Conservation of cofitness between CSW01_18660 and CSW01_10520 in Vibrio cholerae E7946 ATCC 55056

59 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_18660 glycerate kinase 1.0 CSW01_10520 Aspartate-semialdehyde dehydrogenase 2 0.41 14
Serratia liquefaciens MT49 0.55 IAI46_05265 glycerate kinase 0.48 IAI46_17845 aspartate-semialdehyde dehydrogenase low > 86
Shewanella loihica PV-4 0.53 Shew_2534 glycerate kinase (RefSeq) 0.71 Shew_2308 aspartate-semialdehyde dehydrogenase (RefSeq) — —
Shewanella amazonensis SB2B 0.52 Sama_3228 glycerate kinase (RefSeq) 0.72 Sama_2152 aspartate-semialdehyde dehydrogenase (RefSeq) — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.51 GFF4840 Glycerate kinase (EC 2.7.1.31) 0.44 GFF1935 Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) low > 78
Escherichia fergusonii Becca 0.50 EFB2_03548 Glycerate 3-kinase 0.45 EFB2_01539 USG-1 protein low > 86
Enterobacter asburiae PDN3 0.50 EX28DRAFT_2867 glycerate kinase 0.42 EX28DRAFT_0285 Aspartate-semialdehyde dehydrogenase low > 76
Escherichia coli BL21 0.50 ECD_00464 glycerate kinase II 0.45 ECD_02244 putative semialdehyde dehydrogenase low > 61
Escherichia coli ECRC99 0.50 KEDOAH_20080 glxK glycerate 3-kinase 0.45 KEDOAH_05530 usg aspartate-semialdehyde dehydrogenase — —
Escherichia coli ECRC101 0.50 MCAODC_27105 glxK glycerate 3-kinase 0.45 MCAODC_13705 usg aspartate-semialdehyde dehydrogenase low > 87
Escherichia coli ECRC98 0.50 JDDGAC_11535 glxK glycerate 3-kinase 0.45 JDDGAC_26625 usg aspartate-semialdehyde dehydrogenase — —
Escherichia coli ECRC102 0.50 NIAGMN_05940 glxK glycerate 3-kinase 0.45 NIAGMN_20440 usg aspartate-semialdehyde dehydrogenase — —
Escherichia coli ECRC100 0.50 OKFHMN_07885 glxK glycerate 3-kinase 0.45 OKFHMN_22665 usg aspartate-semialdehyde dehydrogenase low > 80
Escherichia coli Nissle 1917 0.50 ECOLIN_RS02985 glycerate 3-kinase 0.45 ECOLIN_RS13440 aspartate-semialdehyde dehydrogenase low > 55
Escherichia coli HS(pFamp)R (ATCC 700891) 0.50 OHPLBJKB_03167 Glycerate 3-kinase 0.45 OHPLBJKB_01386 USG-1 protein low > 73
Escherichia coli ECOR38 0.50 HEPCGN_06530 glxK glycerate 3-kinase 0.45 HEPCGN_21870 usg aspartate-semialdehyde dehydrogenase low > 87
Escherichia coli BW25113 0.50 b0514 glxK glycerate kinase II (NCBI) 0.45 b2319 usg hypothetical protein (NCBI) low > 76
Escherichia coli ECOR27 0.50 NOLOHH_00875 glxK glycerate 3-kinase 0.45 NOLOHH_14300 usg aspartate-semialdehyde dehydrogenase low > 75
Enterobacter sp. TBS_079 0.50 MPMX20_03656 Glycerate 2-kinase 0.44 MPMX20_03254 USG-1 protein low > 85
Escherichia coli ECRC62 0.49 BNILDI_22305 glxK glycerate 3-kinase 0.45 BNILDI_13220 usg aspartate-semialdehyde dehydrogenase low > 75
Klebsiella michiganensis M5al 0.49 BWI76_RS22820 glycerate kinase 0.44 BWI76_RS20385 aspartate-semialdehyde dehydrogenase low > 92
Erwinia amylovora T8 0.48 OLJFJH_09230 glycerate kinase 0.45 OLJFJH_11235 aspartate-semialdehyde dehydrogenase low > 58
Rahnella sp. WP5 0.48 EX31_RS07975 glycerate kinase 0.49 EX31_RS19605 aspartate-semialdehyde dehydrogenase low > 89
Pantoea sp. MT58 0.47 IAI47_04105 glycerate kinase 0.43 IAI47_06240 aspartate-semialdehyde dehydrogenase low > 76
Shewanella sp. ANA-3 0.47 Shewana3_2685 glycerate kinase (RefSeq) 0.71 Shewana3_1477 aspartate semialdehyde dehydrogenase (RefSeq) — —
Shewanella oneidensis MR-1 0.47 SO1770 glycerate kinase, putative (NCBI ptt file) 0.71 SO3070 asd aspartate semialdehyde dehydrogenese (NCBI ptt file) — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.47 Psyr_3115 Glycerate kinase 0.38 Psyr_1660 Aspartate-semialdehyde dehydrogenase low > 86
Pseudomonas syringae pv. syringae B728a 0.47 Psyr_3115 Glycerate kinase 0.38 Psyr_1660 Aspartate-semialdehyde dehydrogenase low > 86
Pectobacterium carotovorum WPP14 0.46 HER17_RS04100 glycerate kinase 0.46 HER17_RS06985 aspartate-semialdehyde dehydrogenase low > 75
Erwinia tracheiphila SCR3 0.46 LU632_RS06335 glycerate kinase 0.43 LU632_RS07820 aspartate-semialdehyde dehydrogenase low > 74
Dickeya dadantii 3937 0.46 DDA3937_RS17030 glycerate kinase 0.47 DDA3937_RS14470 aspartate-semialdehyde dehydrogenase — —
Pseudomonas fluorescens FW300-N2E3 0.46 AO353_26900 glycerate kinase 0.38 AO353_20645 aspartate-semialdehyde dehydrogenase low > 101
Pseudomonas sp. DMC3 0.46 GFF2931 Glycerate 2-kinase 0.39 GFF790 USG-1 protein low > 89
Dickeya dianthicola 67-19 0.46 HGI48_RS17085 glycerate kinase 0.46 HGI48_RS14440 aspartate-semialdehyde dehydrogenase — —
Dickeya dianthicola ME23 0.46 DZA65_RS18160 glycerate kinase 0.47 DZA65_RS15375 aspartate-semialdehyde dehydrogenase low > 75
Xanthomonas campestris pv. campestris strain 8004 0.45 Xcc-8004.5387.1 Glycerate kinase (EC 2.7.1.31) 0.56 Xcc-8004.1957.1 Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) — —
Pseudomonas fluorescens GW456-L13 0.45 PfGW456L13_2941 Glycerate kinase (EC 2.7.1.31) 0.40 PfGW456L13_3943 Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) low > 87
Pseudomonas fluorescens SBW25 0.44 PFLU_RS14645 glycerate kinase 0.37 PFLU_RS20555 aspartate-semialdehyde dehydrogenase low > 109
Pseudomonas fluorescens SBW25-INTG 0.44 PFLU_RS14645 glycerate kinase 0.37 PFLU_RS20555 aspartate-semialdehyde dehydrogenase low > 109
Pseudomonas fluorescens FW300-N2E2 0.44 Pf6N2E2_460 Glycerate kinase (EC 2.7.1.31) 0.41 Pf6N2E2_68 Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) low > 103
Pseudomonas fluorescens FW300-N2C3 0.44 AO356_22870 glycerate kinase 0.40 AO356_21425 aspartate-semialdehyde dehydrogenase low > 104
Pseudomonas simiae WCS417 0.44 PS417_13970 glycerate kinase 0.37 PS417_18575 aspartate-semialdehyde dehydrogenase low > 88
Pseudomonas sp. RS175 0.44 PFR28_02469 Glycerate 2-kinase 0.41 PFR28_02819 USG-1 protein low > 88
Pseudomonas sp. S08-1 0.44 OH686_04780 Glycerate kinase 0.36 OH686_04460 Aspartate-semialdehyde dehydrogenase low > 80
Pseudomonas fluorescens FW300-N1B4 0.43 Pf1N1B4_4998 Glycerate kinase (EC 2.7.1.31) 0.38 Pf1N1B4_10 Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) — —
Pseudomonas putida KT2440 0.42 PP_3178 glycerate kinase 0.36 PP_1992 aspartate-semialdehyde dehydrogenase low > 96
Bifidobacterium breve UCC2003 0.42 BBR_RS16760 glycerate kinase 0.12 BBR_RS11025 aspartate-semialdehyde dehydrogenase 0.44 19
Pseudomonas aeruginosa PA14 0.42 IKLFDK_04815 glycerate kinase 0.34 IKLFDK_15855 aspartate-semialdehyde dehydrogenase low > 101
Pseudomonas sp. BP01 0.41 JOY50_RS26670 glycerate kinase 0.36 JOY50_RS16605 aspartate-semialdehyde dehydrogenase low > 84
Pseudomonas sp. SVBP6 0.41 COO64_RS23775 glycerate kinase 0.38 COO64_RS05640 aspartate-semialdehyde dehydrogenase low > 93
Bacteroides thetaiotaomicron VPI-5482 0.36 BT1437 conserved hypothetical protein (NCBI ptt file) 0.40 BT3636 aspartate-semialdehyde dehydrogenase (NCBI ptt file) — —
Phocaeicola vulgatus CL09T03C04 0.35 HMPREF1058_RS12910 glycerate kinase 0.41 HMPREF1058_RS00210 aspartate-semialdehyde dehydrogenase — —
Parabacteroides merdae CL09T00C40 0.35 HMPREF1078_RS08645 glycerate kinase 0.43 HMPREF1078_RS05255 aspartate-semialdehyde dehydrogenase — —
Bacteroides stercoris CC31F 0.34 HMPREF1181_RS16785 glycerate kinase 0.41 HMPREF1181_RS03115 aspartate-semialdehyde dehydrogenase — —
Cellulophaga baltica 18 0.33 M666_RS15730 glycerate kinase 0.39 M666_RS04365 aspartate-semialdehyde dehydrogenase — —
Mucilaginibacter yixingensis YX-36 DSM 26809 0.33 ABZR88_RS00815 glycerate kinase 0.41 ABZR88_RS18675 aspartate-semialdehyde dehydrogenase — —
Bacteroides ovatus ATCC 8483 0.32 BACOVA_02041 glycerate kinase 0.40 BACOVA_03470 aspartate-semialdehyde dehydrogenase — —
Synechocystis sp000284455 PCC 6803 0.26 SGL_RS06360 glycerate kinase 0.41 SGL_RS16920 aspartate-semialdehyde dehydrogenase — —
Echinicola vietnamensis KMM 6221, DSM 17526 0.21 Echvi_4031 glycerate kinase 0.42 Echvi_0713 aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) — —
Mycobacterium tuberculosis H37Rv 0.15 Rv2205c Conserved hypothetical protein 0.37 Rv3708c Aspartate-semialdehyde dehydrogenase Asd (ASA dehydrogenase) (ASADH) (aspartic semialdehyde dehydrogenase) (L-aspartate-beta-semialdehyde dehydrogenase) — —

Not shown: 7 genomes with orthologs for CSW01_18660 only; 33 genomes with orthologs for CSW01_10520 only