Conservation of cofitness between ECD_00419 and ECD_02482 in Escherichia coli BL21

59 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_00419 DUF454 family inner membrane protein 1.0 ECD_02482 protein disaggregation chaperone 0.51 33
Escherichia coli ECRC102 1.00 NIAGMN_06230 ybaN DUF454 domain-containing protein 1.00 NIAGMN_19035 clpB ATP-dependent chaperone ClpB — —
Escherichia coli ECOR27 1.00 NOLOHH_01105 ybaN DUF454 domain-containing protein 1.00 NOLOHH_12940 clpB ATP-dependent chaperone ClpB low > 75
Escherichia coli ECRC62 1.00 BNILDI_22525 ybaN DUF454 domain-containing protein 1.00 BNILDI_11745 clpB ATP-dependent chaperone ClpB low > 75
Escherichia coli ECOR38 1.00 HEPCGN_06790 ybaN DUF454 domain-containing protein 1.00 HEPCGN_20390 clpB ATP-dependent chaperone ClpB low > 87
Escherichia coli ECRC99 1.00 KEDOAH_19790 ybaN DUF454 domain-containing protein 1.00 KEDOAH_06955 clpB ATP-dependent chaperone ClpB — —
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_03206 Inner membrane protein YbaN 1.00 OHPLBJKB_01114 Chaperone protein ClpB low > 73
Escherichia coli ECRC100 1.00 OKFHMN_08175 ybaN DUF454 domain-containing protein 1.00 OKFHMN_21265 clpB ATP-dependent chaperone ClpB low > 80
Escherichia coli ECRC98 1.00 JDDGAC_11825 ybaN DUF454 domain-containing protein 1.00 JDDGAC_24930 clpB ATP-dependent chaperone ClpB low > 86
Escherichia coli BW25113 1.00 b0468 ybaN conserved inner membrane protein (NCBI) 1.00 b2592 clpB protein disaggregation chaperone (NCBI) low > 76
Escherichia fergusonii Becca 0.99 EFB2_03590 Inner membrane protein YbaN 1.00 EFB2_01298 Chaperone protein ClpB low > 86
Escherichia coli ECRC101 0.99 MCAODC_27400 ybaN DUF454 domain-containing protein 1.00 MCAODC_11795 clpB ATP-dependent chaperone ClpB low > 87
Escherichia coli Nissle 1917 0.99 ECOLIN_RS02785 DUF454 family protein 1.00 ECOLIN_RS14665 ATP-dependent chaperone ClpB — —
Enterobacter sp. TBS_079 0.80 MPMX20_01070 Inner membrane protein YbaN 0.97 MPMX20_03461 Chaperone protein ClpB low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.77 GFF4386 FIG039061: hypothetical protein related to heme utilization 0.97 GFF4184 ClpB protein 0.45 20
Enterobacter asburiae PDN3 0.77 EX28DRAFT_2490 Uncharacterized protein conserved in bacteria 0.97 EX28DRAFT_2693 ATP-dependent chaperone ClpB low > 76
Klebsiella michiganensis M5al 0.74 BWI76_RS06810 hypothetical protein 0.95 BWI76_RS21440 ATP-dependent chaperone ClpB low > 92
Rahnella sp. WP5 0.62 EX31_RS22500 DUF454 family protein 0.87 EX31_RS07560 ATP-dependent chaperone ClpB low > 89
Pantoea sp. MT58 0.62 IAI47_14485 DUF454 family protein 0.89 IAI47_04435 ATP-dependent chaperone ClpB low > 76
Dickeya dianthicola 67-19 0.56 HGI48_RS05820 DUF454 family protein 0.89 HGI48_RS16225 ATP-dependent chaperone ClpB — —
Dickeya dadantii 3937 0.56 DDA3937_RS05770 DUF454 family protein 0.88 DDA3937_RS16100 ATP-dependent chaperone ClpB low > 74
Pectobacterium carotovorum WPP14 0.56 HER17_RS15715 DUF454 family protein 0.88 HER17_RS05410 ATP-dependent chaperone ClpB low > 75
Serratia liquefaciens MT49 0.55 IAI46_05220 DUF454 family protein 0.87 IAI46_03995 ATP-dependent chaperone ClpB low > 86
Dickeya dianthicola ME23 0.54 DZA65_RS06145 DUF454 family protein 0.88 DZA65_RS17320 ATP-dependent chaperone ClpB low > 75
Shewanella amazonensis SB2B 0.46 Sama_1308 hypothetical protein (RefSeq) 0.80 Sama_2603 clpB protein (RefSeq) low > 62
Shewanella oneidensis MR-1 0.45 SO2011 conserved hypothetical protein (NCBI ptt file) 0.79 SO3577 clpB clpB protein (NCBI ptt file) low > 76
Vibrio cholerae E7946 ATCC 55056 0.43 CSW01_05355 DUF454 domain-containing protein 0.78 CSW01_03705 chaperone protein ClpB low > 62
Pseudomonas syringae pv. syringae B728a 0.40 Psyr_3740 Protein of unknown function DUF454 0.69 Psyr_0728 AAA ATPase, central region:Clp, N terminal:Clp, N terminal low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.40 Psyr_3740 Protein of unknown function DUF454 0.69 Psyr_0728 AAA ATPase, central region:Clp, N terminal:Clp, N terminal low > 86
Pseudomonas fluorescens SBW25-INTG 0.38 PFLU_RS21930 DUF454 domain-containing protein 0.70 PFLU_RS03880 ATP-dependent chaperone ClpB low > 109
Pseudomonas fluorescens SBW25 0.38 PFLU_RS21930 DUF454 domain-containing protein 0.70 PFLU_RS03880 ATP-dependent chaperone ClpB low > 109
Shewanella sp. ANA-3 0.37 Shewana3_2448 hypothetical protein (RefSeq) 0.79 Shewana3_3169 ATPase (RefSeq) 0.52 24
Pseudomonas fluorescens FW300-N2E3 0.37 AO353_18420 hypothetical protein 0.70 AO353_14230 ATP-dependent chaperone ClpB low > 101
Pseudomonas simiae WCS417 0.37 PS417_19960 membrane protein 0.70 PS417_03830 protein disaggregation chaperone 0.23 88
Pseudomonas putida KT2440 0.37 PP_4518 conserved protein of unknown function 0.69 PP_0625 Chaperone protein ClpB low > 96
Pseudomonas fluorescens FW300-N1B4 0.37 Pf1N1B4_3531 FIG039061: hypothetical protein related to heme utilization 0.70 Pf1N1B4_2824 ClpB protein low > 87
Pseudomonas stutzeri RCH2 0.36 Psest_1866 Uncharacterized protein conserved in bacteria 0.71 Psest_0711 ATP-dependent chaperone ClpB low > 67
Pseudomonas fluorescens FW300-N2E2 0.36 Pf6N2E2_2647 FIG039061: hypothetical protein related to heme utilization 0.70 Pf6N2E2_5129 ClpB protein low > 103
Hydrogenophaga sp. GW460-11-11-14-LB1 0.36 GFF2586 FIG039061: hypothetical protein related to heme utilization 0.64 GFF3942 ClpB protein low > 90
Pseudomonas fluorescens FW300-N2C3 0.36 AO356_04060 hypothetical protein 0.70 AO356_15935 ATP-dependent chaperone ClpB low > 104
Pseudomonas sp. RS175 0.35 PFR28_00786 Inner membrane protein YbaN 0.70 PFR28_03746 Chaperone protein ClpB low > 88
Pseudomonas fluorescens GW456-L13 0.35 PfGW456L13_4425 FIG039061: hypothetical protein related to heme utilization 0.70 PfGW456L13_1495 ClpB protein low > 87
Fusobacterium nucleatum SB010 0.35 HUW76_00140 YbaN family protein 0.51 HUW76_09935 ATP-dependent chaperone ClpB low > 35
Shewanella loihica PV-4 0.35 Shew_2237 hypothetical protein (RefSeq) 0.79 Shew_2948 ATPase (RefSeq) low > 60
Pseudomonas sp. S08-1 0.35 OH686_20660 Inner membrane protein YbaN 0.70 OH686_16420 ATP-dependent chaperone protein ClpB low > 80
Acidovorax sp. GW101-3H11 0.33 Ac3H11_535 Hypothetical protein DUF454 0.65 Ac3H11_1474 ClpB protein low > 79
Sphingomonas koreensis DSMZ 15582 0.32 Ga0059261_2077 Uncharacterized protein conserved in bacteria 0.59 Ga0059261_1434 ATP-dependent chaperone ClpB low > 68
Bosea sp. OAE506 0.31 ABIE41_RS15805 YbaN family protein 0.58 ABIE41_RS23785 ATP-dependent chaperone ClpB — —
Agrobacterium fabrum C58 0.31 Atu2457 hypothetical protein 0.58 Atu4177 ATP-dependent Clp protease, ATP-binding subunit low > 89
Dinoroseobacter shibae DFL-12 0.30 Dshi_3459 protein of unknown function DUF454 (RefSeq) 0.57 Dshi_0617 ATPase AAA-2 domain protein (RefSeq) low > 64
Phaeobacter inhibens DSM 17395 0.28 PGA1_c35060 inner membrane protein 0.56 PGA1_c32440 chaperone protein ClpB low > 62
Variovorax sp. SCN45 0.27 GFF5173 Hypothetical protein DUF454 0.63 GFF2792 Chaperone protein ClpB (ATP-dependent unfoldase) — —
Rhizobium sp. OAE497 0.27 ABIE40_RS23650 YbaN family protein 0.58 ABIE40_RS17260 ATP-dependent chaperone ClpB low > 107
Xanthomonas campestris pv. campestris strain 8004 0.27 Xcc-8004.843.1 FIG039061: hypothetical protein related to heme utilization 0.71 Xcc-8004.1382.1 ClpB protein low > 74
Castellaniella sp019104865 MT123 0.26 ABCV34_RS06460 YbaN family protein 0.62 ABCV34_RS06205 ATP-dependent chaperone ClpB low > 48
Herbaspirillum seropedicae SmR1 0.25 HSERO_RS22710 hypothetical protein 0.66 HSERO_RS10545 protein disaggregation chaperone low > 78
Acinetobacter radioresistens SK82 0.24 MPMX26_02504 Inner membrane protein YbaN 0.65 MPMX26_01096 Chaperone protein ClpB low > 36
Phocaeicola dorei CL03T12C01 0.23 ABI39_RS22025 YbaN family protein 0.52 ABI39_RS18885 ATP-dependent chaperone ClpB low > 72
Phocaeicola vulgatus CL09T03C04 0.23 HMPREF1058_RS20500 YbaN family protein 0.52 HMPREF1058_RS04980 ATP-dependent chaperone ClpB low > 67
Bacteroides stercoris CC31F 0.20 HMPREF1181_RS13895 YbaN family protein 0.54 HMPREF1181_RS11960 ATP-dependent chaperone ClpB low > 56

Not shown: 0 genomes with orthologs for ECD_00419 only; 42 genomes with orthologs for ECD_02482 only