| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 1.0 | GFF695 | | Cytochrome oxidase biogenesis protein Surf1, facilitates heme A insertion | 1.0 | GFF121 | | Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) | 0.86 | 3 |
| Variovorax sp. OAS795 | 0.45 | ABID97_RS23930 | | SURF1 family protein | 0.67 | ABID97_RS08250 | | RluA family pseudouridine synthase | low | > 91 |
| Variovorax sp. SCN45 | 0.45 | GFF2304 | | Cytochrome oxidase biogenesis protein Surf1, facilitates heme A insertion | 0.67 | GFF3847 | | LSU rRNA pseudouridine(955/2504/2580) synthase (EC 5.4.99.24) | low | > 127 |
| Acidovorax sp. GW101-3H11 | 0.44 | Ac3H11_3886 | | Cytochrome oxidase biogenesis protein Surf1, facilitates heme A insertion | 0.69 | Ac3H11_1590 | | Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) | low | > 79 |
| Ralstonia sp. UNC404CL21Col | 0.32 | ABZR87_RS06830 | | SURF1 family protein | 0.51 | ABZR87_RS10090 | | RluA family pseudouridine synthase | low | > 80 |
| Paraburkholderia sabiae LMG 24235 | 0.30 | QEN71_RS01530 | | SURF1 family protein | 0.53 | QEN71_RS04500 | | RluA family pseudouridine synthase | low | > 153 |
| Herbaspirillum seropedicae SmR1 | 0.30 | HSERO_RS20760 | | hypothetical protein | 0.51 | HSERO_RS09415 | | ribosomal large subunit pseudouridine synthase C | low | > 78 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.30 | H281DRAFT_01988 | | Cytochrome oxidase assembly protein ShyY1 | 0.54 | H281DRAFT_04340 | | 23S rRNA pseudouridine955/2504/2580 synthase | low | > 103 |
| Ralstonia solanacearum GMI1000 | 0.30 | RS_RS01815 | | SURF1 family protein | 0.49 | RS_RS05155 | | RluA family pseudouridine synthase | low | > 80 |
| Ralstonia solanacearum PSI07 | 0.29 | RPSI07_RS22330 | | SURF1 family protein | 0.48 | RPSI07_RS19085 | | RluA family pseudouridine synthase | low | > 81 |
| Ralstonia solanacearum UW163 | 0.29 | UW163_RS02605 | | SURF1 family protein | 0.50 | UW163_RS11840 | | RluA family pseudouridine synthase | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.29 | RALBFv3_RS10975 | | SURF1 family protein | 0.50 | RALBFv3_RS14375 | | RluA family pseudouridine synthase | low | > 76 |
| Burkholderia phytofirmans PsJN | 0.29 | BPHYT_RS02675 | | hypothetical protein | 0.54 | BPHYT_RS14480 | | ribosomal large subunit pseudouridine synthase C | low | > 109 |
| Paraburkholderia graminis OAS925 | 0.29 | ABIE53_000680 | | surfeit locus 1 family protein | 0.54 | ABIE53_003058 | | 23S rRNA pseudouridine955/2504/2580 synthase | low | > 113 |
| Cupriavidus basilensis FW507-4G11 | 0.26 | RR42_RS01905 | | cytochrome C oxidase subunit II | 0.49 | RR42_RS14155 | | pseudouridine synthase | low | > 128 |
| Shewanella loihica PV-4 | 0.20 | Shew_0120 | | hypothetical protein (RefSeq) | 0.44 | Shew_1594 | | RluA family pseudouridine synthase (RefSeq) | low | > 60 |
| Pseudomonas putida KT2440 | 0.19 | PP_0107 | | conserved protein of unknown function | 0.40 | PP_1906 | | ribosomal large subunit pseudouridine synthase C | 0.16 | 12 |
| Pseudomonas sp. S08-1 | 0.17 | OH686_12300 | | Cytochrome oxidase biogenesis protein Surf1, facilitates heme A insertion | 0.40 | OH686_22095 | | LSU rRNA pseudouridine(955/2504/2580) synthase | low | > 80 |
| Shewanella amazonensis SB2B | 0.17 | Sama_3488 | | hypothetical protein (RefSeq) | 0.42 | Sama_1988 | | pseudouridylate synthase (RefSeq) | low | > 62 |
| Pseudomonas fluorescens FW300-N2E3 | 0.17 | AO353_10855 | | cytochrome oxidase biogenesis protein Surf1,facilitates heme A insertion | 0.40 | AO353_01405 | | 23S rRNA pseudouridylate synthase | low | > 101 |
| Pseudomonas fluorescens FW300-N2C3 | 0.17 | AO356_11185 | | cytochrome oxidase biogenesis protein Surf1,facilitates heme A insertion | 0.39 | AO356_20125 | | 23S rRNA pseudouridylate synthase | low | > 104 |
| Castellaniella sp019104865 MT123 | 0.17 | ABCV34_RS13245 | | SURF1 family protein | 0.47 | ABCV34_RS08415 | | RluA family pseudouridine synthase | low | > 48 |
| Pseudomonas fluorescens GW456-L13 | 0.16 | PfGW456L13_609 | | Cytochrome oxidase biogenesis protein Surf1, facilitates heme A insertion | 0.39 | PfGW456L13_2097 | | Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) | low | > 87 |
| Marinobacter adhaerens HP15 | 0.16 | HP15_3776 | | conserved hypothetical protein, membrane | 0.44 | HP15_2221 | | pseudouridine synthase, RluA family | low | > 73 |
| Pseudomonas stutzeri RCH2 | 0.16 | Psest_4331 | | Uncharacterized conserved protein | 0.39 | Psest_1680 | | pseudouridine synthase, RluA family | — | — |
| Dyella japonica UNC79MFTsu3.2 | 0.16 | ABZR86_RS12910 | | SURF1 family protein | 0.34 | ABZR86_RS02725 | | RluA family pseudouridine synthase | low | > 74 |
| Pseudomonas sp. RS175 | 0.16 | PFR28_04686 | | hypothetical protein | 0.39 | PFR28_03018 | | Ribosomal large subunit pseudouridine synthase C | low | > 88 |
| Pseudomonas fluorescens FW300-N2E2 | 0.16 | Pf6N2E2_4103 | | Cytochrome oxidase biogenesis protein Surf1, facilitates heme A insertion | 0.39 | Pf6N2E2_5944 | | Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) | low | > 103 |
| Pseudomonas fluorescens FW300-N1B4 | 0.16 | Pf1N1B4_1859 | | Cytochrome oxidase biogenesis protein Surf1, facilitates heme A insertion | 0.38 | Pf1N1B4_459 | | Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) | — | — |
| Pseudomonas fluorescens SBW25 | 0.16 | PFLU_RS00315 | | SURF1 family protein | 0.39 | PFLU_RS23095 | | 23S rRNA pseudouridine(955/2504/2580) synthase RluC | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.16 | PFLU_RS00315 | | SURF1 family protein | 0.39 | PFLU_RS23095 | | 23S rRNA pseudouridine(955/2504/2580) synthase RluC | low | > 109 |
| Pseudomonas simiae WCS417 | 0.15 | PS417_00325 | | hypothetical protein | 0.39 | PS417_21480 | | 23S rRNA pseudouridylate synthase | low | > 88 |
| Lysobacter sp. OAE881 | 0.15 | ABIE51_RS19180 | | SURF1 family protein | 0.38 | ABIE51_RS11800 | | RluA family pseudouridine synthase | low | > 62 |
| Rhodanobacter denitrificans MT42 | 0.15 | LRK55_RS06840 | | SURF1 family protein | 0.38 | LRK55_RS17750 | | RluA family pseudouridine synthase | low | > 63 |
| Rhodanobacter denitrificans FW104-10B01 | 0.15 | LRK54_RS07100 | | SURF1 family protein | 0.38 | LRK54_RS17895 | | RluA family pseudouridine synthase | low | > 59 |
| Kangiella aquimarina DSM 16071 | 0.13 | B158DRAFT_0668 | | Uncharacterized conserved protein | 0.40 | B158DRAFT_1770 | | ribosomal large subunit pseudouridine synthase C (EC 5.4.99.24) | low | > 40 |
| Alteromonas macleodii MIT1002 | 0.13 | MIT1002_04030 | | hypothetical protein | 0.40 | MIT1002_01725 | | Ribosomal large subunit pseudouridine synthase C | low | > 70 |
| Caulobacter crescentus NA1000 Δfur | 0.13 | CCNA_01847 | | cytochrome c oxidase assembly protein Surf1 | 0.21 | CCNA_02059 | | ribosomal large subunit pseudouridine synthase C | low | > 67 |
| Caulobacter crescentus NA1000 | 0.13 | CCNA_01847 | | cytochrome c oxidase assembly protein Surf1 | 0.21 | CCNA_02059 | | ribosomal large subunit pseudouridine synthase C | low | > 66 |
| Azospirillum brasilense Sp245 | 0.12 | AZOBR_RS10560 | | hypothetical protein | 0.20 | AZOBR_RS06905 | | pseudouridine synthase | low | > 97 |
| Rhodanobacter sp. FW510-T8 | 0.12 | OKGIIK_16540 | | SURF1-like protein | 0.38 | OKGIIK_07405 | rluA | 23S rRNA pseudouridine(955/2504/2580) synthase | low | > 52 |
| Azospirillum sp. SherDot2 | 0.12 | MPMX19_00891 | | hypothetical protein | 0.20 | MPMX19_01718 | | Ribosomal large subunit pseudouridine synthase C | low | > 112 |
| Agrobacterium fabrum C58 | 0.12 | Atu0773 | | surfeit 1 | 0.24 | Atu1471 | | ribosomal large subunit pseudouridine synthase C | — | — |
Not shown: 1 genomes with orthologs for GFF695 only; 41 genomes with orthologs for GFF121 only