Conservation of cofitness between PS417_20040 and PS417_12325 in Pseudomonas simiae WCS417

42 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_20040 cobyric acid synthase 1.0 PS417_12325 precorrin-4 C11-methyltransferase 0.45 7
Pseudomonas fluorescens SBW25 0.92 PFLU_RS22005 cobyric acid synthase 0.96 PFLU_RS13015 precorrin-4 C(11)-methyltransferase 0.84 11
Pseudomonas fluorescens SBW25-INTG 0.92 PFLU_RS22005 cobyric acid synthase 0.96 PFLU_RS13015 precorrin-4 C(11)-methyltransferase 0.74 12
Pseudomonas fluorescens FW300-N2E2 0.87 Pf6N2E2_5742 Cobyric acid synthase (EC 6.3.5.10) 0.87 Pf6N2E2_2065 Cobalt-precorrin-4 C11-methyltransferase (EC 2.1.1.133) 0.58 12
Pseudomonas fluorescens FW300-N1B4 0.87 Pf1N1B4_3711 Cobyric acid synthase (EC 6.3.5.10) 0.85 Pf1N1B4_5658 Cobalt-precorrin-4 C11-methyltransferase (EC 2.1.1.133) 0.57 9
Pseudomonas fluorescens GW456-L13 0.87 PfGW456L13_4238 Cobyric acid synthase (EC 6.3.5.10) 0.83 PfGW456L13_2850 Cobalt-precorrin-4 C11-methyltransferase (EC 2.1.1.133) 0.64 2
Pseudomonas syringae pv. syringae B728a 0.87 Psyr_3676 adenosylcobyric acid synthase (glutamine-hydrolysing) 0.83 Psyr_3020 precorrin-4 C11-methyltransferase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.87 Psyr_3676 adenosylcobyric acid synthase (glutamine-hydrolysing) 0.83 Psyr_3020 precorrin-4 C11-methyltransferase low > 86
Pseudomonas fluorescens FW300-N2E3 0.87 AO353_02615 cobyric acid synthase 0.85 AO353_21630 precorrin-4 C11-methyltransferase 0.62 13
Pseudomonas sp. RS175 0.86 PFR28_03204 Cobyric acid synthase 0.84 PFR28_01372 Precorrin-4 C(11)-methyltransferase 0.47 19
Pseudomonas fluorescens FW300-N2C3 0.84 AO356_19160 cobyric acid synthase 0.84 AO356_00530 precorrin-4 C11-methyltransferase 0.57 17
Pseudomonas putida KT2440 0.84 PP_1677 Adenosyl-cobyric acid synthase 0.76 PP_3410 Precorrin-4 C(11)-methyltransferase — —
Pseudomonas sp. S08-1 0.80 OH686_04965 cobyric acid synthase CobQ 0.69 OH686_05035 precorrin-4 C11-methyltransferase low > 80
Ralstonia solanacearum IBSBF1503 0.68 RALBFv3_RS04445 cobyric acid synthase 0.42 RALBFv3_RS20520 precorrin-4 C(11)-methyltransferase 0.31 74
Ralstonia solanacearum UW163 0.68 UW163_RS09225 cobyric acid synthase 0.42 UW163_RS18655 precorrin-4 C(11)-methyltransferase — —
Ralstonia solanacearum GMI1000 0.68 RS_RS12000 cobyric acid synthase 0.42 RS_RS20085 precorrin-4 C(11)-methyltransferase low > 80
Ralstonia solanacearum PSI07 0.67 RPSI07_RS12925 cobyric acid synthase 0.42 RPSI07_RS02220 precorrin-4 C(11)-methyltransferase low > 81
Paraburkholderia sabiae LMG 24235 0.63 QEN71_RS25095 cobyric acid synthase 0.64 QEN71_RS08780 precorrin-4 C(11)-methyltransferase low > 153
Herbaspirillum seropedicae SmR1 0.63 HSERO_RS13230 cobyric acid synthase 0.41 HSERO_RS13280 precorrin-4 C11-methyltransferase 0.60 9
Paraburkholderia bryophila 376MFSha3.1 0.61 H281DRAFT_00146 adenosylcobyric acid synthase (glutamine-hydrolysing) 0.67 H281DRAFT_02858 precorrin-4 C11-methyltransferase /precorrin-2 C20-methyltransferase — —
Dechlorosoma suillum PS 0.61 Dsui_0542 cobyric acid synthase CobQ 0.34 Dsui_2959 precorrin-4 C11-methyltransferase low > 51
Paraburkholderia graminis OAS925 0.61 ABIE53_001255 adenosylcobyric acid synthase 0.66 ABIE53_005936 precorrin-4/cobalt-precorrin-4 C11-methyltransferase 0.90 14
Burkholderia phytofirmans PsJN 0.60 BPHYT_RS04900 cobyric acid synthase 0.66 BPHYT_RS26660 precorrin-4 C11-methyltransferase low > 109
Magnetospirillum magneticum AMB-1 0.44 AMB_RS01485 cobyric acid synthase 0.54 AMB_RS02645 precorrin-4 C(11)-methyltransferase — —
Azospirillum sp. SherDot2 0.44 MPMX19_01025 Cobyric acid synthase 0.48 MPMX19_05565 Precorrin-4 C(11)-methyltransferase — —
Rhodospirillum rubrum S1H 0.44 Rru_A3381 Cobyric acid synthase CobQ (NCBI) 0.53 Rru_A3384 Precorrin-4 C11-methyltransferase region (NCBI) low > 58
Sinorhizobium meliloti 1021 0.42 SMc04309 cobyric acid synthase 0.41 SMc03187 precorrin-4 C(11)-methyltransferase — —
Rhizobium sp. OAE497 0.42 ABIE40_RS11175 cobyric acid synthase 0.42 ABIE40_RS20430 precorrin-4 C(11)-methyltransferase 0.87 58
Phaeobacter inhibens DSM 17395 0.41 PGA1_c24000 cobyric acid synthase CobQ 0.48 PGA1_c08090 precorrin-4 C(11)-methyltransferase CobM — —
Rhodopseudomonas palustris CGA009 0.40 TX73_010800 cobyric acid synthase 0.45 TX73_010740 precorrin-4 C(11)-methyltransferase low > 86
Agrobacterium fabrum C58 0.40 Atu2808 cobyric acid synthase 0.47 Atu2796 precorrin-4 C11-methyltransferase 0.75 5
Fusobacterium nucleatum SB010 0.39 HUW76_05230 cobyric acid synthase 0.47 HUW76_05335 precorrin-4 C(11)-methyltransferase low > 35
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.39 GFF3966 Cobyric acid synthase (EC 6.3.5.10) 0.42 GFF3956 Cobalt-precorrin-4 C11-methyltransferase (EC 2.1.1.133) low > 78
Klebsiella michiganensis M5al 0.39 BWI76_RS23010 cobyric acid synthase CobQ 0.42 BWI76_RS23060 cobalt-precorrin-4 C(11)-methyltransferase low > 92
Synechococcus elongatus PCC 7942 0.38 Synpcc7942_0211 cobQ cobyric acid synthase 0.40 Synpcc7942_1229 cobM precorrin-4 C11-methyltransferase — —
Bosea sp. OAE506 0.38 ABIE41_RS03845 cobyric acid synthase 0.48 ABIE41_RS01830 precorrin-4 C(11)-methyltransferase — —
Dinoroseobacter shibae DFL-12 0.37 Dshi_2096 cobyric acid synthase CobQ (RefSeq) 0.50 Dshi_0176 precorrin-4 C11-methyltransferase (RefSeq) — —
Desulfovibrio vulgaris Hildenborough JW710 0.37 DVU0816 cobQ cobyric acid synthase CobQ (TIGR) 0.32 DVU2748 cobM precorrin-4 C11-methyltransferase (TIGR) 0.95 9
Desulfovibrio vulgaris Miyazaki F 0.36 DvMF_2864 cobyric acid synthase (RefSeq) 0.34 DvMF_1177 precorrin-4 C11-methyltransferase (RefSeq) — —
Mycobacterium tuberculosis H37Rv 0.36 Rv0255c Probable cobyric acid synthase CobQ1 0.42 Rv2071c Precorrin-3 methylase CobM (precorrin-4 C11-methyltransferase) — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.35 GFF3998 Cobyric acid synthase (EC 6.3.5.10) 0.26 GFF4644 Cobalt-precorrin-4 C11-methyltransferase (EC 2.1.1.133) low > 90
Methanococcus maripaludis S2 0.31 MMP_RS06255 cobyric acid synthase CobQ 0.45 MMP_RS08560 precorrin-4 C(11)-methyltransferase — —
Methanococcus maripaludis JJ 0.31 MMJJ_RS08095 cobyric acid synthase CobQ 0.45 MMJJ_RS05810 precorrin-4 C(11)-methyltransferase 0.81 2

Not shown: 21 genomes with orthologs for PS417_20040 only; 0 genomes with orthologs for PS417_12325 only