Conservation of cofitness between Psest_3476 and Psest_1844 in Pseudomonas stutzeri RCH2

46 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_3476 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 1.0 Psest_1844 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) 0.19 5
Pseudomonas sp. RS175 0.74 PFR28_02328 Transcriptional regulatory protein QseB 0.72 PFR28_01106 Soluble lytic murein transglycosylase low > 88
Pseudomonas sp. S08-1 0.74 OH686_04665 Two-component system response regulator QseB 0.74 OH686_21900 Soluble lytic murein transglycosylase low > 80
Pseudomonas fluorescens FW300-N2C3 0.73 AO356_23845 XRE family transcriptional regulator 0.72 AO356_02350 lytic transglycosylase low > 104
Pseudomonas fluorescens SBW25-INTG 0.72 PFLU_RS15245 response regulator 0.70 PFLU_RS07630 transglycosylase SLT domain-containing protein low > 109
Pseudomonas fluorescens SBW25 0.72 PFLU_RS15245 response regulator 0.70 PFLU_RS07630 transglycosylase SLT domain-containing protein low > 109
Pseudomonas fluorescens FW300-N2E2 0.72 Pf6N2E2_1539 Two-component system response regulator QseB 0.72 Pf6N2E2_2294 Soluble lytic murein transglycosylase precursor (EC 3.2.1.-) low > 103
Pseudomonas simiae WCS417 0.72 PS417_13595 XRE family transcriptional regulator 0.70 PS417_07550 lytic transglycosylase low > 88
Pseudomonas fluorescens FW300-N1B4 0.72 Pf1N1B4_4454 Two-component system response regulator QseB 0.70 Pf1N1B4_3898 Soluble lytic murein transglycosylase precursor (EC 3.2.1.-) — —
Pseudomonas fluorescens GW456-L13 0.71 PfGW456L13_3169 Two-component system response regulator QseB 0.71 PfGW456L13_4045 Soluble lytic murein transglycosylase precursor (EC 3.2.1.-) low > 87
Pseudomonas putida KT2440 0.70 PP_2713 DNA-binding response regulator 0.71 PP_2130 putative Soluble lytic transglycosylase low > 96
Pseudomonas syringae pv. syringae B728a 0.62 Psyr_3511 Response regulator receiver:Transcriptional regulatory protein, C-terminal 0.69 Psyr_3295 SLT low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.62 Psyr_3511 Response regulator receiver:Transcriptional regulatory protein, C-terminal 0.69 Psyr_3295 SLT low > 86
Paraburkholderia graminis OAS925 0.59 ABIE53_003418 two-component system response regulator QseB 0.17 ABIE53_000044 soluble lytic murein transglycosylase 0.37 17
Burkholderia phytofirmans PsJN 0.58 BPHYT_RS16220 transcriptional regulator 0.17 BPHYT_RS18610 lytic transglycosylase — —
Paraburkholderia bryophila 376MFSha3.1 0.58 H281DRAFT_04180 two component transcriptional regulator, winged helix family 0.17 H281DRAFT_05816 soluble lytic murein transglycosylase low > 103
Herbaspirillum seropedicae SmR1 0.57 HSERO_RS21985 transcriptional regulator 0.16 HSERO_RS21415 lytic transglycosylase low > 78
Paraburkholderia sabiae LMG 24235 0.56 QEN71_RS02475 response regulator 0.17 QEN71_RS28635 lytic transglycosylase domain-containing protein low > 153
Cupriavidus basilensis FW507-4G11 0.54 RR42_RS37390 XRE family transcriptional regulator 0.15 RR42_RS01405 lytic transglycosylase low > 128
Dechlorosoma suillum PS 0.54 Dsui_2248 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain 0.18 Dsui_0683 soluble lytic murein transglycosylase-like protein low > 51
Hydrogenophaga sp. GW460-11-11-14-LB1 0.54 GFF700 Two-component system response regulator QseB 0.18 GFF1614 Soluble lytic murein transglycosylase precursor (EC 3.2.1.-) 0.49 78
Variovorax sp. SCN45 0.54 GFF1175 Two-component system response regulator QseB 0.17 GFF5163 Soluble lytic murein transglycosylase (EC 4.2.2.n1) low > 127
Variovorax sp. OAS795 0.53 ABID97_RS14955 response regulator 0.18 ABID97_RS06595 transglycosylase SLT domain-containing protein low > 91
Ralstonia sp. UNC404CL21Col 0.53 ABZR87_RS22890 response regulator transcription factor 0.15 ABZR87_RS04885 lytic transglycosylase domain-containing protein low > 80
Acidovorax sp. GW101-3H11 0.53 Ac3H11_3946 Two-component system response regulator QseB 0.18 Ac3H11_1834 Soluble lytic murein transglycosylase precursor (EC 3.2.1.-) low > 79
Ralstonia solanacearum GMI1000 0.52 RS_RS24590 DNA-binding response regulator 0.16 RS_RS00445 lytic transglycosylase low > 80
Ralstonia solanacearum UW163 0.51 UW163_RS17155 DNA-binding response regulator 0.16 UW163_RS03720 lytic transglycosylase — —
Ralstonia solanacearum IBSBF1503 0.51 RALBFv3_RS16415 DNA-binding response regulator 0.16 RALBFv3_RS09860 lytic transglycosylase low > 76
Ralstonia solanacearum PSI07 0.50 RPSI07_RS07290 DNA-binding response regulator 0.15 RPSI07_RS23510 lytic transglycosylase low > 81
Dickeya dianthicola 67-19 0.50 HGI48_RS21345 response regulator 0.22 HGI48_RS18385 murein transglycosylase low > 71
Dickeya dianthicola ME23 0.49 DZA65_RS22325 response regulator 0.22 DZA65_RS19525 murein transglycosylase low > 75
Pseudomonas fluorescens FW300-N2E3 0.49 AO353_23010 XRE family transcriptional regulator 0.69 AO353_00530 lytic transglycosylase low > 101
Pantoea sp. MT58 0.49 IAI47_00340 response regulator 0.23 IAI47_16260 murein transglycosylase low > 76
Alteromonas macleodii MIT1002 0.48 MIT1002_00810 Transcriptional regulatory protein BasR 0.23 MIT1002_00576 Soluble lytic murein transglycosylase precursor low > 70
Acinetobacter radioresistens SK82 0.47 MPMX26_02034 Transcriptional regulatory protein QseB 0.13 MPMX26_02666 Soluble lytic murein transglycosylase — —
Vibrio cholerae E7946 ATCC 55056 0.47 CSW01_19595 DNA-binding response regulator 0.21 CSW01_03655 murein transglycosylase low > 62
Escherichia coli HS(pFamp)R (ATCC 700891) 0.47 OHPLBJKB_00677 Transcriptional regulatory protein QseB 0.23 OHPLBJKB_03669 Soluble lytic murein transglycosylase low > 73
Rhodanobacter denitrificans FW104-10B01 0.46 LRK54_RS14145 response regulator transcription factor 0.22 LRK54_RS07245 transglycosylase SLT domain-containing protein low > 59
Rhodanobacter denitrificans MT42 0.46 LRK55_RS13865 response regulator transcription factor 0.22 LRK55_RS06980 transglycosylase SLT domain-containing protein low > 63
Lysobacter sp. OAE881 0.45 ABIE51_RS00875 response regulator transcription factor 0.17 ABIE51_RS19070 transglycosylase SLT domain-containing protein low > 62
Pectobacterium carotovorum WPP14 0.45 HER17_RS21560 response regulator 0.23 HER17_RS02750 murein transglycosylase low > 75
Shewanella oneidensis MR-1 0.45 SO2104 DNA-binding response regulator YgiX, putative (NCBI ptt file) 0.25 SO2040 soluble lytic murein transglycosylase, putative (NCBI ptt file) low > 76
Serratia liquefaciens MT49 0.45 IAI46_21235 response regulator 0.24 IAI46_02985 murein transglycosylase low > 86
Dyella japonica UNC79MFTsu3.2 0.44 ABZR86_RS01270 response regulator 0.22 ABZR86_RS12745 transglycosylase SLT domain-containing protein low > 74
Shewanella sp. ANA-3 0.44 Shewana3_1885 two component transcriptional regulator (RefSeq) 0.26 Shewana3_2236 lytic transglycosylase, catalytic (RefSeq) low > 73
Dickeya dadantii 3937 0.43 DDA3937_RS19350 two-component system response regulator PmrA 0.23 DDA3937_RS18455 murein transglycosylase low > 74
Rhodanobacter sp. FW510-T8 0.43 OKGIIK_14050 ompR DNA-binding response regulator 0.21 OKGIIK_16395 Lytic transglycosylase low > 52

Not shown: 9 genomes with orthologs for Psest_3476 only; 22 genomes with orthologs for Psest_1844 only