| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Vibrio cholerae E7946 ATCC 55056 | 1.0 | CSW01_05560 | | ABC transporter ATP-binding protein | 1.0 | CSW01_15330 | | glycine dehydrogenase (decarboxylating) | 0.47 | 17 |
| Dickeya dadantii 3937 | 0.79 | DDA3937_RS10390 | | ABC transporter ATP-binding protein | 0.58 | DDA3937_RS03255 | | aminomethyl-transferring glycine dehydrogenase | low | > 74 |
| Dickeya dianthicola 67-19 | 0.79 | HGI48_RS10395 | | ABC transporter ATP-binding protein | 0.58 | HGI48_RS03400 | | aminomethyl-transferring glycine dehydrogenase | low | > 71 |
| Dickeya dianthicola ME23 | 0.78 | DZA65_RS10875 | | ABC transporter ATP-binding protein | 0.58 | DZA65_RS03445 | | aminomethyl-transferring glycine dehydrogenase | low | > 75 |
| Pantoea agglomerans CFBP13505 P0401 | 0.78 | PagCFBP13516_RS09220 | oppD | ABC transporter ATP-binding protein | 0.59 | PagCFBP13516_RS04005 | gcvP | aminomethyl-transferring glycine dehydrogenase | low | > 80 |
| Pantoea sp. MT58 | 0.78 | IAI47_09085 | | ABC transporter ATP-binding protein | 0.59 | IAI47_03775 | | aminomethyl-transferring glycine dehydrogenase | 0.39 | 43 |
| Serratia liquefaciens MT49 | 0.78 | IAI46_14190 | | ABC transporter ATP-binding protein | 0.58 | IAI46_20850 | | aminomethyl-transferring glycine dehydrogenase | low | > 87 |
| Escherichia fergusonii Becca | 0.78 | EFB2_02679 | | Oligopeptide transport ATP-binding protein OppD | 0.59 | EFB2_00999 | | Glycine dehydrogenase (decarboxylating) | low | > 86 |
| Escherichia coli ECRC98 | 0.78 | JDDGAC_05930 | oppD | murein tripeptide/oligopeptide ABC transporter ATP-binding protein OppD | 0.59 | JDDGAC_23170 | gcvP | aminomethyl-transferring glycine dehydrogenase | low | > 87 |
| Escherichia coli ECRC100 | 0.78 | OKFHMN_28645 | oppD | murein tripeptide/oligopeptide ABC transporter ATP-binding protein OppD | 0.59 | OKFHMN_19530 | gcvP | aminomethyl-transferring glycine dehydrogenase | low | > 79 |
| Escherichia coli ECOR38 | 0.78 | HEPCGN_25110 | oppD | murein tripeptide/oligopeptide ABC transporter ATP-binding protein OppD | 0.59 | HEPCGN_18820 | gcvP | aminomethyl-transferring glycine dehydrogenase | 0.41 | 18 |
| Escherichia coli ECRC101 | 0.78 | MCAODC_21615 | oppD | murein tripeptide/oligopeptide ABC transporter ATP-binding protein OppD | 0.59 | MCAODC_10050 | gcvP | aminomethyl-transferring glycine dehydrogenase | low | > 87 |
| Escherichia coli Nissle 1917 | 0.78 | ECOLIN_RS07525 | | murein tripeptide/oligopeptide ABC transporter ATP-binding protein OppD | 0.59 | ECOLIN_RS16165 | | aminomethyl-transferring glycine dehydrogenase | — | — |
| Escherichia coli ECRC102 | 0.78 | NIAGMN_27590 | oppD | murein tripeptide/oligopeptide ABC transporter ATP-binding protein OppD | 0.59 | NIAGMN_17295 | gcvP | aminomethyl-transferring glycine dehydrogenase | low | > 80 |
| Escherichia coli ECRC99 | 0.78 | KEDOAH_25640 | oppD | murein tripeptide/oligopeptide ABC transporter ATP-binding protein OppD | 0.59 | KEDOAH_08610 | gcvP | aminomethyl-transferring glycine dehydrogenase | — | — |
| Pectobacterium carotovorum WPP14 | 0.77 | HER17_RS11005 | | ABC transporter ATP-binding protein | 0.58 | HER17_RS17995 | | aminomethyl-transferring glycine dehydrogenase | low | > 75 |
| Escherichia coli BL21 | 0.77 | ECD_01220 | | oligopeptide ABC transporter ATPase | 0.59 | ECD_02735 | | glycine decarboxylase, PLP-dependent, subunit P of glycine cleavage complex | low | > 61 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.77 | OHPLBJKB_02437 | | Oligopeptide transport ATP-binding protein OppD | 0.59 | OHPLBJKB_00812 | | Glycine dehydrogenase (decarboxylating) | low | > 74 |
| Escherichia coli ECOR27 | 0.77 | NOLOHH_20405 | oppD | murein tripeptide/oligopeptide ABC transporter ATP-binding protein OppD | 0.59 | NOLOHH_11445 | gcvP | aminomethyl-transferring glycine dehydrogenase | 0.21 | 20 |
| Escherichia coli ECRC62 | 0.77 | BNILDI_18550 | oppD | murein tripeptide/oligopeptide ABC transporter ATP-binding protein OppD | 0.59 | BNILDI_09980 | gcvP | aminomethyl-transferring glycine dehydrogenase | low | > 75 |
| Klebsiella pneumoniae MKP103 | 0.77 | KDGMDA_24460 | | ABC transporter ATP-binding protein | 0.59 | KDGMDA_04370 | | aminomethyl-transferring glycine dehydrogenase | low | > 94 |
| Enterobacter asburiae PDN3 | 0.77 | EX28DRAFT_0871 | | oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain | 0.59 | EX28DRAFT_2955 | | glycine dehydrogenase (decarboxylating) | low | > 76 |
| Klebsiella pneumoniae MRSN742743 | 0.77 | GJGHJB_01983 | dppD | ABC transporter ATP-binding protein | 0.59 | GJGHJB_00769 | gcvP | aminomethyl-transferring glycine dehydrogenase | low | > 83 |
| Enterobacter sp. TBS_079 | 0.77 | MPMX20_02584 | | Oligopeptide transport ATP-binding protein OppD | 0.59 | MPMX20_03762 | | Glycine dehydrogenase (decarboxylating) | low | > 85 |
| Klebsiella michiganensis M5al | 0.77 | BWI76_RS17225 | | oligopeptide ABC transporter ATP-binding protein OppD | 0.59 | BWI76_RS23870 | | Glycine dehydrogenase (aminomethyl-transferring) (EC 1.4.4.2) (from data) | 0.18 | 39 |
| Escherichia coli BW25113 | 0.77 | b1246 | oppD | oligopeptide transporter ATP-binding component (NCBI) | 0.59 | b2903 | gcvP | glycine dehydrogenase (NCBI) | low | > 76 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.76 | GFF2743 | | Oligopeptide transport ATP-binding protein OppD (TC 3.A.1.5.1) | 0.59 | GFF3003 | | Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) | low | > 78 |
| Erwinia tracheiphila HP pepo 2.2 | 0.76 | IJEDHG_22750 | oppD | ABC transporter ATP-binding protein | 0.58 | IJEDHG_03250 | gcvP | aminomethyl-transferring glycine dehydrogenase | low | > 61 |
| Erwinia tracheiphila SCR3 | 0.76 | LU632_RS12865 | | ABC transporter ATP-binding protein | 0.58 | LU632_RS05915 | gcvP | aminomethyl-transferring glycine dehydrogenase | low | > 73 |
| Rahnella sp. WP5 | 0.75 | EX31_RS10050 | | ABC transporter ATP-binding protein | 0.58 | EX31_RS21520 | | aminomethyl-transferring glycine dehydrogenase | 0.26 | 49 |
| Erwinia amylovora T8 | 0.75 | OLJFJH_13415 | | ABC transporter ATP-binding protein | 0.59 | OLJFJH_08785 | | aminomethyl-transferring glycine dehydrogenase | low | > 58 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.53 | H281DRAFT_03126 | | oligopeptide transport system ATP-binding protein | 0.58 | H281DRAFT_02409 | | glycine dehydrogenase | low | > 103 |
| Rhizobium sp. OAE497 | 0.53 | ABIE40_RS13580 | | ABC transporter ATP-binding protein | 0.54 | ABIE40_RS09950 | | aminomethyl-transferring glycine dehydrogenase | low | > 107 |
| Paraburkholderia sabiae LMG 24235 | 0.52 | QEN71_RS18345 | | ABC transporter ATP-binding protein | 0.57 | QEN71_RS29215 | | aminomethyl-transferring glycine dehydrogenase | low | > 153 |
| Burkholderia phytofirmans PsJN | 0.52 | BPHYT_RS22035 | | peptide ABC transporter ATP-binding protein | 0.58 | BPHYT_RS19330 | | glycine cleavage system P protein (EC 1.4.4.2) (from data) | — | — |
| Paraburkholderia graminis OAS925 | 0.51 | ABIE53_004172 | | oligopeptide transport system ATP-binding protein | 0.58 | ABIE53_000238 | | glycine dehydrogenase | low | > 113 |
| Variovorax sp. SCN45 | 0.48 | GFF6112 | | Oligopeptide ABC transporter, ATP-binding protein OppD (TC 3.A.1.5.1) | 0.56 | GFF6478 | | Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) | low | > 127 |
| Cupriavidus basilensis FW507-4G11 | 0.47 | RR42_RS11230 | | peptide ABC transporter ATP-binding protein | 0.56 | RR42_RS20070 | | glycine dehydrogenase | low | > 128 |
| Phaeobacter inhibens DSM 17395 | 0.47 | PGA1_262p00330 | | oligopeptide ABC transporter, ATP binding protein | 0.56 | PGA1_78p00310 | | glycine dehydrogenase | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.46 | RALBFv3_RS02360 | | ABC transporter ATP-binding protein | 0.57 | RALBFv3_RS08660 | | glycine dehydrogenase (aminomethyl-transferring) | low | > 76 |
| Ralstonia solanacearum UW163 | 0.46 | UW163_RS11365 | | ABC transporter ATP-binding protein | 0.57 | UW163_RS04950 | | glycine dehydrogenase (aminomethyl-transferring) | — | — |
| Ralstonia solanacearum GMI1000 | 0.46 | RS_RS09515 | | ABC transporter ATP-binding protein | 0.56 | RS_RS16510 | | glycine dehydrogenase | low | > 80 |
| Ralstonia solanacearum PSI07 | 0.46 | RPSI07_RS15010 | | ABC transporter ATP-binding protein | 0.57 | RPSI07_RS08575 | | glycine dehydrogenase (aminomethyl-transferring) | low | > 81 |
| Ralstonia sp. UNC404CL21Col | 0.45 | ABZR87_RS14290 | | ABC transporter ATP-binding protein | 0.56 | ABZR87_RS03935 | | aminomethyl-transferring glycine dehydrogenase | low | > 80 |
| Variovorax sp. OAS795 | 0.45 | ABID97_RS23785 | | ABC transporter ATP-binding protein | 0.56 | ABID97_RS19655 | | aminomethyl-transferring glycine dehydrogenase | low | > 91 |
| Pseudomonas sp. SVBP6 | 0.44 | COO64_RS04090 | | ABC transporter ATP-binding protein | 0.58 | COO64_RS00950 | gcvP | aminomethyl-transferring glycine dehydrogenase | low | > 91 |
| Pseudomonas putida KT2440 | 0.44 | PP_0879 | | dipeptide ABC transporter - putative ATP binding subunit | 0.58 | PP_5192 | | glycine dehydrogenase | low | > 96 |
| Rhodopseudomonas palustris CGA009 | 0.44 | TX73_003900 | | ABC transporter ATP-binding protein | 0.57 | TX73_019935 | | aminomethyl-transferring glycine dehydrogenase | low | > 86 |
| Pseudomonas fluorescens FW300-N2E3 | 0.43 | AO353_05405 | | peptide ABC transporter ATP-binding protein | 0.58 | AO353_08720 | | glycine dehydrogenase | low | > 101 |
| Pseudomonas sp. RS175 | 0.43 | PFR28_00125 | | Dipeptide transport ATP-binding protein DppD | 0.56 | PFR28_03383 | | Glycine dehydrogenase (decarboxylating) | low | > 88 |
| Pseudomonas syringae pv. syringae B728a | 0.43 | Psyr_4241 | | Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal | 0.56 | Psyr_1096 | | glycine dehydrogenase (decarboxylating) alpha subunit / glycine dehydrogenase (decarboxylating) beta subunit | low | > 86 |
| Pseudomonas sp. BP01 | 0.43 | JOY50_RS10950 | | ABC transporter ATP-binding protein | 0.59 | JOY50_RS22405 | gcvP | aminomethyl-transferring glycine dehydrogenase | low | > 84 |
| Pseudomonas fluorescens FW300-N1B4 | 0.43 | Pf1N1B4_1126 | | Dipeptide transport ATP-binding protein DppD (TC 3.A.1.5.2) | 0.59 | Pf1N1B4_2236 | | Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) | low | > 87 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.43 | Psyr_4241 | | Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal | 0.56 | Psyr_1096 | | glycine dehydrogenase (decarboxylating) alpha subunit / glycine dehydrogenase (decarboxylating) beta subunit | low | > 86 |
| Pseudomonas simiae WCS417 | 0.43 | PS417_04050 | | peptide ABC transporter ATP-binding protein | 0.57 | PS417_22360 | | Glycine dehydrogenase (aminomethyl-transferring) (EC 1.4.4.2) (from data) | 0.24 | 41 |
| Pseudomonas orientalis W4I3 | 0.43 | QF045_RS07045 | | ATP-binding cassette domain-containing protein | 0.57 | QF045_RS24485 | | aminomethyl-transferring glycine dehydrogenase | low | > 93 |
| Pseudomonas fluorescens SBW25-INTG | 0.43 | PFLU_RS04090 | | ABC transporter ATP-binding protein | 0.57 | PFLU_RS24000 | | aminomethyl-transferring glycine dehydrogenase | low | > 109 |
| Pseudomonas fluorescens FW300-N2C3 | 0.43 | AO356_07270 | | peptide ABC transporter ATP-binding protein | 0.56 | AO356_18170 | | glycine dehydrogenase | 0.22 | 56 |
| Pseudomonas fluorescens SBW25 | 0.43 | PFLU_RS04090 | | ABC transporter ATP-binding protein | 0.57 | PFLU_RS24000 | | aminomethyl-transferring glycine dehydrogenase | low | > 109 |
| Pseudomonas segetis P6 | 0.43 | ACVTMO_RS19270 | | ABC transporter ATP-binding protein | 0.59 | ACVTMO_RS22225 | gcvP | aminomethyl-transferring glycine dehydrogenase | low | > 75 |
| Pseudomonas lactucae CFBP13502 | 0.43 | GEMAOFIL_01014 | | Dipeptide transport ATP-binding protein DppD | 0.57 | GEMAOFIL_04608 | | Glycine dehydrogenase (decarboxylating) | low | > 96 |
| Pseudomonas fluorescens FW300-N2E2 | 0.43 | Pf6N2E2_3313 | | Dipeptide transport ATP-binding protein DppD (TC 3.A.1.5.2) | 0.56 | Pf6N2E2_5558 | | Glycine dehydrogenase (aminomethyl-transferring) (EC 1.4.4.2) (from data) | 0.25 | 11 |
| Pseudomonas sp. DMC3 | 0.43 | GFF5020 | | Dipeptide transport ATP-binding protein DppD | 0.58 | GFF308 | | Glycine dehydrogenase (decarboxylating) | low | > 89 |
| Pseudomonas protegens RBAN4 | 0.42 | FABNJH_04545 | dppD | DppD | 0.57 | FABNJH_30045 | gcvP | aminomethyl-transferring glycine dehydrogenase | — | — |
| Pseudomonas sp. S08-1 | 0.42 | OH686_08715 | | Dipeptide ABC transporter, ATP-binding protein DppD | 0.60 | OH686_11165 | | glycine dehydrogenase | low | > 80 |
| Pseudomonas fluorescens GW456-L13 | 0.42 | PfGW456L13_5057 | | Dipeptide transport ATP-binding protein DppD (TC 3.A.1.5.2) | 0.58 | PfGW456L13_904 | | Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) | low | > 87 |
| Pseudomonas aeruginosa PUPa3 | 0.41 | NPBIFN_04768 | dppD | Di/tripeptide transport ATP-binding protein DppD | 0.57 | NPBIFN_05537 | gcvP | aminomethyl-transferring glycine dehydrogenase | low | > 101 |
| Pseudomonas aeruginosa PA14 | 0.41 | IKLFDK_01555 | | Di/tripeptide transport ATP-binding protein DppD | 0.57 | IKLFDK_27405 | | aminomethyl-transferring glycine dehydrogenase | low | > 98 |
| Pseudomonas aeruginosa MRSN321 | 0.41 | PFGADD_04709 | dppD | Di/tripeptide transport ATP-binding protein DppD | 0.57 | PFGADD_05461 | gcvP | aminomethyl-transferring glycine dehydrogenase | low | > 99 |
| Castellaniella sp019104865 MT123 | 0.41 | ABCV34_RS11095 | | ABC transporter ATP-binding protein | 0.54 | ABCV34_RS08835 | | aminomethyl-transferring glycine dehydrogenase | low | > 48 |
Not shown: 10 genomes with orthologs for CSW01_05560 only; 34 genomes with orthologs for CSW01_15330 only