Conservation of cofitness between CSW01_06130 and CSW01_07630 in Vibrio cholerae E7946 ATCC 55056

62 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_06130 DNA polymerase II 1.0 CSW01_07630 ABC-F family ATPase 0.52 6
Pseudomonas sp. S08-1 0.52 OH686_16850 DNA polymerase II 0.75 OH686_00750 Bis-ABC ATPase YbiT low > 80
Pseudomonas sp. BP01 0.51 JOY50_RS10610 DNA polymerase II 0.76 JOY50_RS24495 ABC-F family ATPase low > 84
Pseudomonas fluorescens GW456-L13 0.51 PfGW456L13_2472 DNA polymerase II (EC 2.7.7.7) 0.76 PfGW456L13_3023 ABC transporter ATP-binding protein uup low > 87
Erwinia tracheiphila HP pepo 2.2 0.51 IJEDHG_06070 polB DNA polymerase II 0.78 IJEDHG_19990 uup ABC-F family ATPase low > 61
Erwinia tracheiphila SCR3 0.51 LU632_RS02810 polB DNA polymerase II 0.78 LU632_RS09525 ABC-F family ATPase low > 73
Dickeya dadantii 3937 0.51 DDA3937_RS18230 DNA polymerase II 0.78 DDA3937_RS14260 ABC-F family ATPase low > 74
Rahnella sp. WP5 0.51 EX31_RS03740 DNA polymerase II 0.77 EX31_RS18775 ABC-F family ATPase low > 89
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.51 GFF182 DNA polymerase II (EC 2.7.7.7) 0.78 GFF717 Putative ATPase component of ABC transporter with duplicated ATPase domain low > 78
Pseudomonas putida KT2440 0.51 PP_2393 DNA polymerase II 0.75 PP_2936 putative ATP-binding component of a transport system low > 96
Pseudomonas lactucae CFBP13502 0.51 GEMAOFIL_02129 DNA polymerase II 0.73 GEMAOFIL_03245 putative ABC transporter ATP-binding protein YbiT low > 96
Pseudomonas fluorescens FW300-N1B4 0.51 Pf1N1B4_87 DNA polymerase II (EC 2.7.7.7) 0.71 Pf1N1B4_4749 ABC transporter ATP-binding protein uup low > 87
Pseudomonas fluorescens FW300-N2E3 0.50 AO353_29350 DNA polymerase II 0.70 AO353_26510 ABC transporter ATP-binding protein low > 101
Pseudomonas sp. RS175 0.50 PFR28_01299 DNA polymerase II 0.74 PFR28_01696 putative ABC transporter ATP-binding protein YbiT low > 88
Escherichia coli HS(pFamp)R (ATCC 700891) 0.50 OHPLBJKB_03598 DNA polymerase II 0.79 OHPLBJKB_02893 putative ABC transporter ATP-binding protein YbiT low > 74
Escherichia coli BW25113 0.50 b0060 polB DNA polymerase II (NCBI) 0.79 b0820 ybiT fused predicted transporter subunits of ABC superfamily: ATP-binding components (NCBI) low > 76
Escherichia coli BL21 0.50 ECD_00062 DNA polymerase II 0.79 ECD_00787 ABC-F family putative regulatory ATPase low > 61
Pseudomonas sp. DMC3 0.50 GFF1404 DNA polymerase II 0.73 GFF2697 putative ABC transporter ATP-binding protein YbiT low > 89
Erwinia amylovora T8 0.50 OLJFJH_01335 DNA polymerase II 0.78 OLJFJH_16400 ABC-F family ATPase low > 58
Escherichia coli Nissle 1917 0.50 ECOLIN_RS00320 DNA polymerase II 0.79 ECOLIN_RS04370 ABC-F family ATPase low > 55
Dickeya dianthicola ME23 0.50 DZA65_RS19305 DNA polymerase II 0.78 DZA65_RS14910 ABC-F family ATPase low > 75
Pseudomonas sp. SVBP6 0.50 COO64_RS07850 DNA polymerase II 0.76 COO64_RS14760 ABC-F family ATPase low > 93
Escherichia coli ECRC100 0.50 OKFHMN_10795 polB DNA polymerase II 0.79 OKFHMN_06160 ybiT ABC-F family ATPase low > 79
Escherichia coli ECRC101 0.50 MCAODC_01310 polB DNA polymerase II 0.79 MCAODC_25375 ybiT ABC-F family ATPase low > 87
Pseudomonas syringae pv. syringae B728a 0.50 Psyr_2361 DNA damage-inducible DNA polymerase II 0.71 Psyr_2495 ABC transporter low > 86
Escherichia coli ECRC102 0.50 NIAGMN_08645 polB DNA polymerase II 0.79 NIAGMN_04205 ybiT ABC-F family ATPase low > 80
Pseudomonas syringae pv. syringae B728a ΔmexB 0.50 Psyr_2361 DNA damage-inducible DNA polymerase II 0.71 Psyr_2495 ABC transporter low > 86
Escherichia coli ECRC99 0.50 KEDOAH_17360 polB DNA polymerase II 0.79 KEDOAH_21750 ybiT ABC-F family ATPase — —
Escherichia coli ECRC98 0.50 JDDGAC_14390 polB DNA polymerase II 0.79 JDDGAC_09795 ybiT ABC-F family ATPase 0.39 10
Escherichia coli ECOR38 0.50 HEPCGN_08785 polB DNA polymerase II 0.79 HEPCGN_01880 ybiT ABC-F family ATPase low > 88
Escherichia coli ECRC62 0.50 BNILDI_08465 polB DNA polymerase II 0.79 BNILDI_20790 ybiT ABC-F family ATPase low > 75
Pseudomonas fluorescens FW300-N2E2 0.50 Pf6N2E2_2137 DNA polymerase II (EC 2.7.7.7) 0.72 Pf6N2E2_795 ABC transporter ATP-binding protein uup low > 103
Escherichia fergusonii Becca 0.50 EFB2_03985 DNA polymerase II 0.79 EFB2_03285 putative ABC transporter ATP-binding protein YbiT low > 86
Dickeya dianthicola 67-19 0.50 HGI48_RS18165 DNA polymerase II 0.78 HGI48_RS14235 ABC-F family ATPase low > 71
Escherichia coli ECOR27 0.50 NOLOHH_03140 polB DNA polymerase II 0.79 NOLOHH_22510 ybiT ABC-F family ATPase low > 76
Pseudomonas simiae WCS417 0.50 PS417_09565 DNA polymerase II 0.74 PS417_13100 ABC transporter ATP-binding protein low > 88
Pseudomonas aeruginosa PUPa3 0.50 DQ20_RS55250 DNA polymerase II 0.74 DQ20_RS38320 ABC-F family ATPase low > 101
Serratia liquefaciens MT49 0.50 IAI46_03280 DNA polymerase II 0.77 IAI46_07820 ABC-F family ATPase 0.41 44
Pseudomonas aeruginosa MRSN321 0.50 DY961_RS21180 DNA polymerase II 0.74 DY961_RS28835 ABC-F family ATPase low > 100
Pseudomonas fluorescens FW300-N2C3 0.50 AO356_01325 DNA polymerase II 0.72 AO356_27740 ABC transporter ATP-binding protein low > 104
Pseudomonas aeruginosa PA14 0.50 IKLFDK_09200 DNA polymerase II 0.72 IKLFDK_09590 ABC-F family ATPase low > 98
Enterobacter asburiae PDN3 0.50 EX28DRAFT_3652 DNA polymerase elongation subunit (family B) 0.78 EX28DRAFT_2147 ATPase components of ABC transporters with duplicated ATPase domains low > 76
Pseudomonas orientalis W4I3 0.50 QF045_RS12170 DNA polymerase II 0.74 QF045_RS16875 ABC-F family ATPase low > 93
Klebsiella pneumoniae MKP103 0.50 KDGMDA_12800 DNA polymerase II 0.78 KDGMDA_17295 ABC-F family ATPase low > 95
Paraburkholderia graminis OAS925 0.49 ABIE53_004018 DNA polymerase-2 0.66 ABIE53_002379 ATPase subunit of ABC transporter with duplicated ATPase domains low > 113
Klebsiella michiganensis M5al 0.49 BWI76_RS04575 DNA polymerase II 0.78 BWI76_RS09040 ABC-F family ATPase low > 92
Paraburkholderia bryophila 376MFSha3.1 0.49 H281DRAFT_01369 DNA damage-inducible DNA polymerase II 0.66 H281DRAFT_05171 ATPase components of ABC transporters with duplicated ATPase domains low > 103
Pseudomonas stutzeri RCH2 0.49 Psest_1519 DNA polymerase elongation subunit (family B) 0.76 Psest_2115 ATPase components of ABC transporters with duplicated ATPase domains low > 67
Burkholderia phytofirmans PsJN 0.49 BPHYT_RS23105 DNA polymerase 0.66 BPHYT_RS11480 heme ABC transporter ATP-binding protein low > 109
Pseudomonas fluorescens SBW25-INTG 0.49 PFLU_RS10185 DNA polymerase II 0.74 PFLU_RS13740 ABC-F family ATPase low > 109
Enterobacter sp. TBS_079 0.49 MPMX20_00754 DNA polymerase II 0.79 MPMX20_01457 putative ABC transporter ATP-binding protein YbiT low > 85
Pseudomonas fluorescens SBW25 0.49 PFLU_RS10185 DNA polymerase II 0.74 PFLU_RS13740 ABC-F family ATPase low > 109
Cupriavidus basilensis FW507-4G11 0.49 RR42_RS09335 DNA polymerase II 0.67 RR42_RS11370 ABC transporter ATP-binding protein low > 128
Pantoea sp. MT58 0.49 IAI47_16050 DNA polymerase II 0.77 IAI47_13150 ABC-F family ATPase low > 76
Pantoea agglomerans CFBP13505 P0401 0.49 PagCFBP13505_RS12945 DNA polymerase II 0.77 PagCFBP13505_RS04175 ABC-F family ATPase low > 74
Paraburkholderia sabiae LMG 24235 0.48 QEN71_RS13385 DNA polymerase II 0.65 QEN71_RS07090 ABC-F family ATPase low > 153
Herbaspirillum seropedicae SmR1 0.48 HSERO_RS12200 DNA polymerase II 0.69 HSERO_RS11060 ABC transporter ATP-binding protein — —
Pectobacterium carotovorum WPP14 0.48 HER17_RS02995 DNA polymerase II 0.79 HER17_RS07215 ABC-F family ATPase low > 75
Alteromonas macleodii MIT1002 0.42 MIT1002_03358 DNA polymerase II 0.66 MIT1002_00912 putative ABC transporter ATP-binding protein YheS low > 70
Shewanella amazonensis SB2B 0.41 Sama_1250 DNA polymerase II (RefSeq) 0.82 Sama_1386 ABC transporter, ATP-binding protein (RefSeq) low > 62
Shewanella sp. ANA-3 0.41 Shewana3_2629 DNA polymerase II (RefSeq) 0.79 Shewana3_2760 ABC transporter related (RefSeq) low > 73
Shewanella loihica PV-4 0.40 Shew_2482 DNA polymerase II (RefSeq) 0.79 Shew_1676 ABC transporter-related protein (RefSeq) — —
Shewanella oneidensis MR-1 0.40 SO1820 polB DNA polymerase II (NCBI ptt file) 0.79 SO1690 ABC transporter, ATP-binding protein (NCBI ptt file) low > 76

Not shown: 3 genomes with orthologs for CSW01_06130 only; 22 genomes with orthologs for CSW01_07630 only