Conservation of cofitness between CSW01_06415 and CSW01_11925 in Vibrio cholerae E7946 ATCC 55056

63 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_06415 MBL fold metallo-hydrolase 1.0 CSW01_11925 TatD family deoxyribonuclease 0.49 15
Marinobacter adhaerens HP15 0.62 HP15_1191 metallo-beta-lactamase family protein 0.36 HP15_542 TatD-related deoxyribonuclease low > 73
Shewanella oneidensis MR-1 0.61 SO3054 metallo-beta-lactamase family protein (NCBI ptt file) 0.29 SO1213 hydrolase, TatD family (NCBI ptt file) low > 76
Klebsiella pneumoniae MKP103 0.61 KDGMDA_18065 Hydroxyacylglutathione hydrolase GloC 0.41 KDGMDA_12390 metal-dependent hydrolase low > 95
Shewanella sp. ANA-3 0.61 Shewana3_1493 beta-lactamase domain-containing protein (RefSeq) 0.29 Shewana3_1038 TatD-related deoxyribonuclease (RefSeq) low > 73
Escherichia coli ECOR38 0.60 HEPCGN_23135 gloC hydroxyacylglutathione hydrolase GloC 0.41 HEPCGN_09265 tatD metal-dependent hydrolase low > 88
Hydrogenophaga sp. GW460-11-11-14-LB1 0.60 GFF1871 Hypothetical metal-binding enzyme, YcbL homolog 0.26 GFF744 Putative deoxyribonuclease YjjV low > 90
Klebsiella michiganensis M5al 0.60 BWI76_RS09865 MBL fold hydrolase 0.41 BWI76_RS04120 metal-dependent hydrolase low > 92
Escherichia coli ECRC98 0.59 JDDGAC_09000 gloC hydroxyacylglutathione hydrolase GloC 0.41 JDDGAC_14855 yjjV metal-dependent hydrolase low > 87
Escherichia coli ECRC99 0.59 KEDOAH_22345 gloC hydroxyacylglutathione hydrolase GloC 0.41 KEDOAH_16885 yjjV metal-dependent hydrolase
Escherichia coli ECRC100 0.59 OKFHMN_05390 gloC hydroxyacylglutathione hydrolase GloC 0.41 OKFHMN_11260 yjjV metal-dependent hydrolase low > 79
Escherichia coli Nissle 1917 0.59 ECOLIN_RS04905 hydroxyacylglutathione hydrolase GloC 0.41 ECOLIN_RS25130 metal-dependent hydrolase low > 55
Escherichia coli ECRC101 0.59 MCAODC_24780 gloC hydroxyacylglutathione hydrolase GloC 0.41 MCAODC_01775 yjjV metal-dependent hydrolase low > 88
Escherichia coli ECRC102 0.59 NIAGMN_03110 gloC hydroxyacylglutathione hydrolase GloC 0.41 NIAGMN_09110 yjjV metal-dependent hydrolase low > 80
Escherichia fergusonii Becca 0.59 EFB2_03137 Hydroxyacylglutathione hydrolase GloC 0.41 EFB2_04068 putative metal-dependent hydrolase YjjV low > 86
Escherichia coli ECOR27 0.59 NOLOHH_21950 gloC hydroxyacylglutathione hydrolase GloC 0.41 NOLOHH_03580 yjjV metal-dependent hydrolase low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.59 OHPLBJKB_02740 Hydroxyacylglutathione hydrolase GloC 0.41 OHPLBJKB_03683 putative metal-dependent hydrolase YjjV low > 74
Escherichia coli ECRC62 0.59 BNILDI_20205 gloC hydroxyacylglutathione hydrolase GloC 0.42 BNILDI_08020 tatD metal-dependent hydrolase low > 75
Enterobacter sp. TBS_079 0.59 MPMX20_01585 Hydroxyacylglutathione hydrolase GloC 0.42 MPMX20_00677 putative metal-dependent hydrolase YjjV low > 85
Escherichia coli BL21 0.59 ECD_00931 putative metal-binding enzyme 0.41 ECD_04254 putative DNase low > 61
Escherichia coli BW25113 0.59 b0927 ycbL predicted metal-binding enzyme (NCBI) 0.41 b4378 yjjV predicted DNase (NCBI) low > 76
Pectobacterium carotovorum WPP14 0.59 HER17_RS12035 MBL fold metallo-hydrolase 0.40 HER17_RS19045 TatD family hydrolase low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.59 GFF3684 Hypothetical metal-binding enzyme, YcbL homolog 0.41 GFF1040 Putative deoxyribonuclease YjjV low > 78
Enterobacter asburiae PDN3 0.59 EX28DRAFT_2009 Zn-dependent hydrolases, including glyoxylases 0.42 EX28DRAFT_3587 Mg-dependent DNase
Serratia liquefaciens MT49 0.58 IAI46_08745 MBL fold metallo-hydrolase 0.38 IAI46_02900 TatD family hydrolase low > 86
Dickeya dianthicola 67-19 0.58 HGI48_RS12995 MBL fold metallo-hydrolase 0.40 HGI48_RS02415 TatD family hydrolase low > 71
Dickeya dadantii 3937 0.58 DDA3937_RS12920 MBL fold metallo-hydrolase 0.41 DDA3937_RS02460 TatD family hydrolase low > 74
Paraburkholderia graminis OAS925 0.57 ABIE53_000468 hydroxyacylglutathione hydrolase 0.27 ABIE53_002767 TatD DNase family protein low > 113
Erwinia amylovora T8 0.57 OLJFJH_16050 Hydroxyacylglutathione hydrolase GloC 0.38 OLJFJH_01630 metal-dependent hydrolase low > 58
Dickeya dianthicola ME23 0.57 DZA65_RS13455 MBL fold metallo-hydrolase 0.40 DZA65_RS02520 metal-dependent hydrolase low > 75
Paraburkholderia bryophila 376MFSha3.1 0.57 H281DRAFT_02154 Glyoxylase, beta-lactamase superfamily II 0.27 H281DRAFT_00492 TatD DNase family protein low > 103
Erwinia tracheiphila SCR3 0.56 LU632_RS09895 MBL fold metallo-hydrolase 0.38 LU632_RS02510 TatD family hydrolase low > 74
Pantoea sp. MT58 0.56 IAI47_12770 MBL fold metallo-hydrolase 0.39 IAI47_03395 metal-dependent hydrolase low > 76
Erwinia tracheiphila HP pepo 2.2 0.56 IJEDHG_20400 Hydroxyacylglutathione hydrolase GloC 0.37 IJEDHG_06420 metal-dependent hydrolase low > 61
Paraburkholderia sabiae LMG 24235 0.56 QEN71_RS00645 MBL fold metallo-hydrolase 0.26 QEN71_RS05855 TatD family hydrolase low > 153
Pantoea agglomerans CFBP13505 P0401 0.55 PagCFBP13505_RS04560 MBL fold metallo-hydrolase 0.40 PagCFBP13505_RS16310 YchF/TatD family DNA exonuclease low > 74
Cupriavidus basilensis FW507-4G11 0.55 RR42_RS19750 MBL fold metallo-hydrolase 0.25 RR42_RS06110 DNAase
Burkholderia phytofirmans PsJN 0.55 BPHYT_RS01930 hypothetical protein 0.24 BPHYT_RS12705 DNAase low > 109
Shewanella amazonensis SB2B 0.55 Sama_2142 metallo-beta-lactamase family protein (RefSeq) 0.22 Sama_0970 TatD-related deoxyribonuclease (RefSeq) low > 62
Ralstonia solanacearum PSI07 0.54 RPSI07_RS08720 MBL fold metallo-hydrolase 0.24 RPSI07_RS18600 TatD family deoxyribonuclease
Rahnella sp. WP5 0.54 EX31_RS18150 MBL fold metallo-hydrolase 0.36 EX31_RS04070 deoxyribonuclease YjjV low > 89
Ralstonia solanacearum GMI1000 0.54 RS_RS16370 MBL fold metallo-hydrolase 0.24 RS_RS05570 TatD family deoxyribonuclease
Alteromonas macleodii MIT1002 0.54 MIT1002_03450 Beta-lactamase hydrolase-like protein 0.35 MIT1002_02710 putative deoxyribonuclease YjjV low > 70
Ralstonia sp. UNC404CL21Col 0.53 ABZR87_RS03825 MBL fold metallo-hydrolase 0.28 ABZR87_RS10420 TatD family hydrolase low > 80
Ralstonia solanacearum UW163 0.53 UW163_RS05105 MBL fold metallo-hydrolase 0.25 UW163_RS12230 TatD family deoxyribonuclease
Ralstonia solanacearum IBSBF1503 0.53 RALBFv3_RS08505 MBL fold metallo-hydrolase 0.25 RALBFv3_RS14760 TatD family deoxyribonuclease
Acidovorax sp. GW101-3H11 0.48 Ac3H11_3348 Hypothetical metal-binding enzyme, YcbL homolog 0.26 Ac3H11_1737 Putative deoxyribonuclease YjjV
Acinetobacter baumannii LAC-4 0.48 RR41_RS17080 MBL fold metallo-hydrolase 0.29 RR41_RS16185 TatD family hydrolase low > 55
Acinetobacter radioresistens SK82 0.47 MPMX26_00296 Hydroxyacylglutathione hydrolase GloC 0.29 MPMX26_00479 putative metal-dependent hydrolase YjjV low > 36
Pseudomonas fluorescens GW456-L13 0.34 PfGW456L13_1623 Hypothetical metal-binding enzyme, YcbL homolog 0.31 PfGW456L13_5078 Putative deoxyribonuclease YjjV low > 87
Pseudomonas fluorescens FW300-N1B4 0.33 Pf1N1B4_2963 Hypothetical metal-binding enzyme, YcbL homolog 0.32 Pf1N1B4_1148 Putative deoxyribonuclease YjjV low > 87
Pseudomonas stutzeri RCH2 0.33 Psest_3219 Zn-dependent hydrolases, including glyoxylases 0.32 Psest_0728 hydrolase, TatD family low > 67
Pseudomonas segetis P6 0.33 MPMX49_03689 Hydroxyacylglutathione hydrolase GloC 0.32 MPMX49_03895 putative metal-dependent hydrolase YjjV low > 75
Pseudomonas sp. DMC3 0.33 GFF4448 Hydroxyacylglutathione hydrolase GloC 0.31 GFF5001 putative metal-dependent hydrolase YjjV low > 89
Pseudomonas fluorescens FW300-N2E3 0.33 AO353_15160 MBL fold metallo-hydrolase 0.31 AO353_05495 hydrolase TatD low > 101
Pseudomonas sp. SVBP6 0.33 COO64_RS03445 MBL fold metallo-hydrolase 0.32 COO64_RS11265 TatD family hydrolase low > 93
Pseudomonas lactucae CFBP13502 0.33 GEMAOFIL_01115 Hydroxyacylglutathione hydrolase GloC 0.30 GEMAOFIL_00995 putative metal-dependent hydrolase YjjV low > 93
Pseudomonas aeruginosa PA14 0.33 IKLFDK_03655 MBL fold metallo-hydrolase 0.35 IKLFDK_18190 TatD family deoxyribonuclease low > 100
Pseudomonas fluorescens SBW25-INTG 0.32 PFLU_RS04625 MBL fold metallo-hydrolase 0.32 PFLU_RS04000 TatD family hydrolase low > 109
Pseudomonas fluorescens SBW25 0.32 PFLU_RS04625 MBL fold metallo-hydrolase 0.32 PFLU_RS04000 TatD family hydrolase low > 109
Pseudomonas simiae WCS417 0.32 PS417_04560 beta-lactamase 0.31 PS417_03955 hydrolase TatD low > 88
Pseudomonas sp. S08-1 0.31 OH686_06295 MBL-fold metallo-hydrolase superfamily 0.32 OH686_16550 Putative deoxyribonuclease YjjV low > 80
Pseudomonas putida KT2440 0.31 PP_0772 Metallo-beta-lactamase family protein 0.29 PP_0791 putative hydrolase low > 96
Pseudomonas sp. BP01 0.31 JOY50_RS19395 MBL fold metallo-hydrolase 0.32 JOY50_RS19325 TatD family hydrolase low > 84

Not shown: 31 genomes with orthologs for CSW01_06415 only; 18 genomes with orthologs for CSW01_11925 only