Conservation of cofitness between CSW01_00145 and CSW01_14815 in Vibrio cholerae E7946 ATCC 55056

61 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_00145 branched-chain-amino-acid transaminase 1.0 CSW01_14815 hypothetical protein 0.48 9
Pantoea agglomerans CFBP13505 P0401 0.75 PagCFBP13505_RS20935 branched-chain amino acid transaminase 0.63 PagCFBP13505_RS20005 hypothetical protein low > 74
Pantoea sp. MT58 0.75 IAI47_01030 branched-chain amino acid transaminase 0.63 IAI47_05460 DUF3820 family protein low > 76
Klebsiella pneumoniae MKP103 0.75 KDGMDA_09485 branched-chain amino acid transaminase 0.59 KDGMDA_27465 Putative quorum-sensing-regulated virulence factor low > 95
Serratia liquefaciens MT49 0.75 IAI46_24350 branched-chain-amino-acid transaminase 0.68 IAI46_18425 DUF3820 family protein low > 87
Pectobacterium carotovorum WPP14 0.75 HER17_RS01070 branched-chain amino acid transaminase 0.65 HER17_RS04050 DUF3820 family protein low > 75
Rahnella sp. WP5 0.75 EX31_RS15000 branched-chain amino acid transaminase 0.63 EX31_RS20155 DUF3820 family protein low > 89
Dickeya dadantii 3937 0.75 DDA3937_RS20160 branched-chain-amino-acid transaminase 0.63 DDA3937_RS17090 DUF3820 family protein low > 74
Dickeya dianthicola 67-19 0.74 HGI48_RS20300 branched-chain-amino-acid transaminase 0.61 HGI48_RS17140 DUF3820 family protein low > 71
Dickeya dianthicola ME23 0.74 DZA65_RS21340 branched-chain amino acid transaminase 0.61 DZA65_RS18225 hypothetical protein low > 75
Klebsiella michiganensis M5al 0.74 BWI76_RS00970 branched chain amino acid aminotransferase 0.59 BWI76_RS20620 negative regulator — —
Escherichia coli ECOR38 0.73 HEPCGN_13355 ilvE branched-chain-amino-acid transaminase 0.58 HEPCGN_21400 Putative quorum-sensing-regulated virulence factor low > 88
Escherichia coli ECRC62 0.73 BNILDI_04745 ilvE branched-chain-amino-acid transaminase 0.58 BNILDI_12765 ypeB Uncharacterized protein YpeB low > 75
Escherichia coli ECRC98 0.73 JDDGAC_18265 ilvE branched-chain-amino-acid transaminase 0.58 JDDGAC_26170 ypeB Uncharacterized protein YpeB low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.73 OHPLBJKB_04283 Branched-chain-amino-acid aminotransferase 0.58 OHPLBJKB_01313 hypothetical protein low > 74
Escherichia coli ECRC100 0.73 OKFHMN_14645 ilvE branched-chain-amino-acid transaminase 0.58 OKFHMN_22220 ypeB Uncharacterized protein YpeB low > 79
Escherichia coli Nissle 1917 0.73 ECOLIN_RS21660 branched-chain-amino-acid transaminase 0.57 ECOLIN_RS13850 DUF3820 family protein — —
Escherichia coli ECOR27 0.73 NOLOHH_06780 ilvE branched-chain-amino-acid transaminase 0.58 NOLOHH_13900 ypeB Uncharacterized protein YpeB low > 76
Escherichia coli BW25113 0.73 b3770 ilvE branched-chain amino acid aminotransferase (NCBI) 0.58 b4546 ypeB hypothetical protein (NCBI) low > 76
Escherichia coli ECRC99 0.73 KEDOAH_13505 ilvE branched-chain-amino-acid transaminase 0.58 KEDOAH_06000 ypeB Uncharacterized protein YpeB — —
Escherichia fergusonii Becca 0.73 EFB2_04866 Branched-chain-amino-acid aminotransferase 0.59 EFB2_01466 hypothetical protein low > 86
Escherichia coli ECRC101 0.73 MCAODC_05150 ilvE branched-chain-amino-acid transaminase 0.58 MCAODC_12750 ypeB Uncharacterized protein YpeB low > 87
Escherichia coli ECRC102 0.73 NIAGMN_12400 ilvE branched-chain-amino-acid transaminase 0.58 NIAGMN_19990 ypeB Uncharacterized protein YpeB low > 80
Erwinia amylovora T8 0.73 OLJFJH_06225 branched-chain-amino-acid transaminase 0.64 OLJFJH_10885 cytoplasmic protein low > 58
Enterobacter sp. TBS_079 0.73 MPMX20_04500 Branched-chain-amino-acid aminotransferase 0.61 MPMX20_03304 hypothetical protein low > 85
Escherichia coli BL21 0.73 ECD_03648 branched-chain amino acid aminotransferase 0.58 ECD_02310 DUF3820 family protein low > 61
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.73 GFF2902 Branched-chain amino acid aminotransferase (EC 2.6.1.42) 0.58 GFF2040 FIG074102: hypothetical protein low > 78
Enterobacter asburiae PDN3 0.72 EX28DRAFT_4442 branched-chain amino acid aminotransferase, group I 0.57 EX28DRAFT_0218 Uncharacterized protein conserved in bacteria low > 76
Shewanella loihica PV-4 0.67 Shew_0291 branched-chain amino acid aminotransferase (RefSeq) 0.55 Shew_1282 hypothetical protein (RefSeq) low > 60
Dyella japonica UNC79MFTsu3.2 0.57 ABZR86_RS15965 branched-chain amino acid transaminase 0.49 ABZR86_RS01730 DUF3820 family protein low > 74
Rhodanobacter denitrificans FW104-10B01 0.54 LRK54_RS10340 branched-chain amino acid transaminase 0.55 LRK54_RS08290 DUF3820 family protein low > 59
Rhodanobacter sp000427505 FW510-R12 0.54 LRK53_RS03115 branched-chain amino acid transaminase 0.55 LRK53_RS00240 DUF3820 family protein low > 59
Rhodanobacter sp. FW510-T8 0.54 OKGIIK_11840 ilvE branched-chain amino acid transaminase 0.53 OKGIIK_15025 Cytoplasmic protein low > 53
Rhodanobacter denitrificans MT42 0.54 LRK55_RS09980 branched-chain amino acid transaminase 0.55 LRK55_RS08045 DUF3820 family protein low > 63
Acidovorax sp. GW101-3H11 0.47 Ac3H11_3369 Branched-chain amino acid aminotransferase (EC 2.6.1.42) 0.49 Ac3H11_1029 Putative cytoplasmic protein low > 79
Ralstonia solanacearum PSI07 0.47 RPSI07_RS21175 branched-chain amino acid transaminase 0.47 RPSI07_RS08385 hypothetical protein low > 81
Dechlorosoma suillum PS 0.47 Dsui_3339 branched-chain amino acid aminotransferase, group I 0.46 Dsui_0949 hypothetical protein low > 51
Ralstonia solanacearum GMI1000 0.46 RS_RS02840 branched-chain amino acid transaminase 0.48 RS_RS16700 hypothetical protein 0.57 14
Ralstonia solanacearum UW163 0.46 UW163_RS01455 branched-chain amino acid transaminase 0.48 UW163_RS04725 hypothetical protein — —
Pseudomonas segetis P6 0.46 MPMX49_04209 Branched-chain-amino-acid aminotransferase 0.48 MPMX49_02297 hypothetical protein low > 75
Ralstonia solanacearum IBSBF1503 0.46 RALBFv3_RS12155 branched-chain amino acid transaminase 0.48 RALBFv3_RS08885 hypothetical protein low > 76
Pseudomonas aeruginosa MRSN321 0.45 DY961_RS10870 ilvE;go_function=branched-chain-amino-acid branched-chain-amino-acid transaminase 0.68 DY961_RS14920 DUF3820 family protein low > 100
Hydrogenophaga sp. GW460-11-11-14-LB1 0.45 GFF1835 Branched-chain amino acid aminotransferase (EC 2.6.1.42) 0.50 GFF4965 Putative cytoplasmic protein low > 90
Pseudomonas aeruginosa PUPa3 0.45 DQ20_RS51190 ilvE;go_function=branched-chain-amino-acid branched-chain-amino-acid transaminase 0.68 DQ20_RS42210 DUF3820 family protein low > 101
Pseudomonas aeruginosa PA14 0.45 IKLFDK_28470 branched-chain-amino-acid transaminase 0.68 IKLFDK_18440 Putative quorum-sensing-regulated virulence factor low > 98
Pseudomonas sp. S08-1 0.45 OH686_09695 branched-chain amino acid aminotransferase 0.49 OH686_18670 Uncharacterized protein YpeB low > 80
Pseudomonas stutzeri RCH2 0.45 Psest_0450 Branched-chain amino acid aminotransferase (EC 2.6.1.42) (from data) 0.47 Psest_1458 Uncharacterized protein conserved in bacteria low > 67
Paraburkholderia bryophila 376MFSha3.1 0.45 H281DRAFT_04193 branched chain amino acid aminotransferase apoenzyme 0.50 H281DRAFT_00769 hypothetical protein low > 103
Paraburkholderia graminis OAS925 0.45 ABIE53_003432 branched-chain amino acid aminotransferase 0.50 ABIE53_001981 uncharacterized protein (DUF3820 family) low > 113
Paraburkholderia sabiae LMG 24235 0.45 QEN71_RS02410 branched-chain amino acid transaminase 0.48 QEN71_RS22640 DUF3820 family protein low > 153
Burkholderia phytofirmans PsJN 0.44 BPHYT_RS16285 Branched-chain amino acid aminotransferase (EC 2.6.1.42) (from data) 0.51 BPHYT_RS08730 hypothetical protein low > 109
Methylophilus sp. DMC18 0.44 GFF2600 Branched-chain-amino-acid aminotransferase 0.53 GFF268 hypothetical protein — —
Variovorax sp. SCN45 0.43 GFF5079 Branched-chain amino acid aminotransferase (EC 2.6.1.42) 0.50 GFF5018 Uncharacterized protein YpeB low > 127
Variovorax sp. OAS795 0.43 ABID97_RS03790 branched-chain amino acid transaminase 0.49 ABID97_RS04120 DUF3820 family protein low > 91
Pedobacter sp. GW460-11-11-14-LB5 0.27 CA265_RS15785 branched-chain-amino-acid transaminase 0.52 CA265_RS21080 hypothetical protein low > 88
Ralstonia sp. UNC404CL21Col 0.22 ABZR87_RS18540 branched-chain amino acid aminotransferase 0.49 ABZR87_RS04155 DUF3820 family protein low > 80
Cupriavidus basilensis FW507-4G11 0.19 RR42_RS25890 Branched-chain amino acid aminotransferase (EC 2.6.1.42) (from data) 0.47 RR42_RS27745 hypothetical protein low > 128
Pseudomonas sp. BP01 0.16 JOY50_RS06005 branched-chain amino acid aminotransferase 0.50 JOY50_RS19300 DUF3820 family protein — —
Pseudomonas sp. SVBP6 0.16 COO64_RS09990 branched-chain amino acid aminotransferase 0.49 COO64_RS11290 DUF3820 family protein low > 93
Shewanella oneidensis MR-1 0.15 SO0340 ilvE branched-chain amino acid aminotransferase (NCBI ptt file) 0.57 SO3326 conserved hypothetical protein (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.15 Shewana3_3830 branched-chain amino acid aminotransferase (RefSeq) 0.56 Shewana3_1217 hypothetical protein (RefSeq) low > 73
Alteromonas macleodii MIT1002 0.15 MIT1002_00377 Branched-chain-amino-acid aminotransferase 2 0.57 MIT1002_01393 hypothetical protein low > 70

Not shown: 58 genomes with orthologs for CSW01_00145 only; 1 genomes with orthologs for CSW01_14815 only