Conservation of cofitness between PS417_27425 and PS417_12805 in Pseudomonas simiae WCS417

55 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_27425 exopolyphosphatase 1.0 PS417_12805 glycogen branching protein 0.38 11
Pseudomonas fluorescens SBW25-INTG 0.99 PFLU_RS29090 exopolyphosphatase 0.98 PFLU_RS13485 1,4-alpha-glucan branching protein GlgB low > 109
Pseudomonas fluorescens SBW25 0.99 PFLU_RS29090 exopolyphosphatase 0.98 PFLU_RS13485 1,4-alpha-glucan branching protein GlgB low > 109
Pseudomonas fluorescens FW300-N2E2 0.94 Pf6N2E2_4454 Exopolyphosphatase (EC 3.6.1.11) 0.86 Pf6N2E2_2117 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) low > 103
Pseudomonas fluorescens FW300-N2C3 0.94 AO356_12900 exopolyphosphatase 0.86 AO356_01245 glycogen branching protein low > 104
Pseudomonas fluorescens FW300-N1B4 0.94 Pf1N1B4_2209 Exopolyphosphatase (EC 3.6.1.11) 0.86 Pf1N1B4_4678 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) low > 87
Pseudomonas sp. RS175 0.94 PFR28_04344 Exopolyphosphatase 0.86 PFR28_01319 1,4-alpha-glucan branching enzyme GlgB low > 88
Pseudomonas fluorescens FW300-N2E3 0.93 AO353_08880 exopolyphosphatase 0.85 AO353_22945 glycogen branching protein low > 101
Pseudomonas fluorescens GW456-L13 0.93 PfGW456L13_875 Exopolyphosphatase (EC 3.6.1.11) 0.85 PfGW456L13_3253 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) low > 87
Pseudomonas syringae pv. syringae B728a ΔmexB 0.89 Psyr_0294 Exopolyphosphatase 0.80 Psyr_2491 glycogen branching enzyme low > 86
Pseudomonas syringae pv. syringae B728a 0.89 Psyr_0294 Exopolyphosphatase 0.80 Psyr_2491 glycogen branching enzyme 0.28 72
Pseudomonas putida KT2440 0.88 PP_5216 exopolyphosphatase 0.76 PP_4058 1,4-alpha-glucan branching enzyme 0.16 62
Pseudomonas sp. S08-1 0.81 OH686_11275 Exopolyphosphatase 0.67 OH686_01540 1,4-alpha-glucan branching enzyme low > 80
Pseudomonas stutzeri RCH2 0.75 Psest_3731 exopolyphosphatase 0.69 Psest_2158 alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase low > 67
Marinobacter adhaerens HP15 0.46 HP15_228 guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase 0.46 HP15_1712 glycogen branching enzyme low > 73
Dickeya dianthicola ME23 0.39 DZA65_RS16050 exopolyphosphatase 0.51 DZA65_RS20930 1,4-alpha-glucan branching protein GlgB low > 75
Xanthomonas campestris pv. campestris strain 8004 0.39 Xcc-8004.4065.1 Exopolyphosphatase (EC 3.6.1.11) 0.56 Xcc-8004.186.1 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) low > 74
Dickeya dianthicola 67-19 0.39 HGI48_RS15230 exopolyphosphatase 0.51 HGI48_RS19855 1,4-alpha-glucan branching protein GlgB low > 71
Dickeya dadantii 3937 0.38 DDA3937_RS15155 exopolyphosphatase 0.50 DDA3937_RS19745 1,4-alpha-glucan branching protein GlgB low > 74
Alteromonas macleodii MIT1002 0.38 MIT1002_00871 Exopolyphosphatase 0.43 MIT1002_02399 1,4-alpha-glucan branching enzyme GlgB — —
Rahnella sp. WP5 0.37 EX31_RS22675 exopolyphosphatase 0.52 EX31_RS05025 1,4-alpha-glucan branching enzyme low > 89
Enterobacter sp. TBS_079 0.37 MPMX20_03357 Exopolyphosphatase 0.51 MPMX20_04314 1,4-alpha-glucan branching enzyme GlgB low > 85
Enterobacter asburiae PDN3 0.37 EX28DRAFT_0165 exopolyphosphatase 0.51 EX28DRAFT_4115 alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.37 GFF2166 Exopolyphosphatase (EC 3.6.1.11) 0.51 GFF575 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) low > 78
Pectobacterium carotovorum WPP14 0.37 HER17_RS06420 exopolyphosphatase 0.52 HER17_RS01485 1,4-alpha-glucan branching enzyme low > 75
Vibrio cholerae E7946 ATCC 55056 0.36 CSW01_03775 exopolyphosphatase 0.45 CSW01_14125 1,4-alpha-glucan branching enzyme low > 62
Klebsiella michiganensis M5al 0.36 BWI76_RS21000 exopolyphosphatase 0.50 BWI76_RS26215 glycogen-branching enzyme low > 92
Escherichia coli ECRC62 0.36 BNILDI_12255 ppx exopolyphosphatase 0.51 BNILDI_02840 glgB 1,4-alpha-glucan branching enzyme — —
Serratia liquefaciens MT49 0.36 IAI46_18920 exopolyphosphatase 0.51 IAI46_23940 1,4-alpha-glucan branching protein GlgB 0.47 19
Escherichia coli ECRC99 0.36 KEDOAH_06425 ppx exopolyphosphatase 0.51 KEDOAH_11255 glgB 1,4-alpha-glucan branching enzyme — —
Escherichia coli ECOR27 0.36 NOLOHH_13445 ppx exopolyphosphatase 0.51 NOLOHH_08675 glgB 1,4-alpha-glucan branching enzyme low > 57
Escherichia coli ECRC101 0.36 OKFHMN_21795 ppx exopolyphosphatase 0.51 OKFHMN_16885 glgB 1,4-alpha-glucan branching enzyme — —
Escherichia coli BL21 0.36 ECD_02394 exopolyphosphatase 0.51 ECD_03284 1,4-alpha-glucan branching enzyme low > 60
Escherichia coli ECRC101 0.36 MCAODC_12325 ppx exopolyphosphatase 0.51 MCAODC_07415 glgB 1,4-alpha-glucan branching enzyme — —
Escherichia coli BW25113 0.36 b2502 ppx exopolyphosphatase (NCBI) 0.51 b3432 glgB glycogen branching enzyme (NCBI) low > 76
Escherichia coli ECRC102 0.36 NIAGMN_19565 ppx exopolyphosphatase 0.51 NIAGMN_14655 glgB 1,4-alpha-glucan branching enzyme — —
Escherichia coli ECRC98 0.36 JDDGAC_25740 ppx exopolyphosphatase 0.51 JDDGAC_20515 glgB 1,4-alpha-glucan branching enzyme — —
Escherichia fergusonii Becca 0.36 EFB2_01396 Exopolyphosphatase 0.51 EFB2_00387 1,4-alpha-glucan branching enzyme GlgB low > 86
Escherichia coli ECOR38 0.36 HEPCGN_20960 ppx exopolyphosphatase 0.51 HEPCGN_15700 glgB 1,4-alpha-glucan branching enzyme low > 85
Escherichia coli HS(pFamp)R (ATCC 700891) 0.36 OHPLBJKB_01224 Exopolyphosphatase 0.51 OHPLBJKB_00269 1,4-alpha-glucan branching enzyme GlgB low > 73
Escherichia coli Nissle 1917 0.36 ECOLIN_RS14205 exopolyphosphatase 0.51 ECOLIN_RS19640 1,4-alpha-glucan branching enzyme low > 52
Ralstonia solanacearum PSI07 0.36 RPSI07_RS15335 exopolyphosphatase 0.58 RPSI07_RS00885 1,4-alpha-glucan branching protein GlgB low > 81
Ralstonia solanacearum GMI1000 0.36 RS_RS07710 exopolyphosphatase 0.57 RS_RS18305 glycogen-branching enzyme low > 80
Ralstonia sp. UNC404CL21Col 0.35 ABZR87_RS14060 exopolyphosphatase 0.59 ABZR87_RS17215 1,4-alpha-glucan branching protein GlgB low > 80
Paraburkholderia sabiae LMG 24235 0.35 QEN71_RS04855 exopolyphosphatase 0.57 QEN71_RS17730 1,4-alpha-glucan branching protein GlgB low > 153
Pantoea sp. MT58 0.35 IAI47_05150 exopolyphosphatase 0.51 IAI47_01680 1,4-alpha-glucan branching enzyme low > 76
Paraburkholderia bryophila 376MFSha3.1 0.35 H281DRAFT_04419 Ppx/GppA phosphatase 0.59 H281DRAFT_06050 1,4-alpha-glucan branching enzyme low > 103
Burkholderia phytofirmans PsJN 0.34 BPHYT_RS14105 exopolyphosphatase 0.59 BPHYT_RS33780 glycogen branching protein low > 109
Shewanella oneidensis MR-1 0.34 SO2185 ppx exopolyphosphatase (NCBI ptt file) 0.49 SO1494 glgB 1,4-alpha-glucan branching enzyme (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.33 Shewana3_2418 Ppx/GppA phosphatase (RefSeq) 0.48 Shewana3_2934 glycogen branching enzyme (RefSeq) low > 73
Shewanella amazonensis SB2B 0.32 Sama_2012 guanosine-5'-triphosphate,3'-diphosphate diphosphatase (RefSeq) 0.50 Sama_2453 1,4-alpha-glucan branching enzyme (RefSeq) low > 62
Shewanella loihica PV-4 0.30 Shew_3078 Ppx/GppA phosphatase (RefSeq) 0.47 Shew_1168 glycogen branching enzyme (RefSeq) low > 60
Variovorax sp. SCN45 0.30 GFF1091 Exopolyphosphatase (EC 3.6.1.11) 0.51 GFF6333 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) low > 127
Variovorax sp. OAS795 0.29 ABID97_RS14590 Ppx/GppA phosphatase family protein 0.52 ABID97_RS04550 1,4-alpha-glucan branching protein GlgB low > 91
Herbaspirillum seropedicae SmR1 0.28 HSERO_RS09440 exopolyphosphatase 0.57 HSERO_RS11650 glycogen branching protein low > 78
Synechococcus elongatus PCC 7942 0.19 Synpcc7942_1965 ppx exopolyphosphatase 0.48 Synpcc7942_1085 glgB glycogen branching enzyme low > 38

Not shown: 16 genomes with orthologs for PS417_27425 only; 17 genomes with orthologs for PS417_12805 only