| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Vibrio cholerae E7946 ATCC 55056 | 1.0 | CSW01_10460 | | Nif3-like dinuclear metal center hexameric protein | 1.0 | CSW01_07790 | | glycerol-3-phosphate transporter permease | 0.43 | 20 |
| Pectobacterium carotovorum WPP14 | 0.59 | HER17_RS14990 | | type 2 GTP cyclohydrolase I | 0.43 | HER17_RS00615 | | sn-glycerol-3-phosphate ABC transporter permease UgpA | low | > 75 |
| Serratia liquefaciens MT49 | 0.58 | IAI46_06210 | | type 2 GTP cyclohydrolase I | 0.43 | IAI46_00995 | | sn-glycerol-3-phosphate ABC transporter permease UgpA | low | > 87 |
| Pantoea agglomerans CFBP13505 P0401 | 0.58 | PagCFBP13505_RS03495 | | Nif3-like dinuclear metal center hexameric protein | 0.43 | PagCFBP13505_RS18110 | | sn-glycerol-3-phosphate ABC transporter permease UgpA | low | > 74 |
| Erwinia amylovora T8 | 0.58 | OLJFJH_17010 | | UPF0135 protein ybgI | 0.43 | OLJFJH_04325 | | sn-glycerol-3-phosphate ABC transporter permease UgpA | low | > 58 |
| Pantoea sp. MT58 | 0.57 | IAI47_13810 | | type 2 GTP cyclohydrolase I | 0.43 | IAI47_01595 | | sn-glycerol-3-phosphate ABC transporter permease UgpA | low | > 76 |
| Rahnella sp. WP5 | 0.57 | EX31_RS23375 | | type 2 GTP cyclohydrolase I | 0.44 | EX31_RS14755 | | sn-glycerol-3-phosphate ABC transporter permease UgpA | low | > 89 |
| Dickeya dadantii 3937 | 0.56 | DDA3937_RS06410 | | type 2 GTP cyclohydrolase I | 0.39 | DDA3937_RS00725 | | sn-glycerol-3-phosphate ABC transporter permease UgpA | low | > 74 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.55 | GFF4615 | | FIG137478: Hypothetical protein YbgI | 0.42 | GFF556 | | Glycerol-3-phosphate ABC transporter, permease protein UgpA (TC 3.A.1.1.3) | low | > 78 |
| Escherichia coli BW25113 | 0.55 | b0710 | ybgI | conserved metal-binding protein (NCBI) | 0.41 | b3452 | ugpA | glycerol-3-phosphate transporter subunit (NCBI) | low | > 76 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.55 | OHPLBJKB_03007 | | GTP cyclohydrolase 1 type 2 | 0.41 | OHPLBJKB_00251 | | sn-glycerol-3-phosphate transport system permease protein UgpA | low | > 74 |
| Escherichia coli ECRC102 | 0.55 | NIAGMN_05065 | ybgI | radiation resistance protein YbgI | 0.41 | NIAGMN_14545 | ugpA | sn-glycerol-3-phosphate ABC transporter permease UgpA | low | > 80 |
| Escherichia coli ECOR27 | 0.55 | NOLOHH_23395 | ybgI | radiation resistance protein YbgI | 0.41 | NOLOHH_08565 | ugpA | sn-glycerol-3-phosphate ABC transporter permease UgpA | low | > 76 |
| Escherichia coli Nissle 1917 | 0.55 | ECOLIN_RS03800 | | radiation resistance protein YbgI | 0.41 | ECOLIN_RS19740 | | sn-glycerol-3-phosphate ABC transporter permease UgpA | low | > 55 |
| Escherichia coli ECRC99 | 0.55 | KEDOAH_20955 | ybgI | radiation resistance protein YbgI | 0.41 | KEDOAH_11365 | ugpA | sn-glycerol-3-phosphate ABC transporter permease UgpA | — | — |
| Escherichia coli ECRC100 | 0.55 | OKFHMN_07010 | ybgI | radiation resistance protein YbgI | 0.41 | OKFHMN_16775 | ugpA | sn-glycerol-3-phosphate ABC transporter permease UgpA | low | > 79 |
| Escherichia coli ECRC101 | 0.55 | MCAODC_26230 | ybgI | radiation resistance protein YbgI | 0.41 | MCAODC_07305 | ugpA | sn-glycerol-3-phosphate ABC transporter permease UgpA | low | > 87 |
| Escherichia coli ECRC62 | 0.55 | BNILDI_21390 | ybgI | radiation resistance protein YbgI | 0.41 | BNILDI_02940 | ugpA | sn-glycerol-3-phosphate ABC transporter permease UgpA | low | > 75 |
| Escherichia fergusonii Becca | 0.55 | EFB2_03393 | | GTP cyclohydrolase 1 type 2 | 0.40 | EFB2_00370 | | sn-glycerol-3-phosphate transport system permease protein UgpA | low | > 86 |
| Escherichia coli ECOR38 | 0.55 | HEPCGN_01200 | ybgI | radiation resistance protein YbgI | 0.41 | HEPCGN_15595 | ugpA | sn-glycerol-3-phosphate ABC transporter permease UgpA | low | > 88 |
| Escherichia coli ECRC98 | 0.55 | JDDGAC_10665 | ybgI | radiation resistance protein YbgI | 0.41 | JDDGAC_20405 | ugpA | sn-glycerol-3-phosphate ABC transporter permease UgpA | low | > 87 |
| Escherichia coli BL21 | 0.54 | ECD_00670 | | NIF3 family metal-binding protein | 0.41 | ECD_03301 | | sn-glycerol-3-phosphate ABC transporter permease | low | > 61 |
| Enterobacter sp. TBS_079 | 0.54 | MPMX20_01344 | | GTP cyclohydrolase 1 type 2 | 0.42 | MPMX20_04328 | | sn-glycerol-3-phosphate transport system permease protein UgpA | low | > 85 |
| Enterobacter asburiae PDN3 | 0.54 | EX28DRAFT_2277 | | dinuclear metal center protein, YbgI/SA1388 family | 0.42 | EX28DRAFT_4284 | | ABC-type sugar transport systems, permease components | low | > 76 |
| Dickeya dianthicola ME23 | 0.54 | DZA65_RS06800 | | type 2 GTP cyclohydrolase I | 0.39 | DZA65_RS21660 | | sn-glycerol-3-phosphate ABC transporter permease UgpA | low | > 75 |
| Klebsiella pneumoniae MKP103 | 0.53 | KDGMDA_16665 | | type 2 GTP cyclohydrolase I | 0.41 | KDGMDA_07175 | | sn-glycerol-3-phosphate ABC transporter permease UgpA | low | > 95 |
| Dickeya dianthicola 67-19 | 0.53 | HGI48_RS06455 | | type 2 GTP cyclohydrolase I | 0.39 | HGI48_RS20645 | | sn-glycerol-3-phosphate ABC transporter permease UgpA | low | > 71 |
| Klebsiella michiganensis M5al | 0.53 | BWI76_RS08345 | | Nif3-like dinuclear metal center protein | 0.42 | BWI76_RS26300 | | glycerol-3-phosphate transporter permease | low | > 92 |
| Pseudomonas lactucae CFBP13502 | 0.51 | GEMAOFIL_00948 | | GTP cyclohydrolase 1 type 2 | 0.15 | GEMAOFIL_02790 | | Lactose transport system permease protein LacF | — | — |
| Pseudomonas sp. SVBP6 | 0.51 | COO64_RS11720 | | Nif3-like dinuclear metal center hexameric protein | 0.14 | COO64_RS04560 | | carbohydrate ABC transporter permease | low | > 93 |
| Pseudomonas fluorescens FW300-N2E2 | 0.51 | Pf6N2E2_5256 | | FIG137478: Hypothetical protein YbgI | 0.15 | Pf6N2E2_809 | | Various polyols ABC transporter, permease component 1 | low | > 103 |
| Pseudomonas syringae pv. syringae B728a | 0.50 | Psyr_4129 | | Protein of unknown function DUF34 | 0.27 | Psyr_4503 | | carbohydrate ABC transporter membrane protein 1, CUT1 family | 0.22 | 53 |
| Pseudomonas putida KT2440 | 0.50 | PP_1302 | | putative metal-binding hydrolase-oxidase enzyme | 0.16 | PP_1016 | | mannose/glucose ABC transporter, permease protein | low | > 96 |
| Pseudomonas simiae WCS417 | 0.50 | PS417_03710 | | metal-binding protein | 0.15 | PS417_12710 | | ABC transporter for D-Mannitol and D-Sorbitol, permease component 2 (from data) | low | > 88 |
| Pseudomonas sp. DMC3 | 0.50 | GFF1847 | | GTP cyclohydrolase 1 type 2 | 0.15 | GFF2896 | | sn-glycerol-3-phosphate transport system permease protein UgpA | low | > 89 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.50 | Psyr_4129 | | Protein of unknown function DUF34 | 0.27 | Psyr_4503 | | carbohydrate ABC transporter membrane protein 1, CUT1 family | low | > 86 |
| Pseudomonas segetis P6 | 0.50 | ACVTMO_RS19035 | | Nif3-like dinuclear metal center hexameric protein | 0.15 | ACVTMO_RS14050 | | carbohydrate ABC transporter permease | low | > 75 |
| Pseudomonas sp. BP01 | 0.50 | JOY50_RS15280 | | Nif3-like dinuclear metal center hexameric protein | 0.16 | JOY50_RS11420 | | carbohydrate ABC transporter permease | low | > 84 |
| Pseudomonas fluorescens SBW25-INTG | 0.50 | PFLU_RS03760 | | Nif3-like dinuclear metal center hexameric protein | 0.15 | PFLU_RS13400 | | sugar ABC transporter permease | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.50 | PFLU_RS03760 | | Nif3-like dinuclear metal center hexameric protein | 0.15 | PFLU_RS13400 | | sugar ABC transporter permease | low | > 109 |
| Pseudomonas fluorescens FW300-N2C3 | 0.50 | AO356_16660 | | metal-binding protein | 0.15 | AO356_27675 | | sugar ABC transporter permease | low | > 104 |
| Pseudomonas stutzeri RCH2 | 0.50 | Psest_3295 | | dinuclear metal center protein, YbgI/SA1388 family | 0.15 | Psest_1897 | | ABC-type sugar transport systems, permease components | low | > 67 |
| Pseudomonas sp. RS175 | 0.50 | PFR28_00192 | | GTP cyclohydrolase 1 type 2 | 0.15 | PFR28_01712 | | sn-glycerol-3-phosphate transport system permease protein UgpA | low | > 88 |
| Pseudomonas fluorescens FW300-N2E3 | 0.50 | AO353_05085 | | metal-binding protein | 0.15 | AO353_25885 | | sugar ABC transporter permease | low | > 101 |
| Pseudomonas aeruginosa PUPa3 | 0.50 | DQ20_RS56710 | | Nif3-like dinuclear metal center hexameric protein | 0.14 | DQ20_RS59325 | | sugar ABC transporter permease | low | > 101 |
| Pseudomonas aeruginosa MRSN321 | 0.50 | DY961_RS24250 | | Nif3-like dinuclear metal center hexameric protein | 0.14 | DY961_RS18090 | | sugar ABC transporter permease | low | > 100 |
| Pseudomonas orientalis W4I3 | 0.50 | QF045_RS06690 | | Nif3-like dinuclear metal center hexameric protein | 0.15 | QF045_RS17185 | | sugar ABC transporter permease | low | > 93 |
| Pseudomonas aeruginosa PA14 | 0.50 | IKLFDK_01865 | | Nif3-like dinuclear metal center hexameric protein | 0.14 | IKLFDK_11455 | | sugar ABC transporter permease | 0.26 | 11 |
| Pseudomonas sp. S08-1 | 0.49 | OH686_08455 | | GTP cyclohydrolase 1 type 2-related YbgI | 0.14 | OH686_02465 | | Glucose ABC transport system, inner membrane component 1 | low | > 80 |
| Pseudomonas fluorescens GW456-L13 | 0.49 | PfGW456L13_4997 | | FIG137478: Hypothetical protein YbgI | 0.15 | PfGW456L13_3041 | | Various polyols ABC transporter, permease component 1 | low | > 87 |
| Ralstonia sp. UNC404CL21Col | 0.47 | ABZR87_RS02395 | | Nif3-like dinuclear metal center hexameric protein | 0.48 | ABZR87_RS11090 | | sn-glycerol-3-phosphate ABC transporter permease UgpA | low | > 80 |
| Marinobacter adhaerens HP15 | 0.47 | HP15_2426 | | NGG1p interacting factor 3, NIF3 | 0.14 | HP15_2957 | | sugar ABC transporter, permease protein | low | > 73 |
| Castellaniella sp019104865 MT123 | 0.47 | ABCV34_RS12645 | | Nif3-like dinuclear metal center hexameric protein | 0.50 | ABCV34_RS03600 | | sn-glycerol-3-phosphate ABC transporter permease UgpA | low | > 48 |
| Ralstonia solanacearum IBSBF1503 | 0.46 | RALBFv3_RS06740 | | Nif3-like dinuclear metal center hexameric protein | 0.47 | RALBFv3_RS15560 | | sn-glycerol-3-phosphate ABC transporter permease UgpA | low | > 76 |
| Ralstonia solanacearum GMI1000 | 0.46 | RS_RS14685 | | Nif3-like dinuclear metal center hexameric protein | 0.48 | RS_RS06340 | | sn-glycerol-3-phosphate ABC transporter permease UgpA | low | > 80 |
| Ralstonia solanacearum PSI07 | 0.46 | RPSI07_RS10495 | | Nif3-like dinuclear metal center hexameric protein | 0.48 | RPSI07_RS17795 | | sn-glycerol-3-phosphate ABC transporter permease UgpA | low | > 81 |
| Cupriavidus basilensis FW507-4G11 | 0.46 | RR42_RS18835 | | Nif3-like dinuclear metal center hexameric protein | 0.49 | RR42_RS12965 | | glycerol-3-phosphate transporter permease | low | > 128 |
| Ralstonia solanacearum UW163 | 0.46 | UW163_RS06875 | | Nif3-like dinuclear metal center hexameric protein | 0.47 | UW163_RS13020 | | sn-glycerol-3-phosphate ABC transporter permease UgpA | — | — |
| Herbaspirillum seropedicae SmR1 | 0.45 | HSERO_RS20255 | | metal-binding protein | 0.50 | HSERO_RS18950 | | glycerol-3-phosphate transporter permease | low | > 78 |
| Paraburkholderia sabiae LMG 24235 | 0.44 | QEN71_RS27790 | | Nif3-like dinuclear metal center hexameric protein | 0.46 | QEN71_RS27610 | | sn-glycerol-3-phosphate ABC transporter permease UgpA | low | > 153 |
| Burkholderia phytofirmans PsJN | 0.43 | BPHYT_RS17635 | | metal-binding protein | 0.47 | BPHYT_RS17460 | | glycerol-3-phosphate transporter permease | low | > 109 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.42 | H281DRAFT_05668 | | dinuclear metal center protein, YbgI/SA1388 family | 0.48 | H281DRAFT_05703 | | glycerol 3-phosphate ABC transporter membrane protein /carbohydrate ABC transporter membrane protein 1, CUT1 family | low | > 103 |
| Paraburkholderia graminis OAS925 | 0.42 | ABIE53_003686 | | dinuclear metal center YbgI/SA1388 family protein | 0.48 | ABIE53_003652 | | sn-glycerol 3-phosphate transport system permease protein | low | > 113 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.41 | GFF1298 | | FIG137478: Hypothetical protein YbgI | 0.46 | GFF1260 | | Glycerol-3-phosphate ABC transporter, permease protein UgpA (TC 3.A.1.1.3) | low | > 90 |
| Variovorax sp. SCN45 | 0.39 | GFF5367 | | GTP cyclohydrolase 1 type 2 homolog YbgI | 0.46 | GFF2536 | | Glycerol-3-phosphate ABC transporter, permease protein UgpA (TC 3.A.1.1.3) | low | > 127 |
| Acidovorax sp. GW101-3H11 | 0.36 | Ac3H11_4745 | | FIG137478: Hypothetical protein YbgI | 0.48 | Ac3H11_4787 | | Glycerol-3-phosphate ABC transporter, permease protein UgpA (TC 3.A.1.1.3) | low | > 79 |
| Variovorax sp. OAS795 | 0.36 | ABID97_RS23060 | | Nif3-like dinuclear metal center hexameric protein | 0.45 | ABID97_RS07225 | | sn-glycerol-3-phosphate ABC transporter permease UgpA | low | > 91 |
Not shown: 12 genomes with orthologs for CSW01_10460 only; 23 genomes with orthologs for CSW01_07790 only