Conservation of cofitness between EX31_RS21480 and EX31_RS11760 in Rahnella sp. WP5

57 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Rahnella sp. WP5 1.0 EX31_RS21480 5-formyltetrahydrofolate cyclo-ligase 1.0 EX31_RS11760 methionine synthase 0.63 3
Pectobacterium carotovorum WPP14 0.69 HER17_RS19095 5-formyltetrahydrofolate cyclo-ligase 0.88 HER17_RS02310 methionine synthase low > 75
Serratia liquefaciens MT49 0.65 IAI46_20895 5-formyltetrahydrofolate cyclo-ligase 0.88 IAI46_23155 methionine synthase low > 86
Dickeya dadantii 3937 0.63 DDA3937_RS02410 5-formyltetrahydrofolate cyclo-ligase 0.86 DDA3937_RS19040 methionine synthase low > 74
Escherichia coli ECOR38 0.62 HEPCGN_18775 ygfA 5-formyltetrahydrofolate cyclo-ligase 0.86 HEPCGN_11885 metH methionine synthase low > 87
Dickeya dianthicola 67-19 0.62 HGI48_RS02370 5-formyltetrahydrofolate cyclo-ligase 0.86 HGI48_RS19130 methionine synthase low > 71
Escherichia coli Nissle 1917 0.62 ECOLIN_RS16205 5-formyltetrahydrofolate cyclo-ligase 0.86 ECOLIN_RS23160 methionine synthase low > 55
Escherichia coli ECRC62 0.62 BNILDI_09930 ygfA 5-formyltetrahydrofolate cyclo-ligase 0.86 BNILDI_06140 metH methionine synthase low > 75
Escherichia coli ECRC99 0.62 KEDOAH_08655 ygfA 5-formyltetrahydrofolate cyclo-ligase 0.86 KEDOAH_14920 metH methionine synthase — —
Escherichia coli ECRC98 0.62 JDDGAC_23125 ygfA 5-formyltetrahydrofolate cyclo-ligase 0.86 JDDGAC_16865 metH methionine synthase low > 86
Escherichia coli ECRC100 0.62 OKFHMN_19485 ygfA 5-formyltetrahydrofolate cyclo-ligase 0.86 OKFHMN_13240 metH methionine synthase low > 80
Escherichia coli ECOR27 0.62 NOLOHH_11395 ygfA 5-formyltetrahydrofolate cyclo-ligase 0.86 NOLOHH_05380 metH methionine synthase low > 75
Escherichia coli ECRC102 0.62 NIAGMN_17250 ygfA 5-formyltetrahydrofolate cyclo-ligase 0.86 NIAGMN_10990 metH methionine synthase — —
Escherichia fergusonii Becca 0.62 EFB2_00991 5-formyltetrahydrofolate cyclo-ligase 0.86 EFB2_04592 Methionine synthase low > 86
Escherichia coli ECRC101 0.62 MCAODC_10005 ygfA 5-formyltetrahydrofolate cyclo-ligase 0.86 MCAODC_03740 metH methionine synthase low > 87
Enterobacter sp. TBS_079 0.60 MPMX20_03770 5-formyltetrahydrofolate cyclo-ligase 0.86 MPMX20_00235 Methionine synthase low > 85
Klebsiella michiganensis M5al 0.60 BWI76_RS23915 5-formyltetrahydrofolate cyclo-ligase 0.87 BWI76_RS01685 methionine synthase 0.23 35
Escherichia coli BW25113 0.60 b2912 ygfA putative ligase (VIMSS) 0.86 b4019 metH B12-dependent methionine synthase (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.60 OHPLBJKB_00804 5-formyltetrahydrofolate cyclo-ligase 0.86 OHPLBJKB_04030 Methionine synthase low > 73
Escherichia coli BL21 0.60 ECD_02743 5-formyltetrahydrofolate cyclo-ligase family protein 0.86 ECD_03891 homocysteine-N5-methyltetrahydrofolate transmethylase, B12-dependent low > 61
Dickeya dianthicola ME23 0.59 DZA65_RS02475 5-formyltetrahydrofolate cyclo-ligase 0.86 DZA65_RS20250 methionine synthase low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.58 GFF3012 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) 0.86 GFF1358 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) low > 78
Pantoea sp. MT58 0.56 IAI47_03730 5-formyltetrahydrofolate cyclo-ligase 0.87 IAI47_17990 methionine synthase low > 76
Enterobacter asburiae PDN3 0.55 EX28DRAFT_2964 5,10-methenyltetrahydrofolate synthetase 0.87 EX28DRAFT_4326 methionine synthase (B12-dependent) (EC 2.1.1.13) 0.53 71
Shewanella loihica PV-4 0.52 Shew_3069 5-formyltetrahydrofolate cyclo-ligase (RefSeq) 0.65 Shew_0710 metH B12-dependent methionine synthase (RefSeq) low > 60
Shewanella oneidensis MR-1 0.51 SO0774 5-formyltetrahydrofolate cyclo-ligase family protein (NCBI ptt file) 0.66 SO1030 metH 5-methyltetrahydrofolate--homocysteine methyltransferase (NCBI ptt file) 0.81 5
Vibrio cholerae E7946 ATCC 55056 0.51 CSW01_12545 5-formyltetrahydrofolate cyclo-ligase 0.75 CSW01_02060 methionine synthase low > 62
Shewanella sp. ANA-3 0.50 Shewana3_3506 5-formyltetrahydrofolate cyclo-ligase (RefSeq) 0.66 Shewana3_3282 metH B12-dependent methionine synthase (RefSeq) low > 73
Shewanella amazonensis SB2B 0.41 Sama_2726 5-formyltetrahydrofolate cyclo-ligase family protein (RefSeq) 0.67 Sama_0758 metH B12-dependent methionine synthase (RefSeq) 0.91 1
Pseudomonas stutzeri RCH2 0.31 Psest_0170 5,10-methenyltetrahydrofolate synthetase 0.67 Psest_2102 5-methyltetrahydrofolate--homocysteine methyltransferase low > 67
Pseudomonas syringae pv. syringae B728a ΔmexB 0.29 Psyr_0317 5-formyltetrahydrofolate cyclo-ligase 0.65 Psyr_2464 methionine synthase (B12-dependent) low > 86
Pseudomonas syringae pv. syringae B728a 0.29 Psyr_0317 5-formyltetrahydrofolate cyclo-ligase 0.65 Psyr_2464 methionine synthase (B12-dependent) 0.47 10
Marinobacter adhaerens HP15 0.28 HP15_3211 5-formyltetrahydrofolate cyclo-ligase 0.63 HP15_1792 B12-dependent methionine synthase low > 73
Pseudomonas simiae WCS417 0.28 PS417_27305 5-formyltetrahydrofolate cyclo-ligase 0.66 PS417_12310 methionine synthase 0.76 1
Kangiella aquimarina DSM 16071 0.28 B158DRAFT_0528 5-formyltetrahydrofolate cyclo-ligase 0.65 B158DRAFT_2466 methionine synthase (B12-dependent) (EC 2.1.1.13) low > 40
Pseudomonas fluorescens SBW25-INTG 0.27 PFLU_RS28965 5-formyltetrahydrofolate cyclo-ligase 0.66 PFLU_RS13000 methionine synthase 0.52 5
Pseudomonas fluorescens SBW25 0.27 PFLU_RS28965 5-formyltetrahydrofolate cyclo-ligase 0.66 PFLU_RS13000 methionine synthase 0.62 75
Pseudomonas fluorescens FW300-N2E3 0.26 AO353_08780 5-formyltetrahydrofolate cyclo-ligase 0.66 AO353_21615 methionine synthase 0.58 64
Pseudomonas fluorescens GW456-L13 0.26 PfGW456L13_892 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) 0.65 PfGW456L13_2847 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) low > 87
Pseudomonas fluorescens FW300-N1B4 0.25 Pf1N1B4_2225 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) 0.65 Pf1N1B4_5661 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) 0.54 49
Pseudomonas putida KT2440 0.25 PP_5203 5-formyltetrahydrofolate cyclo-ligase 0.66 PP_2375 cobalamin-dependent methionine synthase 0.62 1
Pseudomonas sp. RS175 0.25 PFR28_04325 5-formyltetrahydrofolate cyclo-ligase 0.65 PFR28_01369 Methionine synthase 0.34 18
Pseudomonas fluorescens FW300-N2E2 0.24 Pf6N2E2_4476 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) 0.65 Pf6N2E2_2068 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) 0.68 1
Pseudomonas fluorescens FW300-N2C3 0.24 AO356_12990 5-formyltetrahydrofolate cyclo-ligase 0.65 AO356_00545 methionine synthase 0.58 24
Sinorhizobium meliloti 1021 0.24 SMc03974 hypothetical protein 0.60 SMc03112 B12-dependent methionine synthase 0.55 33
Acinetobacter radioresistens SK82 0.24 MPMX26_02298 5-formyltetrahydrofolate cyclo-ligase 0.61 MPMX26_02351 Methionine synthase low > 36
Pseudomonas sp. S08-1 0.24 OH686_11225 5-formyltetrahydrofolate cyclo-ligase 0.67 OH686_03335 methionine synthase low > 80
Rhizobium sp. OAE497 0.23 ABIE40_RS15645 5-formyltetrahydrofolate cyclo-ligase 0.60 ABIE40_RS12135 methionine synthase low > 107
Agrobacterium fabrum C58 0.22 Atu3731 5-formyltetrahydrofolate cyclo-ligase 0.60 Atu2155 methionine synthase 0.79 47
Rhodospirillum rubrum S1H 0.22 Rru_A1084 5-formyltetrahydrofolate cyclo-ligase (NCBI) 0.21 Rru_A1531 5-methyltetrahydrofolate--homocysteine methyltransferase (NCBI) — —
Parabacteroides merdae CL09T00C40 0.20 HMPREF1078_RS14635 5-formyltetrahydrofolate cyclo-ligase 0.50 HMPREF1078_RS14955 methionine synthase low > 61
Rhodopseudomonas palustris CGA009 0.19 TX73_023120 5-formyltetrahydrofolate cyclo-ligase 0.60 TX73_019180 methionine synthase low > 86
Pontibacter actiniarum KMM 6156, DSM 19842 0.19 CA264_15880 5-formyltetrahydrofolate cyclo-ligase 0.60 CA264_16785 methionine synthase 0.51 4
Herbaspirillum seropedicae SmR1 0.17 HSERO_RS21420 5-formyltetrahydrofolate cyclo-ligase 0.60 HSERO_RS21740 methionine synthase low > 78
Magnetospirillum magneticum AMB-1 0.17 AMB_RS16280 5-formyltetrahydrofolate cyclo-ligase 0.21 AMB_RS02225 methionine synthase — —
Mycobacterium tuberculosis H37Rv 0.15 Rv0992c Conserved hypothetical protein 0.21 Rv2124c 5-methyltetrahydrofolate--homocystein methyltransferase MetH (methionine synthase, vitamin-B12 dependent isozyme) (ms) low > 58
Castellaniella sp019104865 MT123 0.15 ABCV34_RS13555 5-formyltetrahydrofolate cyclo-ligase 0.56 ABCV34_RS14560 methionine synthase — —
Azospirillum sp. SherDot2 0.12 MPMX19_00693 5-formyltetrahydrofolate cyclo-ligase 0.21 MPMX19_00637 Methionine synthase — —

Not shown: 21 genomes with orthologs for EX31_RS21480 only; 5 genomes with orthologs for EX31_RS11760 only