Conservation of cofitness between GFF2043 and GFF2037 in Hydrogenophaga sp. GW460-11-11-14-LB1

51 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Hydrogenophaga sp. GW460-11-11-14-LB1 1.0 GFF2043 Glycine/D-amino acid oxidase (deaminating) in putrescine utilization cluster 1.0 GFF2037 glutamine synthetase family protein 0.75 7
Paraburkholderia graminis OAS925 0.50 ABIE53_001806 gamma-glutamylputrescine oxidase 0.57 ABIE53_002230 glutamine synthetase low > 113
Burkholderia phytofirmans PsJN 0.48 BPHYT_RS23125 FAD-dependent oxidoreductase 0.57 BPHYT_RS23160 Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11) (from data) low > 109
Paraburkholderia sabiae LMG 24235 0.46 QEN71_RS12970 FAD-binding oxidoreductase 0.59 QEN71_RS12935 glutamine synthetase family protein low > 153
Azospirillum brasilense Sp245 0.42 AZOBR_RS08855 FAD-dependent oxidoreductase 0.52 AZOBR_RS08850 glutamine synthetase low > 97
Azospirillum sp. SherDot2 0.42 MPMX19_04887 Gamma-glutamylputrescine oxidoreductase 0.53 MPMX19_04886 Gamma-glutamylputrescine synthetase PuuA low > 112
Pseudomonas fluorescens GW456-L13 0.41 PfGW456L13_809 Gamma-glutamyl-putrescine oxidase (EC1.4.3.-) 0.53 PfGW456L13_926 glutamine synthetase family protein low > 87
Xanthomonas campestris pv. campestris strain 8004 0.41 Xcc-8004.2201.1 glutamine synthetase family protein 0.56 Xcc-8004.2204.1 glutamine synthetase family protein low > 74
Pseudomonas simiae WCS417 0.41 PS417_27720 FAD-dependent oxidoreductase 0.53 PS417_27135 glutamine synthetase low > 88
Pseudomonas fluorescens SBW25-INTG 0.41 PFLU_RS29395 FAD-binding oxidoreductase 0.53 PFLU_RS28785 glutamine synthetase low > 109
Pseudomonas fluorescens SBW25 0.41 PFLU_RS29395 FAD-binding oxidoreductase 0.53 PFLU_RS28785 glutamine synthetase low > 109
Shewanella amazonensis SB2B 0.40 Sama_2647 oxidoreductase (RefSeq) 0.50 Sama_2644 glutamate--ammonia ligase (RefSeq) low > 62
Klebsiella michiganensis M5al 0.40 BWI76_RS10690 gamma-glutamylputrescine oxidoreductase 0.24 BWI76_RS10710 Glutamate--putrescine ligase (EC 6.3.1.11) (from data) 0.33 3
Pseudomonas syringae pv. syringae B728a 0.40 Psyr_0232 gamma-glutamylputrescine oxidase 0.53 Psyr_4867 L-glutamine synthetase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.40 Psyr_0232 gamma-glutamylputrescine oxidase 0.53 Psyr_4867 L-glutamine synthetase low > 86
Serratia liquefaciens MT49 0.40 IAI46_10540 FAD-binding oxidoreductase 0.24 IAI46_10560 glutamine synthetase low > 86
Enterobacter asburiae PDN3 0.40 EX28DRAFT_1502 Glycine/D-amino acid oxidases (deaminating) 0.23 EX28DRAFT_1498 Glutamine synthetase low > 76
Pseudomonas sp. RS175 0.40 PFR28_04402 Gamma-glutamylputrescine oxidoreductase 0.54 PFR28_04297 Gamma-glutamylputrescine synthetase PuuA low > 88
Shewanella sp. ANA-3 0.39 Shewana3_3093 FAD dependent oxidoreductase (RefSeq) 0.52 Shewana3_3098 L-glutamine synthetase (RefSeq) 0.60 5
Shewanella loihica PV-4 0.39 Shew_0969 FAD dependent oxidoreductase (RefSeq) 0.51 Shew_0972 glutamate--ammonia ligase (RefSeq) low > 60
Pseudomonas stutzeri RCH2 0.39 Psest_3795 Glycine/D-amino acid oxidases (deaminating) 0.53 Psest_4286 Glutamine synthetase 0.27 2
Pseudomonas fluorescens FW300-N2E3 0.39 AO353_09170 FAD-dependent oxidoreductase 0.54 AO353_08590 glutamine synthetase low > 101
Shewanella oneidensis MR-1 0.39 SO1264 hypothetical oxidoreductase (NCBI ptt file) 0.52 SO1268 Glutamate--putrescine ligase (EC 6.3.1.11) (from data) low > 76
Pseudomonas fluorescens FW300-N2E2 0.39 Pf6N2E2_4388 Gamma-glutamyl-putrescine oxidase (EC1.4.3.-) 0.54 Pf6N2E2_4511 glutamine synthetase family protein 0.27 16
Pseudomonas fluorescens FW300-N1B4 0.39 Pf1N1B4_6047 Nucleoside-diphosphate-sugar epimerases 0.52 Pf1N1B4_2256 glutamine synthetase family protein low > 87
Pseudomonas fluorescens FW300-N2C3 0.39 AO356_12605 FAD-dependent oxidoreductase 0.54 AO356_13145 glutamine synthetase low > 104
Escherichia coli HS(pFamp)R (ATCC 700891) 0.38 OHPLBJKB_02381 Gamma-glutamylputrescine oxidoreductase 0.23 OHPLBJKB_02385 Gamma-glutamylputrescine synthetase PuuA low > 73
Escherichia coli ECRC62 0.38 BNILDI_18260 puuB gamma-glutamylputrescine oxidase 0.24 BNILDI_18280 puuA glutamate-putrescine ligase — —
Escherichia coli ECOR38 0.38 HEPCGN_25775 puuB gamma-glutamylputrescine oxidase 0.23 HEPCGN_25755 puuA glutamate-putrescine ligase low > 85
Escherichia coli ECRC102 0.38 NIAGMN_26595 puuB gamma-glutamylputrescine oxidase 0.24 NIAGMN_26615 puuA glutamate-putrescine ligase — —
Escherichia coli ECRC101 0.38 MCAODC_15845 puuB gamma-glutamylputrescine oxidase 0.24 MCAODC_15825 puuA glutamate-putrescine ligase — —
Escherichia coli ECOR27 0.38 NOLOHH_20110 puuB gamma-glutamylputrescine oxidase 0.23 NOLOHH_20130 puuA glutamate-putrescine ligase — —
Escherichia coli BW25113 0.38 b1301 puuB gamma-Glu-putrescine oxidase, FAD/NAD(P)-binding (NCBI) 0.23 b1297 b1297 putative glutamine synthetase (EC 6.3.1.2) (VIMSS) 0.61 1
Escherichia coli ECRC99 0.38 KEDOAH_26350 puuB gamma-glutamylputrescine oxidase 0.24 KEDOAH_26330 puuA glutamate-putrescine ligase — —
Escherichia coli BL21 0.38 ECD_01278 gamma-glutamylputrescine oxidoreductase 0.23 ECD_01274 glutamate--putrescine ligase low > 60
Escherichia coli ECRC101 0.38 OKFHMN_02425 puuB gamma-glutamylputrescine oxidase 0.24 OKFHMN_02445 puuA glutamate-putrescine ligase — —
Escherichia coli ECRC98 0.38 JDDGAC_04970 puuB gamma-glutamylputrescine oxidase 0.24 JDDGAC_04990 puuA glutamate-putrescine ligase — —
Pseudomonas putida KT2440 0.38 PP_3146 putative Oxidoreductase 0.54 PP_3148 putative Glutamine synthetase 0.56 2
Pantoea sp. MT58 0.38 IAI47_07110 FAD-binding oxidoreductase 0.24 IAI47_07125 glutamine synthetase low > 76
Pseudomonas sp. S08-1 0.38 OH686_22830 Gamma-glutamyl-putrescine oxidase 0.53 OH686_11475 glutamine synthetase family protein low > 80
Rahnella sp. WP5 0.37 EX31_RS17910 FAD-binding oxidoreductase 0.23 EX31_RS17895 glutamine synthetase low > 89
Rhodospirillum rubrum S1H 0.37 Rru_A1019 FAD dependent oxidoreductase (NCBI) 0.55 Rru_A2079 Glutamate--ammonia ligase (NCBI) low > 58
Agrobacterium fabrum C58 0.37 Atu0194 oxidoreductase 0.52 Atu0602 glutamine synthetase low > 89
Marinobacter adhaerens HP15 0.34 HP15_944 FAD dependent oxidoreductase 0.25 HP15_942 glutamate-putrescine ligase low > 73
Phaeobacter inhibens DSM 17395 0.33 PGA1_c11510 gamma-glutamylputrescine oxidoreductase PuuB 0.52 PGA1_c11520 gamma-glutamylputrescine synthetase PuuA low > 62
Sinorhizobium meliloti 1021 0.33 SMc01972 oxidoreductase 0.50 SMc00762 glutamine synthetase low > 103
Paraburkholderia bryophila 376MFSha3.1 0.30 H281DRAFT_03219 gamma-glutamylputrescine oxidase 0.57 H281DRAFT_01081 L-glutamine synthetase low > 103
Dinoroseobacter shibae DFL-12 0.30 Dshi_2227 FAD dependent oxidoreductase (RefSeq) 0.50 Dshi_2226 Glutamate--putrescine ligase (RefSeq) low > 64
Rhizobium sp. OAE497 0.29 ABIE40_RS03205 FAD-binding oxidoreductase 0.51 ABIE40_RS03210 glutamine synthetase family protein 0.60 100
Caulobacter crescentus NA1000 Δfur 0.25 CCNA_03229 FAD dependent oxidoreductase 0.52 CCNA_03230 glutamine synthetase low > 67
Caulobacter crescentus NA1000 0.25 CCNA_03229 FAD dependent oxidoreductase 0.52 CCNA_03230 glutamine synthetase low > 66
Acinetobacter radioresistens SK82 0.23 MPMX26_02004 Gamma-glutamylputrescine oxidoreductase 0.22 MPMX26_02239 Gamma-glutamylputrescine synthetase PuuA — —

Not shown: 26 genomes with orthologs for GFF2043 only; 2 genomes with orthologs for GFF2037 only