Conservation of cofitness between ECD_00462 and ECD_00354 in Escherichia coli BL21

49 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_00462 allantoinase 1.0 ECD_00354 tRNA-guanine transglycosylase 0.49 11
Escherichia coli ECOR27 1.00 NOLOHH_00885 allB allantoinase 1.00 NOLOHH_01440 tgt tRNA guanosine(34) transglycosylase Tgt low > 57
Escherichia coli BW25113 1.00 b0512 allB allantoinase (NCBI) 1.00 b0406 tgt queuine tRNA-ribosyltransferase (NCBI) low > 76
Escherichia coli ECOR38 0.99 HEPCGN_06540 allB allantoinase 1.00 HEPCGN_07145 tgt tRNA guanosine(34) transglycosylase Tgt low > 85
Escherichia coli ECRC62 0.99 BNILDI_22315 allB allantoinase 1.00 BNILDI_22855 tgt tRNA guanosine(34) transglycosylase Tgt
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_03169 Allantoinase 1.00 OHPLBJKB_03270 Queuine tRNA-ribosyltransferase low > 73
Escherichia fergusonii Becca 0.99 EFB2_03550 Allantoinase 1.00 EFB2_03651 Queuine tRNA-ribosyltransferase low > 86
Escherichia coli Nissle 1917 0.99 ECOLIN_RS02975 allantoinase AllB 1.00 ECOLIN_RS02445 tRNA guanosine(34) transglycosylase Tgt
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.95 GFF4428 Allantoinase (EC 3.5.2.5) 0.98 GFF4305 tRNA-guanine transglycosylase (EC 2.4.2.29) low > 78
Klebsiella michiganensis M5al 0.93 BWI76_RS07015 cyclic amidohydrolase 0.98 BWI76_RS06300 tRNA guanosine(34) transglycosylase Tgt
Rahnella sp. WP5 0.81 EX31_RS04570 allantoinase AllB 0.91 EX31_RS22095 tRNA guanosine(34) transglycosylase Tgt low > 89
Magnetospirillum magneticum AMB-1 0.23 AMB_RS06420 dihydroorotase 0.52 AMB_RS03090 tRNA guanosine(34) transglycosylase Tgt
Rhodospirillum rubrum S1H 0.22 Rru_A2936 Dihydroorotase multifunctional complex type (NCBI) 0.55 Rru_A0280 Queuine tRNA-ribosyltransferase (NCBI) low > 58
Sphingomonas koreensis DSMZ 15582 0.21 Ga0059261_2410 dihydroorotase, multifunctional complex type 0.52 Ga0059261_1017 tRNA-guanine transglycosylase
Rhodopseudomonas palustris CGA009 0.21 TX73_005495 dihydroorotase 0.50 TX73_013485 tRNA guanosine(34) transglycosylase Tgt
Caulobacter crescentus NA1000 0.21 CCNA_00392 dihydroorotase 0.51 CCNA_01659 queuine tRNA-ribosyltransferase low > 66
Caulobacter crescentus NA1000 Δfur 0.21 CCNA_00392 dihydroorotase 0.51 CCNA_01659 queuine tRNA-ribosyltransferase low > 67
Dyella japonica UNC79MFTsu3.2 0.20 ABZR86_RS08760 dihydroorotase 0.66 ABZR86_RS09540 tRNA guanosine(34) transglycosylase Tgt
Fusobacterium nucleatum SB010 0.19 HUW76_08760 dihydroorotase 0.51 HUW76_09025 tRNA guanosine(34) transglycosylase Tgt low > 35
Brevundimonas sp. GW460-12-10-14-LB2 0.19 A4249_RS09470 dihydroorotase 0.51 A4249_RS02905 tRNA guanosine(34) transglycosylase Tgt
Bacteroides stercoris CC31F 0.19 HMPREF1181_RS04650 dihydroorotase 0.46 HMPREF1181_RS14345 tRNA guanosine(34) transglycosylase Tgt low > 56
Synechococcus elongatus PCC 7942 0.19 Synpcc7942_0488 dihydroorotase 0.45 Synpcc7942_0455 tgt queuine tRNA-ribosyltransferase
Pontibacter actiniarum KMM 6156, DSM 19842 0.19 CA264_14740 dihydroorotase 0.46 CA264_00655 tRNA-guanine(34) transglycosylase low > 74
Bacteroides thetaiotaomicron VPI-5482 0.18 BT0250 dihydroorotase (DHOase) (NCBI ptt file) 0.44 BT0835 tRNA-guanine transglycosylase (NCBI ptt file)
Bacteroides ovatus ATCC 8483 0.18 BACOVA_00399 amidohydrolase family protein 0.44 BACOVA_02570 tRNA-guanine transglycosylase
Mucilaginibacter yixingensis YX-36 DSM 26809 0.17 ABZR88_RS09205 dihydroorotase 0.47 ABZR88_RS13980 tRNA guanosine(34) transglycosylase Tgt
Phocaeicola dorei CL03T12C01 0.17 ABI39_RS11365 dihydroorotase 0.45 ABI39_RS16515 tRNA guanosine(34) transglycosylase Tgt
Parabacteroides merdae CL09T00C40 0.17 HMPREF1078_RS00745 dihydroorotase 0.48 HMPREF1078_RS01080 tRNA guanosine(34) transglycosylase Tgt
Pedobacter sp. GW460-11-11-14-LB5 0.17 CA265_RS03390 dihydroorotase 0.46 CA265_RS13030 tRNA guanosine(34) transglycosylase Tgt
Xanthomonas campestris pv. campestris strain 8004 0.17 Xcc-8004.2303.1 Dihydroorotase (EC 3.5.2.3) 0.65 Xcc-8004.2168.1 tRNA-guanine transglycosylase (EC 2.4.2.29)
Lysobacter sp. OAE881 0.16 ABIE51_RS13460 dihydroorotase 0.65 ABIE51_RS15020 tRNA guanosine(34) transglycosylase Tgt
Phocaeicola vulgatus CL09T03C04 0.16 HMPREF1058_RS15395 dihydroorotase 0.45 HMPREF1058_RS01215 tRNA guanosine(34) transglycosylase Tgt low > 67
Echinicola vietnamensis KMM 6221, DSM 17526 0.16 Echvi_0748 dihydroorotase, multifunctional complex type 0.47 Echvi_2049 tRNA-guanine transglycosylase, queuosine-34-forming
Ralstonia solanacearum PSI07 0.16 RPSI07_RS20630 dihydroorotase 0.61 RPSI07_RS11615 tRNA guanosine(34) transglycosylase Tgt
Ralstonia solanacearum IBSBF1503 0.15 RALBFv3_RS12630 dihydroorotase 0.62 RALBFv3_RS05685 tRNA guanosine(34) transglycosylase Tgt
Ralstonia solanacearum GMI1000 0.15 RS_RS03415 dihydroorotase 0.62 RS_RS13575 tRNA guanosine(34) transglycosylase Tgt
Ralstonia solanacearum UW163 0.15 UW163_RS00935 dihydroorotase 0.62 UW163_RS07940 tRNA guanosine(34) transglycosylase Tgt
Ralstonia sp. UNC404CL21Col 0.15 ABZR87_RS08630 dihydroorotase 0.62 ABZR87_RS01280 tRNA guanosine(34) transglycosylase Tgt low > 80
Desulfovibrio vulgaris Miyazaki F 0.15 DvMF_1426 dihydroorotase, multifunctional complex type (RefSeq) 0.52 DvMF_2757 tgt queuine tRNA-ribosyltransferase (RefSeq) low > 51
Desulfovibrio vulgaris Hildenborough JW710 0.15 DVU2902 pyrC dihydroorotase (TIGR) 0.52 DVU0726 tgt queuine tRNA-ribosyltransferase (TIGR)
Herbaspirillum seropedicae SmR1 0.14 HSERO_RS02340 dihydroorotase 0.64 HSERO_RS06175 queuine tRNA-ribosyltransferase low > 78
Variovorax sp. OAS795 0.13 ABID97_RS24655 dihydroorotase 0.57 ABID97_RS01595 tRNA guanosine(34) transglycosylase Tgt low > 91
Pseudomonas sp. S08-1 0.12 OH686_10945 Dihydroorotase 0.74 OH686_17430 tRNA-guanine transglycosylase
Pseudomonas stutzeri RCH2 0.12 Psest_0290 dihydroorotase, multifunctional complex type 0.72 Psest_1242 tRNA-guanine transglycosylase, queuosine-34-forming
Pseudomonas syringae pv. syringae B728a 0.11 Psyr_0481 dihydroorotase 0.72 Psyr_1228 tRNA-guanine transglycosylase
Pseudomonas syringae pv. syringae B728a ΔmexB 0.11 Psyr_0481 dihydroorotase 0.72 Psyr_1228 tRNA-guanine transglycosylase
Marinobacter adhaerens HP15 0.11 HP15_3506 dihydroorotase, multifunctional complex type 0.72 HP15_1479 queuine tRNA-ribosyltransferase low > 73
Pseudomonas sp. RS175 0.11 PFR28_04238 Dihydroorotase-like protein 0.72 PFR28_00277 Queuine tRNA-ribosyltransferase
Dechlorosoma suillum PS 0.10 Dsui_0597 dihydroorotase, multifunctional complex type 0.68 Dsui_3323 tRNA-guanine transglycosylase, queuosine-34-forming
Acinetobacter radioresistens SK82 0.08 MPMX26_01100 Dihydroorotase-like protein 0.69 MPMX26_00438 Queuine tRNA-ribosyltransferase low > 36

Not shown: 1 genomes with orthologs for ECD_00462 only; 50 genomes with orthologs for ECD_00354 only