Conservation of cofitness between ECD_02743 and ECD_03828 in Escherichia coli BL21

52 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_02743 5-formyltetrahydrofolate cyclo-ligase family protein 1.0 ECD_03828 catalase-peroxidase HPI, heme b-containing low > 61
Escherichia fergusonii Becca 1.00 EFB2_00991 5-formyltetrahydrofolate cyclo-ligase 1.00 EFB2_04671 Catalase-peroxidase low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00804 5-formyltetrahydrofolate cyclo-ligase 1.00 OHPLBJKB_04108 Catalase-peroxidase low > 73
Escherichia coli ECRC99 1.00 KEDOAH_08655 ygfA 5-formyltetrahydrofolate cyclo-ligase 1.00 KEDOAH_14500 katG catalase/peroxidase HPI — —
Escherichia coli ECRC100 1.00 OKFHMN_19485 ygfA 5-formyltetrahydrofolate cyclo-ligase 1.00 OKFHMN_13660 katG catalase/peroxidase HPI low > 80
Escherichia coli ECOR27 1.00 NOLOHH_11395 ygfA 5-formyltetrahydrofolate cyclo-ligase 1.00 NOLOHH_05805 katG catalase/peroxidase HPI low > 75
Escherichia coli ECRC62 1.00 BNILDI_09930 ygfA 5-formyltetrahydrofolate cyclo-ligase 1.00 BNILDI_05730 katG catalase/peroxidase HPI low > 75
Escherichia coli ECRC102 1.00 NIAGMN_17250 ygfA 5-formyltetrahydrofolate cyclo-ligase 1.00 NIAGMN_11415 katG catalase/peroxidase HPI — —
Escherichia coli ECRC101 1.00 MCAODC_10005 ygfA 5-formyltetrahydrofolate cyclo-ligase 1.00 MCAODC_04160 katG catalase/peroxidase HPI low > 87
Escherichia coli ECRC98 1.00 JDDGAC_23125 ygfA 5-formyltetrahydrofolate cyclo-ligase 1.00 JDDGAC_17285 katG catalase/peroxidase HPI low > 86
Escherichia coli Nissle 1917 0.99 ECOLIN_RS16205 5-formyltetrahydrofolate cyclo-ligase 1.00 ECOLIN_RS22765 catalase/peroxidase HPI low > 55
Escherichia coli BW25113 0.99 b2912 ygfA putative ligase (VIMSS) 1.00 b3942 katG catalase/hydroperoxidase HPI(I) (NCBI) low > 76
Escherichia coli ECOR38 0.99 HEPCGN_18775 ygfA 5-formyltetrahydrofolate cyclo-ligase 1.00 HEPCGN_12305 katG catalase/peroxidase HPI 0.60 74
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.85 GFF3012 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) 0.91 GFF2330 Catalase (EC 1.11.1.6) / Peroxidase (EC 1.11.1.7) low > 78
Enterobacter sp. TBS_079 0.82 MPMX20_03770 5-formyltetrahydrofolate cyclo-ligase 0.87 MPMX20_04528 Catalase-peroxidase low > 85
Klebsiella michiganensis M5al 0.79 BWI76_RS23915 5-formyltetrahydrofolate cyclo-ligase 0.81 BWI76_RS13925 catalase/peroxidase HPI low > 92
Enterobacter asburiae PDN3 0.78 EX28DRAFT_2964 5,10-methenyltetrahydrofolate synthetase 0.87 EX28DRAFT_4414 catalase/peroxidase HPI low > 76
Pectobacterium carotovorum WPP14 0.69 HER17_RS19095 5-formyltetrahydrofolate cyclo-ligase 0.56 HER17_RS09165 catalase/peroxidase HPI low > 75
Serratia liquefaciens MT49 0.66 IAI46_20895 5-formyltetrahydrofolate cyclo-ligase 0.61 IAI46_17030 catalase/peroxidase HPI low > 86
Dickeya dadantii 3937 0.64 DDA3937_RS02410 5-formyltetrahydrofolate cyclo-ligase 0.61 DDA3937_RS07265 catalase/peroxidase HPI low > 74
Rahnella sp. WP5 0.64 EX31_RS21480 5-formyltetrahydrofolate cyclo-ligase 0.81 EX31_RS11140 catalase/peroxidase HPI low > 89
Dickeya dianthicola 67-19 0.62 HGI48_RS02370 5-formyltetrahydrofolate cyclo-ligase 0.61 HGI48_RS08090 catalase/peroxidase HPI low > 71
Erwinia tracheiphila SCR3 0.60 LU632_RS05860 5-formyltetrahydrofolate cyclo-ligase 0.81 LU632_RS19500 katG catalase/peroxidase HPI — —
Shewanella loihica PV-4 0.59 Shew_3069 5-formyltetrahydrofolate cyclo-ligase (RefSeq) 0.50 Shew_0709 catalase/peroxidase HPI (RefSeq) low > 60
Dickeya dianthicola ME23 0.59 DZA65_RS02475 5-formyltetrahydrofolate cyclo-ligase 0.62 DZA65_RS08685 catalase/peroxidase HPI low > 75
Pantoea sp. MT58 0.59 IAI47_03730 5-formyltetrahydrofolate cyclo-ligase 0.80 IAI47_07215 catalase/peroxidase HPI low > 76
Vibrio cholerae E7946 ATCC 55056 0.57 CSW01_12545 5-formyltetrahydrofolate cyclo-ligase 0.58 CSW01_07835 catalase-peroxidase low > 62
Shewanella oneidensis MR-1 0.56 SO0774 5-formyltetrahydrofolate cyclo-ligase family protein (NCBI ptt file) 0.55 SO4405 katG-2 catalase/peroxidase HPI (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.55 Shewana3_3506 5-formyltetrahydrofolate cyclo-ligase (RefSeq) 0.54 Shewana3_0306 catalase/peroxidase HPI (RefSeq) low > 73
Marinobacter adhaerens HP15 0.32 HP15_3211 5-formyltetrahydrofolate cyclo-ligase 0.56 HP15_1397 peroxidase/catalase HPI low > 73
Pseudomonas stutzeri RCH2 0.30 Psest_0170 5,10-methenyltetrahydrofolate synthetase 0.58 Psest_2741 catalase/peroxidase HPI low > 67
Pseudomonas fluorescens FW300-N1B4 0.30 Pf1N1B4_2225 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) 0.58 Pf1N1B4_4230 Catalase (EC 1.11.1.6) / Peroxidase (EC 1.11.1.7) low > 87
Pseudomonas fluorescens FW300-N2E3 0.29 AO353_08780 5-formyltetrahydrofolate cyclo-ligase 0.60 AO353_23210 hydroperoxidase low > 101
Pseudomonas sp. S08-1 0.28 OH686_11225 5-formyltetrahydrofolate cyclo-ligase 0.69 OH686_15490 catalase/peroxidase HPI low > 80
Pseudomonas putida KT2440 0.27 PP_5203 5-formyltetrahydrofolate cyclo-ligase 0.60 PP_3668 Catalase-peroxidase low > 96
Pseudomonas fluorescens FW300-N2E2 0.27 Pf6N2E2_4476 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) 0.61 Pf6N2E2_3430 Catalase (EC 1.11.1.6) / Peroxidase (EC 1.11.1.7) low > 103
Pseudomonas syringae pv. syringae B728a 0.27 Psyr_0317 5-formyltetrahydrofolate cyclo-ligase 0.60 Psyr_4208 heme catalase/peroxidase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.27 Psyr_0317 5-formyltetrahydrofolate cyclo-ligase 0.60 Psyr_4208 heme catalase/peroxidase low > 86
Pseudomonas fluorescens FW300-N2C3 0.27 AO356_12990 5-formyltetrahydrofolate cyclo-ligase 0.61 AO356_07735 hydroperoxidase low > 104
Lysobacter sp. OAE881 0.24 ABIE51_RS17355 5-formyltetrahydrofolate cyclo-ligase 0.60 ABIE51_RS07780 catalase/peroxidase HPI low > 62
Variovorax sp. SCN45 0.23 GFF7649 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) 0.60 GFF4692 Catalase-peroxidase KatG (EC 1.11.1.21) — —
Agrobacterium fabrum C58 0.23 Atu3731 5-formyltetrahydrofolate cyclo-ligase 0.54 Atu4642 catalase — —
Xanthomonas campestris pv. campestris strain 8004 0.22 Xcc-8004.1138.1 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) 0.60 Xcc-8004.3762.1 Catalase (EC 1.11.1.6) / Peroxidase (EC 1.11.1.7) low > 74
Sinorhizobium meliloti 1021 0.21 SMc03974 hypothetical protein 0.58 SMa2379 KatB catalase/peroxidase low > 103
Rhizobium sp. OAE497 0.20 ABIE40_RS15645 5-formyltetrahydrofolate cyclo-ligase 0.57 ABIE40_RS15040 catalase/peroxidase HPI low > 107
Caulobacter crescentus NA1000 0.18 CCNA_03354 5-formyltetrahydrofolate cyclo-ligase 0.57 CCNA_03138 peroxidase/catalase katG low > 66
Caulobacter crescentus NA1000 Δfur 0.18 CCNA_03354 5-formyltetrahydrofolate cyclo-ligase 0.57 CCNA_03138 peroxidase/catalase katG low > 67
Rhodopseudomonas palustris CGA009 0.18 TX73_023120 5-formyltetrahydrofolate cyclo-ligase 0.60 TX73_002230 catalase/peroxidase HPI low > 86
Sphingomonas koreensis DSMZ 15582 0.17 Ga0059261_0735 5,10-methenyltetrahydrofolate synthetase 0.51 Ga0059261_3628 catalase/peroxidase HPI low > 68
Dyella japonica UNC79MFTsu3.2 0.15 ABZR86_RS11995 5-formyltetrahydrofolate cyclo-ligase 0.60 ABZR86_RS00615 catalase/peroxidase HPI low > 74
Echinicola vietnamensis KMM 6221, DSM 17526 0.15 Echvi_1511 5,10-methenyltetrahydrofolate synthetase 0.64 Echvi_1165 catalase/peroxidase HPI low > 79
Cupriavidus basilensis FW507-4G11 0.14 RR42_RS01400 5-formyltetrahydrofolate cyclo-ligase 0.61 RR42_RS26270 hydroperoxidase low > 128
Phaeobacter inhibens DSM 17395 0.13 PGA1_c21820 5-formyltetrahydrofolate cycloligase-like protein 0.51 PGA1_78p00050 peroxidase/catalase HPI low > 62

Not shown: 17 genomes with orthologs for ECD_02743 only; 22 genomes with orthologs for ECD_03828 only