Conservation of cofitness between GFF362 and GFF1466 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

58 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 1.0 GFF362 Putative inner membrane protein 1.0 GFF1466 Alkylphosphonate utilization operon protein PhnA 0.60 15
Enterobacter asburiae PDN3 0.94 EX28DRAFT_3895 Predicted membrane protein 0.95 EX28DRAFT_4198 alkylphosphonate utilization operon protein PhnA low > 76
Klebsiella michiganensis M5al 0.91 BWI76_RS27405 membrane protein 0.93 BWI76_RS02240 alkylphosphonate utilization operon protein PhnA low > 92
Escherichia coli ECRC99 0.89 KEDOAH_12570 yicG UPF0126 inner membrane protein YicG 0.98 KEDOAH_15560 yjdM Protein YjdM — —
Escherichia coli BL21 0.89 ECD_03503 UPF0126 family inner membrane protein 0.98 ECD_03979 zinc-ribbon family protein low > 60
Escherichia coli BW25113 0.89 b3646 yicG orf, hypothetical protein (VIMSS) 0.98 b4108 phnA hypothetical protein (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.89 OHPLBJKB_00055 hypothetical protein 0.98 OHPLBJKB_03937 hypothetical protein low > 73
Escherichia coli ECOR27 0.89 NOLOHH_07455 yicG UPF0126 inner membrane protein YicG 0.98 NOLOHH_04870 yjdM Protein YjdM low > 57
Escherichia fergusonii Becca 0.89 EFB2_00142 hypothetical protein 0.98 EFB2_04475 hypothetical protein low > 86
Escherichia coli ECRC62 0.89 BNILDI_04060 yicG UPF0126 inner membrane protein YicG 0.98 BNILDI_06620 yjdM Protein YjdM — —
Escherichia coli ECRC101 0.89 MCAODC_06085 yicG UPF0126 inner membrane protein YicG 0.98 MCAODC_03115 yjdM Protein YjdM — —
Escherichia coli ECRC101 0.89 OKFHMN_15575 yicG UPF0126 inner membrane protein YicG 0.98 OKFHMN_12605 yjdM Protein YjdM — —
Escherichia coli ECOR38 0.89 HEPCGN_14395 yicG UPF0126 inner membrane protein YicG 0.98 HEPCGN_11240 yjdM Protein YjdM low > 85
Escherichia coli Nissle 1917 0.89 ECOLIN_RS20770 trimeric intracellular cation channel family protein 0.98 ECOLIN_RS23775 zinc ribbon domain-containing protein YjdM low > 52
Escherichia coli ECRC98 0.89 JDDGAC_19200 yicG UPF0126 inner membrane protein YicG 0.98 JDDGAC_16240 yjdM Protein YjdM — —
Escherichia coli ECRC102 0.89 NIAGMN_13335 yicG UPF0126 inner membrane protein YicG 0.98 NIAGMN_10450 yjdM Protein YjdM — —
Enterobacter sp. TBS_079 0.85 MPMX20_00090 hypothetical protein 0.95 MPMX20_00327 hypothetical protein low > 85
Pantoea sp. MT58 0.75 IAI47_00530 trimeric intracellular cation channel family protein 0.72 IAI47_04280 alkylphosphonate utilization protein low > 76
Serratia liquefaciens MT49 0.71 IAI46_24875 trimeric intracellular cation channel family protein 0.91 IAI46_06020 phnA family protein low > 86
Rahnella sp. WP5 0.71 EX31_RS15790 trimeric intracellular cation channel family protein 0.73 EX31_RS19010 alkylphosphonate utilization protein low > 89
Pseudomonas putida KT2440 0.60 PP_4901 conserved inner membrane protein 0.70 PP_0686 conserved protein of unknown function low > 96
Pseudomonas fluorescens SBW25-INTG 0.58 PFLU_RS02535 trimeric intracellular cation channel family protein 0.70 PFLU_RS25385 alkylphosphonate utilization protein low > 109
Pseudomonas fluorescens SBW25 0.58 PFLU_RS02535 trimeric intracellular cation channel family protein 0.70 PFLU_RS25385 alkylphosphonate utilization protein low > 109
Pseudomonas simiae WCS417 0.58 PS417_02455 putative transporter, required for glycine utilization (from data) 0.71 PS417_23570 hypothetical protein low > 88
Acinetobacter radioresistens SK82 0.57 MPMX26_00138 hypothetical protein 0.68 MPMX26_00660 hypothetical protein low > 36
Pseudomonas syringae pv. syringae B728a ΔmexB 0.56 Psyr_0565 Protein of unknown function UPF0126 0.73 Psyr_0863 PhnA protein low > 86
Pseudomonas syringae pv. syringae B728a 0.56 Psyr_0565 Protein of unknown function UPF0126 0.73 Psyr_0863 PhnA protein low > 86
Pseudomonas fluorescens FW300-N2E3 0.55 AO353_13110 putative transporter, required for glycine utilization (from data) 0.70 AO353_14090 alkylphosphonate utilization protein low > 101
Pseudomonas sp. RS175 0.55 PFR28_05114 hypothetical protein 0.67 PFR28_03774 hypothetical protein low > 88
Pseudomonas fluorescens FW300-N2C3 0.55 AO356_08690 hypothetical protein 0.69 AO356_15790 alkylphosphonate utilization protein low > 104
Pseudomonas fluorescens FW300-N1B4 0.55 Pf1N1B4_1419 putative membrane protein 0.70 Pf1N1B4_2795 Alkylphosphonate utilization operon protein PhnA low > 87
Pseudomonas fluorescens FW300-N2E2 0.55 Pf6N2E2_3621 putative transporter, required for glycine utilization (from data) 0.70 Pf6N2E2_5098 Alkylphosphonate utilization operon protein PhnA low > 103
Pseudomonas fluorescens GW456-L13 0.54 PfGW456L13_161 putative transporter, required for glycine utilization (from data) 0.70 PfGW456L13_1467 Alkylphosphonate utilization operon protein PhnA low > 87
Dickeya dianthicola 67-19 0.52 HGI48_RS10325 trimeric intracellular cation channel family protein 0.74 HGI48_RS05390 alkylphosphonate utilization protein low > 71
Dechlorosoma suillum PS 0.51 Dsui_0014 putative membrane protein 0.46 Dsui_0559 alkylphosphonate utilization operon protein PhnA low > 51
Dickeya dianthicola ME23 0.51 DZA65_RS10800 trimeric intracellular cation channel family protein 0.74 DZA65_RS05690 alkylphosphonate utilization protein — —
Shewanella loihica PV-4 0.51 Shew_1154 hypothetical protein (RefSeq) 0.62 Shew_1931 alkylphosphonate utilization operon protein PhnA (RefSeq) low > 60
Dickeya dadantii 3937 0.51 DDA3937_RS10315 trimeric intracellular cation channel family protein 0.73 DDA3937_RS05305 alkylphosphonate utilization protein low > 74
Pectobacterium carotovorum WPP14 0.50 HER17_RS11080 trimeric intracellular cation channel family protein 0.75 HER17_RS16190 alkylphosphonate utilization protein low > 75
Pseudomonas stutzeri RCH2 0.48 Psest_1636 putative transporter, required for glycine utilization (from data) 0.67 Psest_0770 alkylphosphonate utilization operon protein PhnA low > 67
Herbaspirillum seropedicae SmR1 0.46 HSERO_RS02545 membrane protein 0.63 HSERO_RS13640 hypothetical protein low > 78
Marinobacter adhaerens HP15 0.35 HP15_2547 membrane protein containing uncharacterized protein family UPF0126 domains 0.69 HP15_843 PhnA protein low > 73
Pontibacter actiniarum KMM 6156, DSM 19842 0.33 CA264_06085 hypothetical protein 0.58 CA264_00900 phosphonoacetate hydrolase low > 74
Echinicola vietnamensis KMM 6221, DSM 17526 0.33 Echvi_1200 Predicted membrane protein 0.57 Echvi_3330 alkylphosphonate utilization operon protein PhnA low > 79
Ralstonia solanacearum GMI1000 0.30 RS_RS11765 trimeric intracellular cation channel family protein 0.68 RS_RS23785 hypothetical protein low > 80
Ralstonia solanacearum PSI07 0.30 RPSI07_RS13175 trimeric intracellular cation channel family protein 0.68 RPSI07_RS06075 hypothetical protein low > 81
Ralstonia sp. UNC404CL21Col 0.30 ABZR87_RS16075 trimeric intracellular cation channel family protein 0.58 ABZR87_RS12375 zinc ribbon domain-containing protein YjdM low > 80
Cupriavidus basilensis FW507-4G11 0.30 RR42_RS04305 membrane protein 0.53 RR42_RS12350 alkylphosphonate utilization protein low > 128
Paraburkholderia bryophila 376MFSha3.1 0.29 H281DRAFT_00171 Uncharacterized membrane protein YeiH 0.51 H281DRAFT_05381 phosphonoacetate hydrolase low > 103
Burkholderia phytofirmans PsJN 0.28 BPHYT_RS05060 membrane protein 0.57 BPHYT_RS24510 alkylphosphonate utilization protein low > 109
Ralstonia solanacearum UW163 0.28 UW163_RS09495 trimeric intracellular cation channel family protein 0.66 UW163_RS21605 alkylphosphonate utilization protein — —
Ralstonia solanacearum IBSBF1503 0.28 RALBFv3_RS04175 trimeric intracellular cation channel family protein 0.66 RALBFv3_RS17545 alkylphosphonate utilization protein low > 76
Agrobacterium fabrum C58 0.26 Atu0154 hypothetical protein 0.35 Atu6108 alkylphosphonate uptake protein low > 89
Xanthomonas campestris pv. campestris strain 8004 0.25 Xcc-8004.4770.1 FIG01211391: hypothetical protein 0.44 Xcc-8004.3628.1 Alkylphosphonate utilization operon protein PhnA low > 74
Acidovorax sp. GW101-3H11 0.25 Ac3H11_3909 Putative membrane protein 0.50 Ac3H11_4421 Alkylphosphonate utilization operon protein PhnA — —
Rhodanobacter sp. FW510-T8 0.24 OKGIIK_06540 Trimeric intracellular cation channel family protein 0.40 OKGIIK_04380 Phosphonoacetate hydrolase low > 52
Bosea sp. OAE506 0.24 ABIE41_RS00215 trimeric intracellular cation channel family protein 0.36 ABIE41_RS12485 alkylphosphonate utilization protein — —
Azospirillum sp. SherDot2 0.23 MPMX19_04399 hypothetical protein 0.56 MPMX19_01079 hypothetical protein low > 112
Dyella japonica UNC79MFTsu3.2 0.22 ABZR86_RS05500 trimeric intracellular cation channel family protein 0.44 ABZR86_RS00195 zinc ribbon domain-containing protein YjdM low > 74

Not shown: 10 genomes with orthologs for GFF362 only; 12 genomes with orthologs for GFF1466 only