RS07385 SpoVR family protein low > 153
Acidovorax sp. GW101-3H11 0.60 Ac3H11_1817 tRNA(Cytosine32)-2-thiocytidine synthetase 0.63 Ac3H11_1147 FIG004684: SpoVR-like protein low > 79
Variovorax sp. SCN45 0.60 GFF7310 tRNA-(cytosine32)-2-thiocytidine synthetase TtcA 0.68 GFF2935 FIG004684: SpoVR-like protein low > 127
Paraburkholderia bryophila 376MFSha3.1 0.59 H281DRAFT_05824 tRNA s(2)C-32 sulfurtransferase 0.67 H281DRAFT_05234 Stage V sporulation protein SpoVR/YcgB, involved in spore cortex formation low > 103
Herbaspirillum seropedicae SmR1 0.56 HSERO_RS22035 tRNA 2-thiocytidine biosynthesis protein TtcA 0.67 HSERO_RS21700 SpoVR family protein low > 78
Castellaniella sp019104865 MT123 0.55 ABCV34_RS10450 tRNA 2-thiocytidine(32) synthetase TtcA 0.13 ABCV34_RS05550 SpoVR family protein 0.21 32
Sinorhizobium meliloti 1021 0.45 SMc00534 C32 tRNA thiolase 0.52 SMc01265 SpoVR family protein low > 103
Rhizobium sp. OAE497 0.44 ABIE40_RS10230 tRNA 2-thiocytidine(32) synthetase TtcA 0.47 ABIE40_RS12540 SpoVR family protein low > 107
Phaeobacter inhibens DSM 17395 0.43 PGA1_c02110 tRNA 2-thiocytidine biosynthesis protein TtcA 0.51 PGA1_c02490 sporulation protein R-like protein low > 62

Not shown: 18 genomes with orthologs for HP15_2116 only; 7 genomes with orthologs for HP15_2935 only