| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Enterobacter asburiae PDN3 | 1.0 | EX28DRAFT_3732 | | poly(A) polymerase | 1.0 | EX28DRAFT_3073 | | type I secretion outer membrane protein, TolC family | 0.63 | 19 |
| Enterobacter sp. TBS_079 | 0.89 | MPMX20_00829 | | Poly(A) polymerase I | 0.94 | MPMX20_03882 | | Outer membrane protein TolC | low | > 85 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.86 | GFF89 | | Poly(A) polymerase (EC 2.7.7.19) | 0.88 | GFF3149 | | Type I secretion outer membrane protein, TolC precursor | 0.54 | 42 |
| Escherichia fergusonii Becca | 0.85 | EFB2_03901 | | Poly(A) polymerase I | 0.84 | EFB2_00773 | | Outer membrane protein TolC | low | > 86 |
| Escherichia coli BL21 | 0.85 | ECD_00142 | | poly(A) polymerase | 0.84 | ECD_02907 | | transport channel | low | > 61 |
| Escherichia coli ECRC101 | 0.85 | MCAODC_00870 | pcnB | polynucleotide adenylyltransferase PcnB | 0.84 | MCAODC_09320 | tolC | outer membrane channel protein TolC | low | > 87 |
| Escherichia coli ECOR38 | 0.85 | HEPCGN_08305 | pcnB | polynucleotide adenylyltransferase PcnB | 0.84 | HEPCGN_17680 | tolC | outer membrane channel protein TolC | low | > 87 |
| Escherichia coli BW25113 | 0.85 | b0143 | pcnB | poly(A) polymerase I (VIMSS) | 0.84 | b3035 | tolC | outer membrane channel; specific tolerance to colicin E1; segregation of daughter chromosomes (VIMSS) | low | > 76 |
| Escherichia coli ECRC102 | 0.85 | NIAGMN_08205 | pcnB | polynucleotide adenylyltransferase PcnB | 0.84 | NIAGMN_16570 | tolC | outer membrane channel protein TolC | — | — |
| Escherichia coli ECRC99 | 0.85 | KEDOAH_17800 | pcnB | polynucleotide adenylyltransferase PcnB | 0.84 | KEDOAH_09340 | tolC | outer membrane channel protein TolC | — | — |
| Escherichia coli Nissle 1917 | 0.85 | ECOLIN_RS00790 | | polynucleotide adenylyltransferase PcnB | 0.84 | ECOLIN_RS17515 | | outer membrane channel protein TolC | low | > 55 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.85 | OHPLBJKB_03519 | | Poly(A) polymerase I | 0.84 | OHPLBJKB_00668 | | Outer membrane protein TolC | low | > 73 |
| Escherichia coli ECRC100 | 0.85 | OKFHMN_10355 | pcnB | polynucleotide adenylyltransferase PcnB | 0.84 | OKFHMN_18805 | tolC | outer membrane channel protein TolC | low | > 80 |
| Escherichia coli ECRC98 | 0.85 | JDDGAC_13950 | pcnB | polynucleotide adenylyltransferase PcnB | 0.84 | JDDGAC_22440 | tolC | outer membrane channel protein TolC | low | > 86 |
| Escherichia coli ECOR27 | 0.85 | NOLOHH_02700 | pcnB | polynucleotide adenylyltransferase PcnB | 0.84 | NOLOHH_10610 | tolC | outer membrane channel protein TolC | low | > 75 |
| Escherichia coli ECRC62 | 0.85 | BNILDI_08970 | pcnB | polynucleotide adenylyltransferase PcnB | 0.84 | BNILDI_00905 | tolC | outer membrane channel protein TolC | low | > 75 |
| Klebsiella michiganensis M5al | 0.82 | BWI76_RS05005 | | polynucleotide adenylyltransferase | 0.84 | BWI76_RS24400 | | outer membrane channel protein TolC | low | > 92 |
| Erwinia tracheiphila SCR3 | 0.78 | LU632_RS20090 | pcnB | polynucleotide adenylyltransferase PcnB | 0.74 | LU632_RS20635 | tolC | outer membrane channel protein TolC | — | — |
| Dickeya dadantii 3937 | 0.77 | DDA3937_RS15945 | | polynucleotide adenylyltransferase PcnB | 0.69 | DDA3937_RS01740 | | outer membrane channel protein TolC | low | > 74 |
| Dickeya dianthicola 67-19 | 0.76 | HGI48_RS16060 | | polynucleotide adenylyltransferase PcnB | 0.70 | HGI48_RS01635 | | outer membrane channel protein TolC | low | > 71 |
| Pantoea sp. MT58 | 0.76 | IAI47_15645 | | polynucleotide adenylyltransferase PcnB | 0.75 | IAI47_03135 | | outer membrane channel protein TolC | low | > 76 |
| Dickeya dianthicola ME23 | 0.76 | DZA65_RS17145 | | polynucleotide adenylyltransferase PcnB | 0.69 | DZA65_RS01710 | | outer membrane channel protein TolC | low | > 75 |
| Serratia liquefaciens MT49 | 0.76 | IAI46_21220 | | polynucleotide adenylyltransferase PcnB | 0.74 | IAI46_21945 | | outer membrane channel protein TolC | low | > 86 |
| Pectobacterium carotovorum WPP14 | 0.75 | HER17_RS05570 | | polynucleotide adenylyltransferase PcnB | 0.71 | HER17_RS19825 | | outer membrane channel protein TolC | low | > 75 |
| Vibrio cholerae E7946 ATCC 55056 | 0.58 | CSW01_03145 | | polynucleotide adenylyltransferase PcnB | 0.38 | CSW01_12335 | | outer membrane protein TolC | low | > 62 |
| Shewanella oneidensis MR-1 | 0.54 | SO0872 | pcnB | polyA polymerase (NCBI ptt file) | 0.34 | SO3904 | tolC | outer membrane protein TolC (NCBI ptt file) | low | > 76 |
| Shewanella sp. ANA-3 | 0.54 | Shewana3_3406 | | poly(A) polymerase (RefSeq) | 0.34 | Shewana3_0725 | tolC | outer membrane channel protein (RefSeq) | low | > 73 |
| Shewanella loihica PV-4 | 0.52 | Shew_3131 | | poly(A) polymerase (RefSeq) | 0.32 | Shew_0544 | tolC | outer membrane channel protein (RefSeq) | low | > 60 |
| Alteromonas macleodii MIT1002 | 0.52 | MIT1002_03692 | | Poly(A) polymerase I precursor | 0.35 | MIT1002_00670 | | Outer membrane protein TolC precursor | low | > 70 |
| Shewanella amazonensis SB2B | 0.51 | Sama_0778 | | tRNA nucleotidyltransferase (CCA-adding enzyme) (RefSeq) | 0.32 | Sama_3048 | tolC | outer membrane channel protein (RefSeq) | low | > 62 |
| Kangiella aquimarina DSM 16071 | 0.49 | B158DRAFT_0058 | | poly(A) polymerase | 0.24 | B158DRAFT_0973 | | type I secretion outer membrane protein, TolC family | 0.47 | 22 |
| Marinobacter adhaerens HP15 | 0.46 | HP15_326 | | polyA polymerase | 0.23 | HP15_451 | | type I secretion outer membrane protein, TolC family | — | — |
| Rhodanobacter denitrificans FW104-10B01 | 0.45 | LRK54_RS15105 | | polynucleotide adenylyltransferase PcnB | 0.22 | LRK54_RS06685 | | TolC family outer membrane protein | low | > 59 |
| Rhodanobacter denitrificans MT42 | 0.45 | LRK55_RS14820 | | polynucleotide adenylyltransferase PcnB | 0.22 | LRK55_RS06430 | | TolC family outer membrane protein | low | > 63 |
| Rhodanobacter sp. FW510-T8 | 0.45 | OKGIIK_03875 | pcnB | tRNA nucleotidyltransferase/poly(A) polymerase | 0.22 | OKGIIK_16950 | tolC | Outer membrane protein TolC | low | > 52 |
| Dyella japonica UNC79MFTsu3.2 | 0.45 | ABZR86_RS00805 | | polynucleotide adenylyltransferase PcnB | 0.24 | ABZR86_RS17210 | | TolC family outer membrane protein | low | > 74 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.44 | Xcc-8004.3054.1 | | Poly(A) polymerase (EC 2.7.7.19) | 0.21 | Xcc-8004.1042.1 | | Type I secretion outer membrane protein, TolC precursor | — | — |
| Lysobacter sp. OAE881 | 0.44 | ABIE51_RS08015 | | polynucleotide adenylyltransferase PcnB | 0.19 | ABIE51_RS17615 | | TolC family outer membrane protein | low | > 62 |
| Pseudomonas putida KT2440 | 0.43 | PP_4697 | | poly(A) polymerase | 0.24 | PP_4923 | | Outer membrane efflux protein | low | > 96 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.43 | Psyr_0830 | | Poly(A) polymerase | 0.22 | Psyr_0543 | | Type I secretion outer membrane protein, TolC | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.43 | Psyr_0830 | | Poly(A) polymerase | 0.22 | Psyr_0543 | | Type I secretion outer membrane protein, TolC | low | > 86 |
| Pseudomonas sp. S08-1 | 0.43 | OH686_17255 | | Poly(A) polymerase | 0.23 | OH686_15890 | | Outer membrane channel TolC (OpmH) | low | > 80 |
| Pseudomonas fluorescens FW300-N2E3 | 0.42 | AO353_14395 | | poly(A) polymerase | 0.22 | AO353_13005 | | channel protein TolC | low | > 101 |
| Pseudomonas fluorescens FW300-N1B4 | 0.42 | Pf1N1B4_2856 | | Poly(A) polymerase (EC 2.7.7.19) | 0.23 | Pf1N1B4_1448 | | Type I secretion outer membrane protein, TolC precursor | low | > 87 |
| Pseudomonas fluorescens GW456-L13 | 0.42 | PfGW456L13_1523 | | Poly(A) polymerase (EC 2.7.7.19) | 0.24 | PfGW456L13_188 | | Type I secretion outer membrane protein, TolC precursor | low | > 87 |
| Pseudomonas fluorescens SBW25-INTG | 0.42 | PFLU_RS25740 | | polynucleotide adenylyltransferase PcnB | 0.22 | PFLU_RS02425 | | TolC family outer membrane protein | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.42 | PFLU_RS25740 | | polynucleotide adenylyltransferase PcnB | 0.22 | PFLU_RS02425 | | TolC family outer membrane protein | low | > 109 |
| Pseudomonas sp. RS175 | 0.42 | PFR28_03719 | | Poly(A) polymerase I | 0.22 | PFR28_05090 | | Outer membrane protein TolC | low | > 88 |
| Pseudomonas simiae WCS417 | 0.42 | PS417_23900 | | poly(A) polymerase | 0.22 | PS417_02350 | | channel protein TolC | low | > 88 |
| Pseudomonas fluorescens FW300-N2E2 | 0.42 | Pf6N2E2_5155 | | Poly(A) polymerase (EC 2.7.7.19) | 0.23 | Pf6N2E2_3645 | | Type I secretion outer membrane protein, TolC precursor | low | > 103 |
| Pseudomonas fluorescens FW300-N2C3 | 0.41 | AO356_16070 | | poly(A) polymerase | 0.23 | AO356_08815 | | channel protein TolC | low | > 104 |
| Pseudomonas stutzeri RCH2 | 0.41 | Psest_0998 | | poly(A) polymerase | 0.24 | Psest_0476 | | type I secretion outer membrane protein, TolC family | 0.20 | 56 |
| Ralstonia sp. UNC404CL21Col | 0.36 | ABZR87_RS00935 | | polynucleotide adenylyltransferase PcnB | 0.18 | ABZR87_RS08765 | | TolC family outer membrane protein | low | > 80 |
| Dechlorosoma suillum PS | 0.36 | Dsui_1515 | | poly(A) polymerase | 0.19 | Dsui_0405 | | type I secretion outer membrane protein, TolC family | 0.75 | 23 |
| Variovorax sp. OAS795 | 0.33 | ABID97_RS08710 | | polynucleotide adenylyltransferase PcnB | 0.18 | ABID97_RS21375 | | TolC family outer membrane protein | low | > 91 |
| Variovorax sp. SCN45 | 0.33 | GFF3943 | | Poly(A) polymerase (EC 2.7.7.19) | 0.18 | GFF6530 | | Type I secretion outer membrane protein, TolC family | low | > 127 |
| Acidovorax sp. GW101-3H11 | 0.32 | Ac3H11_1313 | | Poly(A) polymerase (EC 2.7.7.19) | 0.20 | Ac3H11_2219 | | Type I secretion outer membrane protein, TolC precursor | — | — |
| Acinetobacter radioresistens SK82 | 0.30 | MPMX26_00543 | | Poly(A) polymerase I | 0.15 | MPMX26_00182 | | Outer membrane protein TolC | low | > 36 |
Not shown: 1 genomes with orthologs for EX28DRAFT_3732 only; 21 genomes with orthologs for EX28DRAFT_3073 only