Conservation of cofitness between CSW01_05965 and CSW01_19420 in Vibrio cholerae E7946 ATCC 55056

52 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_05965 threonylcarbamoyl-AMP synthase 1.0 CSW01_19420 coniferyl aldehyde dehydrogenase 0.48 6
Dickeya dadantii 3937 0.75 DDA3937_RS10495 threonylcarbamoyl-AMP synthase 0.34 DDA3937_RS14550 coniferyl aldehyde dehydrogenase low > 74
Dickeya dianthicola 67-19 0.74 HGI48_RS10495 threonylcarbamoyl-AMP synthase 0.33 HGI48_RS14500 coniferyl aldehyde dehydrogenase low > 71
Dickeya dianthicola ME23 0.74 DZA65_RS10975 threonylcarbamoyl-AMP synthase 0.34 DZA65_RS15435 coniferyl aldehyde dehydrogenase low > 75
Alteromonas macleodii MIT1002 0.74 MIT1002_01432 t(6)A37 threonylcarbamoyladenosine biosynthesis protein RimN 0.28 MIT1002_00534 Aldehyde dehydrogenase low > 70
Pectobacterium carotovorum WPP14 0.73 HER17_RS10905 threonylcarbamoyl-AMP synthase 0.34 HER17_RS04160 coniferyl aldehyde dehydrogenase low > 75
Shewanella amazonensis SB2B 0.73 Sama_2127 Sua5/YciO/YrdC/YwlC family protein (RefSeq) 0.49 Sama_2855 coniferyl aldehyde dehydrogenase (RefSeq) low > 62
Shewanella sp. ANA-3 0.67 Shewana3_1522 translation factor SUA5 (RefSeq) 0.48 Shewana3_3251 aldehyde dehydrogenase (RefSeq) low > 73
Shewanella oneidensis MR-1 0.67 SO3016 Sua5/YciO/YrdC/YwlC family protein (NCBI ptt file) 0.49 SO3683 coniferyl aldehyde dehydrogenase (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.67 Shew_2249 Sua5/YciO/YrdC/YwlC family protein (RefSeq) 0.49 Shew_3103 aldehyde dehydrogenase (RefSeq) low > 60
Marinobacter adhaerens HP15 0.66 HP15_1188 Sua5/YciO/YrdC/YwlC family protein 0.43 HP15_3329 NAD-dependent aldehyde dehydrogenase low > 73
Pseudomonas stutzeri RCH2 0.66 Psest_1888 Sua5/YciO/YrdC/YwlC family protein 0.41 Psest_0247 NAD-dependent aldehyde dehydrogenases low > 67
Pseudomonas sp. S08-1 0.65 OH686_20800 tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 0.42 OH686_14170 Aldehyde dehydrogenase / Probable coniferyl aldehyde dehydrogenase low > 80
Pseudomonas sp. BP01 0.64 JOY50_RS01070 L-threonylcarbamoyladenylate synthase 0.42 JOY50_RS20785 coniferyl aldehyde dehydrogenase low > 84
Pseudomonas segetis P6 0.64 MPMX49_02912 putative protein YciO 0.43 MPMX49_04421 Coniferyl aldehyde dehydrogenase low > 75
Pseudomonas aeruginosa MRSN321 0.64 DY961_RS00920 L-threonylcarbamoyladenylate synthase 0.44 DY961_RS21800 coniferyl aldehyde dehydrogenase 0.18 85
Pseudomonas aeruginosa PA14 0.64 IKLFDK_16260 L-threonylcarbamoyladenylate synthase 0.44 IKLFDK_23600 putative coniferyl aldehyde dehydrogenase low > 98
Pseudomonas aeruginosa PUPa3 0.64 DQ20_RS40120 L-threonylcarbamoyladenylate synthase 0.44 DQ20_RS37495 coniferyl aldehyde dehydrogenase low > 101
Pseudomonas sp. RS175 0.63 PFR28_03318 putative protein YciO 0.42 PFR28_04266 Coniferyl aldehyde dehydrogenase low > 88
Pseudomonas putida KT2440 0.63 PP_4499 putative maturation enzyme 0.41 PP_5120 coniferyl aldehyde dehydrogenase low > 96
Kangiella aquimarina DSM 16071 0.63 B158DRAFT_2305 translation factor SUA5 0.41 B158DRAFT_0768 NAD-dependent aldehyde dehydrogenases low > 40
Pseudomonas fluorescens FW300-N2E3 0.63 AO353_18525 hypothetical protein 0.42 AO353_08290 coniferyl aldehyde dehydrogenase low > 101
Pseudomonas fluorescens FW300-N2C3 0.63 AO356_18500 hypothetical protein 0.42 AO356_13300 coniferyl aldehyde dehydrogenase low > 104
Pseudomonas fluorescens FW300-N2E2 0.63 Pf6N2E2_5626 Hypothetical YciO protein, TsaC/YrdC paralog 0.42 Pf6N2E2_4575 Coniferyl aldehyde dehydrogenase (EC 1.2.1.68) low > 103
Pseudomonas simiae WCS417 0.62 PS417_22270 hypothetical protein 0.43 PS417_26845 coniferyl aldehyde dehydrogenase low > 88
Pseudomonas sp. SVBP6 0.62 COO64_RS21750 L-threonylcarbamoyladenylate synthase 0.43 COO64_RS12865 coniferyl aldehyde dehydrogenase low > 93
Pseudomonas lactucae CFBP13502 0.62 GEMAOFIL_04591 putative protein YciO 0.44 GEMAOFIL_05506 Coniferyl aldehyde dehydrogenase low > 96
Pseudomonas fluorescens SBW25 0.62 PFLU_RS23910 threonylcarbamoyl-AMP synthase 0.43 PFLU_RS28490 coniferyl aldehyde dehydrogenase low > 109
Pseudomonas fluorescens SBW25-INTG 0.62 PFLU_RS23910 threonylcarbamoyl-AMP synthase 0.43 PFLU_RS28490 coniferyl aldehyde dehydrogenase low > 109
Pseudomonas fluorescens FW300-N1B4 0.62 Pf1N1B4_3552 Hypothetical YciO protein, TsaC/YrdC paralog 0.43 Pf1N1B4_2315 Aldehyde dehydrogenase (EC 1.2.1.3); Probable coniferyl aldehyde dehydrogenase (EC 1.2.1.68) low > 87
Pseudomonas sp. DMC3 0.62 GFF2400 putative protein YciO 0.42 GFF233 Coniferyl aldehyde dehydrogenase low > 89
Pseudomonas fluorescens GW456-L13 0.62 PfGW456L13_4404 Hypothetical YciO protein, TsaC/YrdC paralog 0.42 PfGW456L13_985 Aldehyde dehydrogenase (EC 1.2.1.3); Probable coniferyl aldehyde dehydrogenase (EC 1.2.1.68) low > 87
Pseudomonas syringae pv. syringae B728a ΔmexB 0.60 Psyr_3585 Sua5/YciO/YrdC/YwlC 0.36 Psyr_2579 Aldehyde dehydrogenase low > 86
Pseudomonas syringae pv. syringae B728a 0.60 Psyr_3585 Sua5/YciO/YrdC/YwlC 0.36 Psyr_2579 Aldehyde dehydrogenase low > 86
Herbaspirillum seropedicae SmR1 0.57 HSERO_RS16410 translation factor Sua5 0.34 HSERO_RS23860 coniferyl aldehyde dehydrogenase low > 78
Ralstonia sp. UNC404CL21Col 0.55 ABZR87_RS10525 L-threonylcarbamoyladenylate synthase 0.38 ABZR87_RS04755 coniferyl aldehyde dehydrogenase low > 80
Paraburkholderia sabiae LMG 24235 0.55 QEN71_RS05920 L-threonylcarbamoyladenylate synthase 0.36 QEN71_RS28765 coniferyl aldehyde dehydrogenase low > 153
Paraburkholderia bryophila 376MFSha3.1 0.54 H281DRAFT_00505 tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 0.36 H281DRAFT_05792 coniferyl-aldehyde dehydrogenase low > 103
Paraburkholderia graminis OAS925 0.54 ABIE53_002753 tRNA threonylcarbamoyl adenosine modification protein (Sua5/YciO/YrdC/YwlC family) 0.36 ABIE53_000069 acyl-CoA reductase-like NAD-dependent aldehyde dehydrogenase low > 113
Burkholderia phytofirmans PsJN 0.54 BPHYT_RS12635 translation factor Sua5 0.37 BPHYT_RS18745 coniferyl aldehyde dehydrogenase low > 109
Cupriavidus basilensis FW507-4G11 0.53 RR42_RS06230 hypothetical protein 0.38 RR42_RS01275 aldehyde dehydrogenase low > 128
Variovorax sp. SCN45 0.52 GFF5789 YciO protein, TsaC/YrdC paralog 0.37 GFF5850 Aldehyde dehydrogenase (EC 1.2.1.3); Probable coniferyl aldehyde dehydrogenase (EC 1.2.1.68) low > 127
Variovorax sp. OAS795 0.52 ABID97_RS22605 L-threonylcarbamoyladenylate synthase 0.35 ABID97_RS26110 coniferyl aldehyde dehydrogenase low > 91
Acinetobacter radioresistens SK82 0.52 MPMX26_02446 putative protein YciO 0.38 MPMX26_00376 Coniferyl aldehyde dehydrogenase low > 36
Acinetobacter baumannii LAC-4 0.52 RR41_RS15200 threonylcarbamoyl-AMP synthase 0.40 RR41_RS09745 coniferyl aldehyde dehydrogenase low > 55
Hydrogenophaga sp. GW460-11-11-14-LB1 0.52 GFF110 Hypothetical YciO protein, TsaC/YrdC paralog 0.31 GFF3943 Aldehyde dehydrogenase (EC 1.2.1.3); Probable coniferyl aldehyde dehydrogenase (EC 1.2.1.68) low > 90
Acidovorax sp. GW101-3H11 0.50 Ac3H11_1753 TsaC protein (YrdC domain) required for threonylcarbamoyladenosine t(6)A37 modification in tRNA 0.37 Ac3H11_1472 Aldehyde dehydrogenase (EC 1.2.1.3); Probable coniferyl aldehyde dehydrogenase (EC 1.2.1.68) low > 79
Cellulophaga baltica 18 0.42 M666_RS15410 L-threonylcarbamoyladenylate synthase 0.26 M666_RS14905 aldehyde dehydrogenase low > 67
Pontibacter actiniarum KMM 6156, DSM 19842 0.42 CA264_02115 threonylcarbamoyl-AMP synthase 0.28 CA264_09240 aldehyde dehydrogenase low > 74
Pedobacter sp. GW460-11-11-14-LB5 0.40 CA265_RS05100 threonylcarbamoyl-AMP synthase 0.34 CA265_RS21385 aldehyde dehydrogenase family protein low > 88
Echinicola vietnamensis KMM 6221, DSM 17526 0.40 Echvi_0371 Sua5/YciO/YrdC/YwlC family protein 0.28 Echvi_1497 NAD-dependent aldehyde dehydrogenases low > 79
Synechocystis sp000284455 PCC 6803 0.40 SGL_RS02660 L-threonylcarbamoyladenylate synthase 0.33 SGL_RS15360 aldehyde dehydrogenase family protein low > 52
Synechococcus elongatus PCC 7942 0.35 Synpcc7942_2350 translation factor SUA5 0.28 Synpcc7942_0489 aldA aldehyde dehydrogenase low > 38

Not shown: 40 genomes with orthologs for CSW01_05965 only; 15 genomes with orthologs for CSW01_19420 only