Conservation of cofitness between PGA1_c29000 and PGA1_c18160 in Phaeobacter inhibens DSM 17395

56 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Phaeobacter inhibens DSM 17395 1.0 PGA1_c29000 inner membrane lipoprotein 1.0 PGA1_c18160 trigger factor Tig 0.40 2
Dinoroseobacter shibae DFL-12 0.36 Dshi_3025 OmpA/MotB domain protein (RefSeq) 0.82 Dshi_2190 trigger factor (RefSeq) low > 64
Escherichia coli BL21 0.34 ECD_03402 multicopy suppressor of bamB; outer membrane lipoprotein 0.24 ECD_00387 peptidyl-prolyl cis/trans isomerase (trigger factor) low > 60
Sphingomonas koreensis DSMZ 15582 0.33 Ga0059261_1444 Outer membrane protein and related peptidoglycan-associated (lipo)proteins 0.41 Ga0059261_0089 trigger factor 0.77 45
Xanthomonas campestris pv. campestris strain 8004 0.33 Xcc-8004.3483.1 Outer membrane protein A precursor 0.16 Xcc-8004.4049.1 Cell division trigger factor (EC 5.2.1.8) low > 74
Enterobacter asburiae PDN3 0.33 EX28DRAFT_3812 Outer membrane protein and related peptidoglycan-associated (lipo)proteins 0.24 EX28DRAFT_2535 trigger factor low > 76
Klebsiella michiganensis M5al 0.33 BWI76_RS26935 OmpA family lipoprotein 0.24 BWI76_RS06520 trigger factor low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.33 GFF459 Outer membrane protein A precursor 0.24 GFF4352 Cell division trigger factor (EC 5.2.1.8) low > 78
Enterobacter sp. TBS_079 0.32 MPMX20_00182 putative lipoprotein YiaD 0.24 MPMX20_01027 Trigger factor low > 85
Escherichia fergusonii Becca 0.32 EFB2_00255 putative lipoprotein YiaD 0.23 EFB2_03621 Trigger factor 0.46 34
Escherichia coli Nissle 1917 0.32 ECOLIN_RS20325 OmpA family lipoprotein 0.24 ECOLIN_RS02620 trigger factor low > 52
Escherichia coli ECRC101 0.32 MCAODC_06540 yiaD OmpA family lipoprotein 0.24 MCAODC_27565 tig trigger factor — —
Escherichia coli ECRC102 0.32 NIAGMN_13785 yiaD OmpA family lipoprotein 0.24 NIAGMN_06395 tig trigger factor — —
Escherichia coli ECOR27 0.32 NOLOHH_07970 yiaD OmpA family lipoprotein 0.24 NOLOHH_01275 tig trigger factor low > 57
Escherichia coli ECRC62 0.32 BNILDI_03575 yiaD OmpA family lipoprotein 0.23 BNILDI_22690 tig trigger factor — —
Escherichia coli ECRC99 0.32 KEDOAH_12125 yiaD OmpA family lipoprotein 0.24 KEDOAH_19625 tig trigger factor — —
Escherichia coli ECRC101 0.32 OKFHMN_16025 yiaD OmpA family lipoprotein 0.24 OKFHMN_08340 tig trigger factor — —
Escherichia coli ECOR38 0.32 HEPCGN_14915 yiaD OmpA family lipoprotein 0.24 HEPCGN_06955 tig trigger factor low > 85
Escherichia coli HS(pFamp)R (ATCC 700891) 0.32 OHPLBJKB_00154 putative lipoprotein YiaD 0.24 OHPLBJKB_03237 Trigger factor low > 73
Escherichia coli ECRC98 0.32 JDDGAC_19655 yiaD OmpA family lipoprotein 0.24 JDDGAC_11995 tig trigger factor — —
Escherichia coli BW25113 0.32 b3552 yiaD predicted outer membrane lipoprotien (NCBI) 0.24 b0436 tig trigger factor (NCBI) low > 76
Caulobacter crescentus NA1000 0.32 CCNA_00201 outer membrane protein 0.39 CCNA_02042 trigger factor chaperone low > 66
Caulobacter crescentus NA1000 Δfur 0.32 CCNA_00201 outer membrane protein 0.39 CCNA_02042 trigger factor chaperone low > 67
Kangiella aquimarina DSM 16071 0.31 B158DRAFT_2386 Outer membrane protein and related peptidoglycan-associated (lipo)proteins 0.24 B158DRAFT_1033 trigger factor low > 40
Sinorhizobium meliloti 1021 0.31 SMc00354 hypothetical protein 0.41 SMc02050 trigger factor — —
Shewanella oneidensis MR-1 0.31 SO3969 OmpA family protein (NCBI ptt file) 0.21 SO1793 tig trigger factor (NCBI ptt file) low > 76
Alteromonas macleodii MIT1002 0.31 MIT1002_04106 Inner membrane lipoprotein YiaD precursor 0.25 MIT1002_02761 Trigger factor low > 70
Fusobacterium nucleatum SB010 0.30 HUW76_03925 OmpA family protein 0.18 HUW76_01050 trigger factor low > 35
Shewanella amazonensis SB2B 0.30 Sama_3096 OmpA family protein (RefSeq) 0.24 Sama_1223 tig trigger factor (RefSeq) 0.23 42
Shewanella sp. ANA-3 0.29 Shewana3_0665 OmpA/MotB domain-containing protein (RefSeq) 0.22 Shewana3_2662 tig trigger factor (RefSeq) low > 73
Pseudomonas sp. S08-1 0.29 OH686_06290 Outer membrane porin, OmpA family 0.25 OH686_03650 trigger factor low > 80
Rhizobium sp. OAE497 0.29 ABIE40_RS11645 OmpA family protein 0.39 ABIE40_RS08600 trigger factor low > 107
Shewanella loihica PV-4 0.29 Shew_0908 OmpA/MotB domain-containing protein (RefSeq) 0.24 Shew_2509 tig trigger factor (RefSeq) low > 60
Marinobacter adhaerens HP15 0.29 HP15_2555 OmpA/MotB domain protein 0.25 HP15_2186 trigger factor low > 73
Pantoea sp. MT58 0.29 IAI47_00140 OmpA family lipoprotein 0.24 IAI47_14660 trigger factor low > 76
Agrobacterium fabrum C58 0.29 Atu2722 porin 0.36 Atu1664 trigger factor — —
Brevundimonas sp. GW460-12-10-14-LB2 0.29 A4249_RS13240 OmpA family protein 0.40 A4249_RS06500 trigger factor — —
Pseudomonas stutzeri RCH2 0.28 Psest_3218 Outer membrane protein and related peptidoglycan-associated (lipo)proteins 0.24 Psest_2288 trigger factor low > 67
Serratia liquefaciens MT49 0.27 IAI46_00110 OmpA family lipoprotein 0.24 IAI46_05005 trigger factor low > 86
Rahnella sp. WP5 0.27 EX31_RS05890 OmpA family lipoprotein 0.25 EX31_RS22240 trigger factor low > 89
Pseudomonas sp. RS175 0.27 PFR28_00255 putative lipoprotein YiaD 0.23 PFR28_01227 Trigger factor low > 88
Pseudomonas syringae pv. syringae B728a ΔmexB 0.26 Psyr_1005 OmpA/MotB 0.24 Psyr_1746 Trigger factor low > 86
Pseudomonas syringae pv. syringae B728a 0.26 Psyr_1005 OmpA/MotB 0.24 Psyr_1746 Trigger factor 0.29 67
Pseudomonas fluorescens FW300-N2C3 0.26 AO356_17015 cell envelope biogenesis protein OmpA 0.24 AO356_01755 trigger factor low > 104
Pseudomonas fluorescens FW300-N2E2 0.26 Pf6N2E2_5327 Outer membrane protein assembly factor YaeT precursor 0.24 Pf6N2E2_2219 Cell division trigger factor (EC 5.2.1.8) low > 103
Ralstonia sp. UNC404CL21Col 0.25 ABZR87_RS16255 OmpA family protein 0.21 ABZR87_RS12800 trigger factor low > 80
Cupriavidus basilensis FW507-4G11 0.25 RR42_RS16015 membrane protein 0.21 RR42_RS09015 trigger factor low > 128
Ralstonia solanacearum GMI1000 0.25 RS_RS11950 OmpA family lipoprotein 0.20 RS_RS08640 trigger factor low > 80
Ralstonia solanacearum IBSBF1503 0.25 RALBFv3_RS04400 OmpA family protein 0.21 RALBFv3_RS01355 trigger factor — —
Ralstonia solanacearum UW163 0.25 UW163_RS09270 OmpA family protein 0.21 UW163_RS14665 trigger factor — —
Ralstonia solanacearum PSI07 0.24 RPSI07_RS12970 OmpA family protein 0.21 RPSI07_RS16120 trigger factor low > 81
Pontibacter actiniarum KMM 6156, DSM 19842 0.24 CA264_14420 hypothetical protein 0.09 CA264_01415 trigger factor low > 74
Herbaspirillum seropedicae SmR1 0.24 HSERO_RS21940 membrane protein 0.22 HSERO_RS12920 trigger factor low > 78
Acinetobacter radioresistens SK82 0.23 MPMX26_02417 putative lipoprotein YiaD 0.22 MPMX26_00407 Trigger factor low > 36
Paraburkholderia sabiae LMG 24235 0.22 QEN71_RS25020 OmpA family protein 0.22 QEN71_RS21990 trigger factor low > 153
Hydrogenophaga sp. GW460-11-11-14-LB1 0.22 GFF286 Outer membrane lipoprotein omp16 precursor 0.20 GFF4040 Cell division trigger factor (EC 5.2.1.8) — —
Variovorax sp. SCN45 0.20 GFF5449 Probable lipoprotein YiaD 0.22 GFF490 Cell division trigger factor (EC 5.2.1.8) low > 127

Not shown: 6 genomes with orthologs for PGA1_c29000 only; 36 genomes with orthologs for PGA1_c18160 only