| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Vibrio cholerae E7946 ATCC 55056 | 1.0 | CSW01_07160 | | spermidine/putrescine ABC transporter ATP-binding protein | 1.0 | CSW01_12335 | | outer membrane protein TolC | 0.58 | 4 |
| Escherichia fergusonii Becca | 0.75 | EFB2_02849 | | Spermidine/putrescine import ATP-binding protein PotA | 0.42 | EFB2_00773 | | Outer membrane protein TolC | low | > 86 |
| Escherichia coli ECRC100 | 0.75 | OKFHMN_00625 | potA | spermidine/putrescine ABC transporter ATP-binding protein PotA | 0.42 | OKFHMN_18805 | tolC | outer membrane channel protein TolC | low | > 80 |
| Escherichia coli ECRC98 | 0.75 | JDDGAC_06740 | potA | spermidine/putrescine ABC transporter ATP-binding protein PotA | 0.42 | JDDGAC_22440 | tolC | outer membrane channel protein TolC | low | > 86 |
| Escherichia coli ECRC101 | 0.75 | MCAODC_22460 | potA | spermidine/putrescine ABC transporter ATP-binding protein PotA | 0.42 | MCAODC_09320 | tolC | outer membrane channel protein TolC | low | > 87 |
| Escherichia coli ECRC102 | 0.75 | NIAGMN_24750 | potA | spermidine/putrescine ABC transporter ATP-binding protein PotA | 0.42 | NIAGMN_16570 | tolC | outer membrane channel protein TolC | — | — |
| Escherichia coli BW25113 | 0.75 | b1126 | potA | putrescine/spermidine ABC transporter ATPase protein (NCBI) | 0.42 | b3035 | tolC | outer membrane channel; specific tolerance to colicin E1; segregation of daughter chromosomes (VIMSS) | 0.24 | 56 |
| Escherichia coli ECRC62 | 0.75 | BNILDI_19100 | potA | spermidine/putrescine ABC transporter ATP-binding protein PotA | 0.42 | BNILDI_00905 | tolC | outer membrane channel protein TolC | low | > 75 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.75 | OHPLBJKB_02542 | | Spermidine/putrescine import ATP-binding protein PotA | 0.42 | OHPLBJKB_00668 | | Outer membrane protein TolC | low | > 73 |
| Escherichia coli ECOR27 | 0.75 | NOLOHH_20935 | potA | spermidine/putrescine ABC transporter ATP-binding protein PotA | 0.42 | NOLOHH_10610 | tolC | outer membrane channel protein TolC | low | > 75 |
| Escherichia coli ECOR38 | 0.75 | HEPCGN_24075 | potA | spermidine/putrescine ABC transporter ATP-binding protein PotA | 0.42 | HEPCGN_17680 | tolC | outer membrane channel protein TolC | low | > 87 |
| Escherichia coli BL21 | 0.75 | ECD_01124 | | spermidine/putrescine ABC transporter ATPase | 0.42 | ECD_02907 | | transport channel | low | > 61 |
| Escherichia coli ECRC99 | 0.75 | KEDOAH_24710 | potA | spermidine/putrescine ABC transporter ATP-binding protein PotA | 0.42 | KEDOAH_09340 | tolC | outer membrane channel protein TolC | — | — |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.75 | GFF3410 | | Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1) | 0.43 | GFF3149 | | Type I secretion outer membrane protein, TolC precursor | low | > 78 |
| Escherichia coli Nissle 1917 | 0.75 | ECOLIN_RS06485 | | spermidine/putrescine ABC transporter ATP-binding protein PotA | 0.42 | ECOLIN_RS17515 | | outer membrane channel protein TolC | low | > 55 |
| Klebsiella michiganensis M5al | 0.74 | BWI76_RS11255 | | putrescine/spermidine ABC transporter ATP-binding protein | 0.43 | BWI76_RS24400 | | outer membrane channel protein TolC | low | > 92 |
| Enterobacter sp. TBS_079 | 0.72 | MPMX20_01807 | | Spermidine/putrescine import ATP-binding protein PotA | 0.43 | MPMX20_03882 | | Outer membrane protein TolC | low | > 85 |
| Enterobacter asburiae PDN3 | 0.72 | EX28DRAFT_1804 | | spermidine/putrescine ABC transporter ATP-binding subunit | 0.43 | EX28DRAFT_3073 | | type I secretion outer membrane protein, TolC family | low | > 76 |
| Pectobacterium carotovorum WPP14 | 0.72 | HER17_RS11660 | | spermidine/putrescine ABC transporter ATP-binding protein PotA | 0.43 | HER17_RS19825 | | outer membrane channel protein TolC | low | > 75 |
| Marinobacter adhaerens HP15 | 0.55 | HP15_4062 | | spermidine/putrescine ABC transporter, ATP-binding protein | 0.26 | HP15_451 | | type I secretion outer membrane protein, TolC family | — | — |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.55 | DVU0098 | potA | polyamine ABC transporter, ATP-binding protein (TIGR) | 0.10 | DVU3097 | | outer membrane efflux protein (TIGR) | low | > 55 |
| Desulfovibrio vulgaris Miyazaki F | 0.52 | DvMF_1960 | potA | putrescine/spermidine ABC transporter ATPase protein (RefSeq) | 0.06 | DvMF_2365 | | outer membrane efflux protein (RefSeq) | low | > 51 |
| Pseudomonas aeruginosa PA14 | 0.40 | IKLFDK_18415 | | Spermidine/putrescine import ATP-binding protein PotA | 0.29 | IKLFDK_28670 | | efflux transporter outer membrane subunit OpmH | low | > 101 |
| Caulobacter crescentus NA1000 Δfur | 0.39 | CCNA_03235 | | spermidine/putrescine transport ATP-binding protein potA | 0.12 | CCNA_01379 | | type I secretion outer membrane protein rsaFb | low | > 67 |
| Caulobacter crescentus NA1000 | 0.39 | CCNA_03235 | | spermidine/putrescine transport ATP-binding protein potA | 0.12 | CCNA_01379 | | type I secretion outer membrane protein rsaFb | low | > 66 |
| Serratia liquefaciens MT49 | 0.38 | IAI46_08375 | | putrescine ABC transporter ATP-binding subunit PotG | 0.42 | IAI46_21945 | | outer membrane channel protein TolC | low | > 86 |
| Pseudomonas fluorescens FW300-N2E3 | 0.38 | AO353_04275 | | polyamine ABC transporter ATP-binding protein | 0.28 | AO353_13005 | | channel protein TolC | low | > 101 |
| Pseudomonas fluorescens GW456-L13 | 0.38 | PfGW456L13_4763 | | Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1) | 0.27 | PfGW456L13_188 | | Type I secretion outer membrane protein, TolC precursor | low | > 87 |
| Pseudomonas fluorescens FW300-N1B4 | 0.38 | Pf1N1B4_3027 | | Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1) | 0.28 | Pf1N1B4_1448 | | Type I secretion outer membrane protein, TolC precursor | low | > 87 |
| Pseudomonas sp. S08-1 | 0.38 | OH686_06910 | | ABC transporter ATP-binding protein YdcT | 0.28 | OH686_15890 | | Outer membrane channel TolC (OpmH) | low | > 80 |
| Pseudomonas simiae WCS417 | 0.38 | PS417_05935 | | polyamine ABC transporter ATP-binding protein | 0.28 | PS417_02350 | | channel protein TolC | low | > 88 |
| Rahnella sp. WP5 | 0.38 | EX31_RS09625 | | putrescine ABC transporter ATP-binding subunit PotG | 0.42 | EX31_RS08100 | | outer membrane channel protein TolC | low | > 89 |
| Pseudomonas fluorescens SBW25-INTG | 0.38 | PFLU_RS05995 | | ABC transporter ATP-binding protein | 0.28 | PFLU_RS02425 | | TolC family outer membrane protein | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.38 | PFLU_RS05995 | | ABC transporter ATP-binding protein | 0.28 | PFLU_RS02425 | | TolC family outer membrane protein | low | > 109 |
| Pseudomonas sp. SVBP6 | 0.38 | COO64_RS05020 | | ABC transporter ATP-binding protein | 0.27 | COO64_RS17750 | | TolC family outer membrane protein | low | > 93 |
| Ralstonia sp. UNC404CL21Col | 0.37 | ABZR87_RS22460 | | ABC transporter ATP-binding protein | 0.22 | ABZR87_RS08765 | | TolC family outer membrane protein | low | > 80 |
| Pseudomonas sp. RS175 | 0.37 | PFR28_00346 | | Spermidine/putrescine import ATP-binding protein PotA | 0.28 | PFR28_05090 | | Outer membrane protein TolC | low | > 88 |
| Pseudomonas sp. BP01 | 0.37 | JOY50_RS11770 | | ABC transporter ATP-binding protein | 0.28 | JOY50_RS10060 | | TolC family outer membrane protein | low | > 84 |
| Pseudomonas putida KT2440 | 0.37 | PP_1484 | | predicted polyamine ABC transporter, ATP-binding protein | 0.28 | PP_4923 | | Outer membrane efflux protein | low | > 96 |
| Pseudomonas fluorescens FW300-N2C3 | 0.37 | AO356_06300 | | polyamine ABC transporter ATP-binding protein | 0.29 | AO356_08815 | | channel protein TolC | low | > 104 |
| Pseudomonas syringae pv. syringae B728a | 0.37 | Psyr_4615 | | Spermidine/putrescine ABC transporter ATP-binding subunit | 0.29 | Psyr_0543 | | Type I secretion outer membrane protein, TolC | low | > 86 |
| Shewanella loihica PV-4 | 0.37 | Shew_0974 | | spermidine/putrescine ABC transporter ATPase subunit (RefSeq) | 0.45 | Shew_0544 | tolC | outer membrane channel protein (RefSeq) | low | > 60 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.37 | Psyr_4615 | | Spermidine/putrescine ABC transporter ATP-binding subunit | 0.29 | Psyr_0543 | | Type I secretion outer membrane protein, TolC | low | > 86 |
| Erwinia amylovora T8 | 0.37 | OLJFJH_16305 | | putrescine ABC transporter ATP-binding subunit PotG | 0.41 | OLJFJH_07675 | | outer membrane channel protein TolC | low | > 58 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.36 | GFF282 | | Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1) | 0.24 | GFF5765 | | Type I secretion outer membrane protein, TolC precursor | low | > 90 |
| Pantoea sp. MT58 | 0.36 | IAI47_13040 | | putrescine ABC transporter ATP-binding subunit PotG | 0.43 | IAI47_03135 | | outer membrane channel protein TolC | low | > 76 |
| Shewanella oneidensis MR-1 | 0.36 | SO1271 | | polyamine ABC transporter, ATP-binding protein (NCBI ptt file) | 0.47 | SO3904 | tolC | outer membrane protein TolC (NCBI ptt file) | low | > 76 |
| Dickeya dadantii 3937 | 0.36 | DDA3937_RS09465 | | putrescine ABC transporter ATP-binding subunit PotG | 0.42 | DDA3937_RS01740 | | outer membrane channel protein TolC | low | > 74 |
| Pseudomonas sp. DMC3 | 0.36 | GFF285 | | Spermidine/putrescine import ATP-binding protein PotA | 0.26 | GFF3182 | | Outer membrane protein TolC | low | > 89 |
| Shewanella sp. ANA-3 | 0.36 | Shewana3_3096 | | spermidine/putrescine ABC transporter ATPase subunit (RefSeq) | 0.47 | Shewana3_0725 | tolC | outer membrane channel protein (RefSeq) | low | > 73 |
| Acidovorax sp. GW101-3H11 | 0.36 | Ac3H11_4180 | | Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1) | 0.24 | Ac3H11_2219 | | Type I secretion outer membrane protein, TolC precursor | low | > 79 |
| Variovorax sp. SCN45 | 0.36 | GFF5594 | | Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1) | 0.24 | GFF6530 | | Type I secretion outer membrane protein, TolC family | low | > 127 |
| Dickeya dianthicola 67-19 | 0.36 | HGI48_RS09485 | | putrescine ABC transporter ATP-binding subunit PotG | 0.42 | HGI48_RS01635 | | outer membrane channel protein TolC | low | > 71 |
| Dickeya dianthicola ME23 | 0.36 | DZA65_RS09795 | | putrescine ABC transporter ATP-binding subunit PotG | 0.42 | DZA65_RS01710 | | outer membrane channel protein TolC | low | > 75 |
| Pseudomonas stutzeri RCH2 | 0.36 | Psest_4282 | | spermidine/putrescine ABC transporter ATP-binding subunit | 0.29 | Psest_0476 | | type I secretion outer membrane protein, TolC family | low | > 67 |
| Shewanella amazonensis SB2B | 0.35 | Sama_2641 | | polyamine ABC transporter, ATP-binding protein (RefSeq) | 0.44 | Sama_3048 | tolC | outer membrane channel protein (RefSeq) | low | > 62 |
| Ralstonia solanacearum IBSBF1503 | 0.33 | RALBFv3_RS01235 | | ABC transporter ATP-binding protein | 0.22 | RALBFv3_RS12715 | | channel protein TolC | — | — |
| Ralstonia solanacearum UW163 | 0.33 | UW163_RS14545 | | ABC transporter ATP-binding protein | 0.22 | UW163_RS00850 | | channel protein TolC | — | — |
Not shown: 17 genomes with orthologs for CSW01_07160 only; 25 genomes with orthologs for CSW01_12335 only