Conservation of cofitness between CSW01_10330 and CSW01_08240 in Vibrio cholerae E7946 ATCC 55056

40 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_10330 chemotaxis protein CheY 1.0 CSW01_08240 ATP-binding protein 0.47 10
Shewanella oneidensis MR-1 0.95 SO3209 cheY-3 chemotaxis protein CheY (NCBI ptt file) 0.17 SO0621 sensor histidine kinase (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.95 Shewana3_1360 response regulator receiver protein (RefSeq) 0.17 Shewana3_0614 ATPase domain-containing protein (RefSeq) — —
Shewanella amazonensis SB2B 0.95 Sama_2279 response regulator receiver protein (RefSeq) 0.18 Sama_3304 sensor histidine kinase (RefSeq) low > 62
Shewanella loihica PV-4 0.94 Shew_1384 response regulator receiver protein (RefSeq) 0.20 Shew_0582 integral membrane sensor signal transduction histidine kinase (RefSeq) low > 60
Pseudomonas sp. SVBP6 0.89 COO64_RS25630 chemotaxis response regulator CheY 0.19 COO64_RS17265 sensor histidine kinase low > 93
Pseudomonas stutzeri RCH2 0.88 Psest_1741 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 0.18 Psest_3534 Signal transduction histidine kinase — —
Pseudomonas sp. BP01 0.88 JOY50_RS00580 chemotaxis response regulator CheY 0.19 JOY50_RS10880 sensor histidine kinase low > 84
Pseudomonas fluorescens FW300-N2E2 0.88 Pf6N2E2_2572 Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY 0.19 Pf6N2E2_42 Sensor protein PhoQ (EC 2.7.13.3) low > 103
Pseudomonas fluorescens FW300-N2C3 0.88 AO356_03725 histidine kinase 0.19 AO356_21285 histidine kinase low > 104
Pseudomonas aeruginosa PA14 0.87 IKLFDK_06925 chemotaxis protein CheY 0.20 IKLFDK_13335 two-component system sensor histidine kinase CarS low > 101
Pseudomonas syringae pv. syringae B728a ΔmexB 0.87 Psyr_3436 Response regulator receiver 0.19 Psyr_3211 ATP-binding region, ATPase-like:Histidine kinase, HAMP region low > 86
Pseudomonas syringae pv. syringae B728a 0.87 Psyr_3436 Response regulator receiver 0.19 Psyr_3211 ATP-binding region, ATPase-like:Histidine kinase, HAMP region low > 86
Pseudomonas sp. RS175 0.86 PFR28_00853 Chemotaxis protein CheY 0.18 PFR28_02846 Adaptive-response sensory-kinase SasA 0.24 56
Pseudomonas fluorescens FW300-N2E3 0.86 AO353_18790 histidine kinase 0.18 AO353_19780 histidine kinase low > 101
Pseudomonas fluorescens GW456-L13 0.86 PfGW456L13_4330 Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY 0.20 PfGW456L13_2452 Sensor protein PhoQ (EC 2.7.13.3) low > 87
Pseudomonas fluorescens FW300-N1B4 0.85 Pf1N1B4_3627 Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY 0.20 Pf1N1B4_104 Sensor protein PhoQ (EC 2.7.13.3) low > 87
Pseudomonas sp. S08-1 0.85 OH686_02725 Chemotaxis regulator - transmits chemoreceptor signals to flagellar motor components CheY 0.19 OH686_00060 Sensor protein low > 80
Pseudomonas sp. DMC3 0.85 GFF2473 Chemotaxis protein CheY 0.19 GFF1366 Adaptive-response sensory-kinase SasA low > 89
Marinobacter adhaerens HP15 0.85 HP15_2301 response regulator receiver domain protein (CheY-) 0.24 HP15_2936 periplasmic sensor signal transduction histidine kinase low > 73
Xanthomonas campestris pv. campestris strain 8004 0.83 Xcc-8004.2833.1 Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY 0.20 Xcc-8004.5007.1 Sensor protein PhoQ (EC 2.7.13.3) — —
Pseudomonas putida KT2440 0.83 PP_4340 response regulator for chemotactic signal transduction 0.19 PP_2348 Sensor histidine kinase low > 96
Lysobacter sp. OAE881 0.80 ABIE51_RS16870 chemotaxis response regulator CheY 0.18 ABIE51_RS03945 ATP-binding protein low > 62
Dyella japonica UNC79MFTsu3.2 0.75 ABZR86_RS20270 chemotaxis response regulator CheY 0.15 ABZR86_RS18365 ATP-binding protein low > 74
Rhodanobacter denitrificans MT42 0.74 LRK55_RS13325 chemotaxis response regulator CheY 0.16 LRK55_RS05735 ATP-binding protein — —
Rhodanobacter denitrificans FW104-10B01 0.74 LRK54_RS13585 chemotaxis response regulator CheY 0.16 LRK54_RS05980 ATP-binding protein low > 59
Rhodanobacter sp000427505 FW510-R12 0.74 LRK53_RS14990 chemotaxis response regulator CheY 0.16 LRK53_RS17385 ATP-binding protein — —
Rhodanobacter sp. FW510-T8 0.73 OKGIIK_02835 cheY chemotaxis response regulator CheY 0.16 OKGIIK_00640 baeS two-component sensor histidine kinase — —
Methylophilus sp. DMC18 0.73 GFF752 Chemotaxis protein CheY 0.19 GFF418 Adaptive-response sensory-kinase SasA low > 43
Castellaniella sp019104865 MT123 0.71 ABCV34_RS05810 chemotaxis response regulator CheY 0.25 ABCV34_RS15615 sensor histidine kinase low > 48
Magnetospirillum magneticum AMB-1 0.57 AMB_RS17710 response regulator 0.22 AMB_RS00955 ATP-binding protein — —
Rhodospirillum rubrum S1H 0.57 Rru_A2837 Response regulator receiver domain protein (CheY) (NCBI) 0.22 Rru_A3188 Histidine Kinase (NCBI) low > 58
Azospirillum sp. SherDot2 0.57 MPMX19_01605 Chemotaxis protein CheY 0.29 MPMX19_04077 Adaptive-response sensory-kinase SasA low > 112
Rhodopseudomonas palustris CGA009 0.57 TX73_006030 response regulator 0.23 TX73_009875 sensor histidine kinase low > 86
Xanthobacter sp. DMC5 0.56 GFF4475 Chemotaxis protein CheY 0.21 GFF3490 Virulence sensor histidine kinase PhoQ — —
Caulobacter crescentus NA1000 Δfur 0.52 CCNA_00628 chemotaxis protein cheY 0.22 CCNA_02853 two-component sensor histidine kinase low > 67
Caulobacter crescentus NA1000 0.52 CCNA_00628 chemotaxis protein cheY 0.22 CCNA_02853 two-component sensor histidine kinase low > 66
Bosea sp. OAE506 0.51 ABIE41_RS23275 response regulator 0.23 ABIE41_RS21470 sensor histidine kinase low > 77
Sphingomonas koreensis DSMZ 15582 0.40 Ga0059261_1116 Response regulator receiver domain 0.24 Ga0059261_1370 Signal transduction histidine kinase low > 68
Brevundimonas sp. GW460-12-10-14-LB2 0.39 A4249_RS15585 response regulator 0.21 A4249_RS15670 sensor histidine kinase — —
Sinorhizobium meliloti 1021 0.33 SMc03011 chemotaxis regulator protein 0.19 SMc00129 sensor histidine kinase — —

Not shown: 49 genomes with orthologs for CSW01_10330 only; 3 genomes with orthologs for CSW01_08240 only