Conservation of cofitness between Psest_3960 and Psest_2775 in Pseudomonas stutzeri RCH2

58 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_3960 3'(2'),5'-bisphosphate nucleotidase, bacterial 1.0 Psest_2775 Glycerol-3-phosphate dehydrogenase 0.26 4
Pseudomonas fluorescens SBW25-INTG 0.69 PFLU_RS01390 3'(2'),5'-bisphosphate nucleotidase CysQ 0.68 PFLU_RS05650 glycerol-3-phosphate dehydrogenase
Pseudomonas fluorescens SBW25 0.69 PFLU_RS01390 3'(2'),5'-bisphosphate nucleotidase CysQ 0.68 PFLU_RS05650 glycerol-3-phosphate dehydrogenase low > 109
Pseudomonas sp. S08-1 0.68 OH686_14315 3'(2'),5'-bisphosphate nucleotidase 0.68 OH686_20360 Aerobic glycerol-3-phosphate dehydrogenase
Pseudomonas simiae WCS417 0.68 PS417_01295 adenosine-3'(2'),5'-bisphosphate nucleotidase 0.69 PS417_05565 glycerol-3-phosphate dehydrogenase
Pseudomonas putida KT2440 0.67 PP_0261 adenosine-3'(2'),5'-bisphosphate nucleotidase 0.67 PP_1073 glycerol-3-phosphate dehydrogenase (aerobic)
Pseudomonas syringae pv. syringae B728a 0.66 Psyr_4940 3'(2'),5'-bisphosphate nucleotidase 0.71 Psyr_3907 homodimeric glycerol 3-phosphate dehydrogenase (quinone)
Pseudomonas syringae pv. syringae B728a ΔmexB 0.66 Psyr_4940 3'(2'),5'-bisphosphate nucleotidase 0.71 Psyr_3907 homodimeric glycerol 3-phosphate dehydrogenase (quinone)
Pseudomonas fluorescens FW300-N2E3 0.65 AO353_11850 3'(2'),5'-bisphosphate nucleotidase CysQ 0.69 AO353_04190 glycerol-3-phosphate dehydrogenase low > 101
Pseudomonas fluorescens GW456-L13 0.65 PfGW456L13_403 3'(2'),5'-bisphosphate nucleotidase (EC 3.1.3.7) 0.68 PfGW456L13_1732 Aerobic glycerol-3-phosphate dehydrogenase (EC 1.1.5.3)
Pseudomonas fluorescens FW300-N1B4 0.65 Pf1N1B4_1668 3'(2'),5'-bisphosphate nucleotidase (EC 3.1.3.7) 0.68 Pf1N1B4_769 Aerobic glycerol-3-phosphate dehydrogenase (EC 1.1.5.3) low > 87
Pseudomonas fluorescens FW300-N2C3 0.63 AO356_10075 3'(2'),5'-bisphosphate nucleotidase CysQ 0.68 AO356_18235 glycerol-3-phosphate dehydrogenase
Pseudomonas fluorescens FW300-N2E2 0.62 Pf6N2E2_3885 3'(2'),5'-bisphosphate nucleotidase (EC 3.1.3.7) 0.68 Pf6N2E2_5572 Aerobic glycerol-3-phosphate dehydrogenase (EC 1.1.5.3)
Pseudomonas sp. RS175 0.62 PFR28_04887 '3'(2'),5'-bisphosphate nucleotidase CysQ' transl_table=11 0.68 PFR28_03370 Aerobic glycerol-3-phosphate dehydrogenase
Rhodanobacter denitrificans FW104-10B01 0.37 LRK54_RS04130 3'(2'),5'-bisphosphate nucleotidase CysQ 0.15 LRK54_RS15405 glycerol-3-phosphate dehydrogenase/oxidase low > 59
Xanthomonas campestris pv. campestris strain 8004 0.36 Xcc-8004.1562.1 3'(2'),5'-bisphosphate nucleotidase (EC 3.1.3.7) 0.47 Xcc-8004.471.1 Aerobic glycerol-3-phosphate dehydrogenase (EC 1.1.5.3) low > 74
Marinobacter adhaerens HP15 0.36 HP15_2405 3'(2'), 5'-bisphosphate nucleotidase 0.50 HP15_2168 FAD dependent oxidoreductase
Rahnella sp. WP5 0.36 EX31_RS08720 3'(2'),5'-bisphosphate nucleotidase CysQ 0.56 EX31_RS05000 glycerol-3-phosphate dehydrogenase low > 89
Alteromonas macleodii MIT1002 0.36 MIT1002_01272 3'(2'),5'-bisphosphate nucleotidase CysQ 0.48 MIT1002_00200 Aerobic glycerol-3-phosphate dehydrogenase
Dyella japonica UNC79MFTsu3.2 0.35 ABZR86_RS10205 3'(2'),5'-bisphosphate nucleotidase CysQ 0.49 ABZR86_RS20025 glycerol-3-phosphate dehydrogenase low > 74
Enterobacter asburiae PDN3 0.35 EX28DRAFT_3401 3'(2'),5'-bisphosphate nucleotidase, bacterial 0.53 EX28DRAFT_4120 Glycerol-3-phosphate dehydrogenase low > 76
Enterobacter sp. TBS_079 0.35 MPMX20_00492 3'(2'),5'-bisphosphate nucleotidase CysQ 0.52 MPMX20_04309 Aerobic glycerol-3-phosphate dehydrogenase low > 85
Pantoea sp. MT58 0.35 IAI47_02695 3'(2'),5'-bisphosphate nucleotidase CysQ 0.53 IAI47_01750 glycerol-3-phosphate dehydrogenase low > 76
Vibrio cholerae E7946 ATCC 55056 0.34 CSW01_13735 3'(2'),5'-bisphosphate nucleotidase CysQ 0.52 CSW01_17495 glycerol-3-phosphate dehydrogenase low > 62
Dickeya dadantii 3937 0.34 DDA3937_RS17180 3'(2'),5'-bisphosphate nucleotidase CysQ 0.53 DDA3937_RS19720 glycerol-3-phosphate dehydrogenase
Serratia liquefaciens MT49 0.34 IAI46_01745 3'(2'),5'-bisphosphate nucleotidase CysQ 0.53 IAI46_23915 glycerol-3-phosphate dehydrogenase 0.58 18
Erwinia tracheiphila SCR3 0.34 LU632_RS02085 cysQ 3'(2'),5'-bisphosphate nucleotidase CysQ 0.53 LU632_RS23020 glpD glycerol-3-phosphate dehydrogenase
Dickeya dianthicola ME23 0.34 DZA65_RS18320 3'(2'),5'-bisphosphate nucleotidase CysQ 0.53 DZA65_RS20905 glycerol-3-phosphate dehydrogenase low > 75
Escherichia fergusonii Becca 0.34 EFB2_04314 3'(2'),5'-bisphosphate nucleotidase CysQ 0.53 EFB2_00403 Aerobic glycerol-3-phosphate dehydrogenase low > 86
Escherichia coli ECOR27 0.34 NOLOHH_04295 cysQ 3'(2'),5'-bisphosphate nucleotidase CysQ 0.53 NOLOHH_08720 glpD glycerol-3-phosphate dehydrogenase low > 57
Escherichia coli ECOR38 0.34 HEPCGN_10230 cysQ 3'(2'),5'-bisphosphate nucleotidase CysQ 0.53 HEPCGN_15745 glpD glycerol-3-phosphate dehydrogenase low > 85
Escherichia coli HS(pFamp)R (ATCC 700891) 0.34 OHPLBJKB_03819 '3'(2'),5'-bisphosphate nucleotidase CysQ' transl_table=11 0.53 OHPLBJKB_00278 Aerobic glycerol-3-phosphate dehydrogenase low > 73
Escherichia coli Nissle 1917 0.34 ECOLIN_RS24480 3'(2'),5'-bisphosphate nucleotidase CysQ 0.53 ECOLIN_RS19555 glycerol-3-phosphate dehydrogenase low > 52
Escherichia coli ECRC62 0.34 BNILDI_07225 cysQ 3'(2'),5'-bisphosphate nucleotidase CysQ 0.52 BNILDI_02795 glpD glycerol-3-phosphate dehydrogenase
Escherichia coli ECRC102 0.34 NIAGMN_09885 cysQ 3'(2'),5'-bisphosphate nucleotidase CysQ 0.53 NIAGMN_14695 glpD glycerol-3-phosphate dehydrogenase
Escherichia coli ECRC101 0.34 OKFHMN_12035 cysQ 3'(2'),5'-bisphosphate nucleotidase CysQ 0.53 OKFHMN_16925 glpD glycerol-3-phosphate dehydrogenase
Escherichia coli BL21 0.34 ECD_04086 3'(2'),5'-bisphosphate nucleotidase 0.53 ECD_03277 sn-glycerol-3-phosphate dehydrogenase, aerobic, FAD/NAD(P)-binding low > 60
Escherichia coli BW25113 0.34 b4214 cysQ PAPS (adenosine 3'-phosphate 5'-phosphosulfate) 3'(2'),5'-bisphosphate nucleotidase (NCBI) 0.53 b3426 glpD sn-glycerol-3-phosphate dehydrogenase, aerobic, FAD/NAD(P)-binding (NCBI) low > 76
Klebsiella michiganensis M5al 0.34 BWI76_RS02735 3'(2'),5'-bisphosphate nucleotidase CysQ 0.53 BWI76_RS26190 glycerol-3-phosphate dehydrogenase low > 92
Escherichia coli ECRC98 0.34 JDDGAC_15675 cysQ 3'(2'),5'-bisphosphate nucleotidase CysQ 0.53 JDDGAC_20555 glpD glycerol-3-phosphate dehydrogenase
Escherichia coli ECRC101 0.34 MCAODC_02550 cysQ 3'(2'),5'-bisphosphate nucleotidase CysQ 0.53 MCAODC_07455 glpD glycerol-3-phosphate dehydrogenase
Dickeya dianthicola 67-19 0.34 HGI48_RS17235 3'(2'),5'-bisphosphate nucleotidase CysQ 0.53 HGI48_RS19815 glycerol-3-phosphate dehydrogenase low > 71
Escherichia coli ECRC99 0.34 KEDOAH_16120 cysQ 3'(2'),5'-bisphosphate nucleotidase CysQ 0.53 KEDOAH_11215 glpD glycerol-3-phosphate dehydrogenase
Pectobacterium carotovorum WPP14 0.33 HER17_RS03955 3'(2'),5'-bisphosphate nucleotidase CysQ 0.53 HER17_RS01510 glycerol-3-phosphate dehydrogenase
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.33 GFF868 '3'(2'),5'-bisphosphate nucleotidase (EC 3.1.3.7)' transl_table=11 0.51 GFF587 Aerobic glycerol-3-phosphate dehydrogenase (EC 1.1.5.3) 0.33 52
Azospirillum sp. SherDot2 0.33 MPMX19_01084 3'(2'),5'-bisphosphate nucleotidase CysQ 0.49 MPMX19_05967 D-erythritol 1-phosphate dehydrogenase low > 112
Echinicola vietnamensis KMM 6221, DSM 17526 0.31 Echvi_4407 3'(2'),5'-bisphosphate nucleotidase, bacterial 0.17 Echvi_1771 Glycerol-3-phosphate dehydrogenase low > 79
Pontibacter actiniarum KMM 6156, DSM 19842 0.31 CA264_08565 3'(2'),5'-bisphosphate nucleotidase 0.17 CA264_11355 FAD-dependent oxidoreductase low > 74
Pedobacter sp. GW460-11-11-14-LB5 0.31 CA265_RS17065 3'(2'),5'-bisphosphate nucleotidase 0.15 CA265_RS07875 FAD-dependent oxidoreductase low > 88
Dinoroseobacter shibae DFL-12 0.30 Dshi_3574 3'(2'),5'-bisphosphate nucleotidase (RefSeq) 0.43 Dshi_0630 FAD dependent oxidoreductase (RefSeq)
Phaeobacter inhibens DSM 17395 0.30 PGA1_c34500 3'(2'),5'-bisphosphate nucleotidase CysQ 0.40 PGA1_c08240 aerobic glycerol-3-phosphate dehydrogenase GlpD
Rhodospirillum rubrum S1H 0.29 Rru_A0445 3(2),5 -bisphosphate nucleotidase (NCBI) 0.16 Rru_A1508 FAD dependent oxidoreductase (NCBI)
Desulfovibrio vulgaris Miyazaki F 0.29 DvMF_2027 inositol monophosphatase (RefSeq) 0.16 DvMF_0811 FAD dependent oxidoreductase (RefSeq) low > 51
Azospirillum brasilense Sp245 0.29 AZOBR_RS09435 3'-5'-bisphosphate nucleotidase 0.49 AZOBR_RS25870 glycerol-3-phosphate dehydrogenase low > 97
Rhodopseudomonas palustris CGA009 0.29 TX73_008350 3'(2'),5'-bisphosphate nucleotidase CysQ 0.43 TX73_022860 glycerol-3-phosphate dehydrogenase low > 86
Rhizobium sp. OAE497 0.28 ABIE40_RS14720 3'(2'),5'-bisphosphate nucleotidase CysQ 0.45 ABIE40_RS24730 glycerol-3-phosphate dehydrogenase low > 107
Agrobacterium fabrum C58 0.27 Atu2428 exopolysaccharide production protein PssB 0.44 Atu3578 glycerol-3-phosphate dehydrogenase low > 89
Sinorhizobium meliloti 1021 0.27 SMc01952 transmembrane protein 0.49 SMc01620 glycerol-3-phosphate dehydrogenase low > 103
Bosea sp. OAE506 0.21 ABIE41_RS11005 3'(2'),5'-bisphosphate nucleotidase CysQ 0.46 ABIE41_RS14410 glycerol-3-phosphate dehydrogenase low > 77

Not shown: 19 genomes with orthologs for Psest_3960 only; 18 genomes with orthologs for Psest_2775 only