Conservation of cofitness between CSW01_18835 and CSW01_06735 in Vibrio cholerae E7946 ATCC 55056

40 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_18835 acyl-CoA thioesterase 1.0 CSW01_06735 methylisocitrate lyase 0.70 13
Shewanella loihica PV-4 0.79 Shew_1607 thioesterase superfamily protein (RefSeq) 0.67 Shew_1820 prpB 2-methylisocitrate lyase (RefSeq) low > 60
Shewanella sp. ANA-3 0.78 Shewana3_2555 thioesterase superfamily protein (RefSeq) 0.63 Shewana3_3825 prpB 2-methylisocitrate lyase (RefSeq) low > 73
Shewanella amazonensis SB2B 0.78 Sama_1977 cytosolic long-chain acyl-CoA thioester hydrolase family protein (RefSeq) 0.61 Sama_3294 prpB 2-methylisocitrate lyase (RefSeq) low > 62
Shewanella oneidensis MR-1 0.78 SO2772 cytosolic long-chain acyl-CoA thioester hydrolase family protein (NCBI ptt file) 0.63 SO0345 prpB methylisocitrate lyase (NCBI ptt file) low > 76
Dyella japonica UNC79MFTsu3.2 0.54 ABZR86_RS22000 acyl-CoA thioesterase 0.56 ABZR86_RS08480 methylisocitrate lyase 0.38 11
Paraburkholderia bryophila 376MFSha3.1 0.51 H281DRAFT_04313 Acyl-CoA hydrolase 0.30 H281DRAFT_06209 carboxyvinyl-carboxyphosphonate phosphorylmutase low > 103
Rhodanobacter denitrificans FW104-10B01 0.51 LRK54_RS03670 acyl-CoA thioesterase 0.58 LRK54_RS00695 methylisocitrate lyase low > 59
Lysobacter sp. OAE881 0.51 ABIE51_RS06380 acyl-CoA thioesterase 0.57 ABIE51_RS06015 methylisocitrate lyase low > 62
Rhodanobacter sp000427505 FW510-R12 0.50 LRK53_RS06275 acyl-CoA thioesterase 0.60 LRK53_RS09460 methylisocitrate lyase 0.33 54
Rhodanobacter sp. FW510-T8 0.50 OKGIIK_10560 yciA acyl-CoA thioesterase 0.59 OKGIIK_06565 prpB methylisocitrate lyase low > 52
Rhodanobacter denitrificans MT42 0.49 LRK55_RS03420 acyl-CoA thioesterase 0.58 LRK55_RS00470 methylisocitrate lyase low > 63
Pseudomonas stutzeri RCH2 0.36 Psest_0771 Acyl-CoA hydrolase 0.63 Psest_2321 methylisocitrate lyase low > 67
Ralstonia sp. UNC404CL21Col 0.36 ABZR87_RS17075 acyl-CoA thioesterase 0.62 ABZR87_RS14590 methylisocitrate lyase low > 80
Pseudomonas fluorescens FW300-N2E3 0.35 AO353_10080 acyl-CoA hydrolase 0.64 AO353_00900 2-methylisocitrate lyase low > 101
Ralstonia solanacearum PSI07 0.34 RPSI07_RS00670 acyl-CoA thioesterase 0.62 RPSI07_RS14645 methylisocitrate lyase low > 81
Pseudomonas fluorescens GW456-L13 0.34 PfGW456L13_719 cytosolic long-chain acyl-CoA thioester hydrolase family protein 0.63 PfGW456L13_4118 Methylisocitrate lyase (EC 4.1.3.30) low > 87
Pseudomonas sp. S08-1 0.34 OH686_12965 cytosolic long-chain acyl-CoA thioester hydrolase family protein 0.56 OH686_01690 methylisocitrate lyase low > 80
Pseudomonas segetis P6 0.34 MPMX49_00198 hypothetical protein 0.62 MPMX49_02628 2-methylisocitrate lyase low > 75
Ralstonia solanacearum UW163 0.33 UW163_RS23035 acyl-CoA thioesterase 0.63 UW163_RS11055 methylisocitrate lyase — —
Ralstonia solanacearum IBSBF1503 0.33 RALBFv3_RS22490 acyl-CoA thioesterase 0.63 RALBFv3_RS02670 methylisocitrate lyase low > 76
Ralstonia solanacearum GMI1000 0.33 RS_RS18125 acyl-CoA thioesterase 0.62 RS_RS10050 methylisocitrate lyase low > 80
Cupriavidus basilensis FW507-4G11 0.33 RR42_RS28960 acyl-CoA hydrolase 0.62 RR42_RS11260 Methylisocitrate lyase (EC 4.1.3.30) (from data) low > 128
Pseudomonas simiae WCS417 0.33 PS417_28260 VdlD 0.63 PS417_21080 2-methylisocitrate lyase — —
Herbaspirillum seropedicae SmR1 0.33 HSERO_RS13415 VdlD 0.63 HSERO_RS15660 2-methylisocitrate lyase — —
Pseudomonas sp. RS175 0.33 PFR28_04527 hypothetical protein 0.64 PFR28_02928 2-methylisocitrate lyase low > 88
Pseudomonas sp. DMC3 0.33 GFF516 hypothetical protein 0.63 GFF5230 2-methylisocitrate lyase low > 89
Pseudomonas fluorescens FW300-N1B4 0.33 Pf1N1B4_2001 cytosolic long-chain acyl-CoA thioester hydrolase family protein 0.63 Pf1N1B4_3819 Methylisocitrate lyase (EC 4.1.3.30) low > 87
Pseudomonas fluorescens SBW25-INTG 0.33 PFLU_RS29920 acyl-CoA thioesterase 0.62 PFLU_RS22690 methylisocitrate lyase low > 109
Pseudomonas fluorescens SBW25 0.33 PFLU_RS29920 acyl-CoA thioesterase 0.62 PFLU_RS22690 methylisocitrate lyase low > 109
Pseudomonas fluorescens FW300-N2C3 0.33 AO356_11970 acyl-CoA hydrolase 0.64 AO356_20865 2-methylisocitrate lyase low > 104
Pseudomonas sp. SVBP6 0.33 COO64_RS01865 acyl-CoA thioesterase 0.63 COO64_RS09900 prpB methylisocitrate lyase low > 93
Pseudomonas lactucae CFBP13502 0.33 GEMAOFIL_00120 hypothetical protein 0.62 GEMAOFIL_04361 2-methylisocitrate lyase low > 93
Marinobacter adhaerens HP15 0.32 HP15_1435 thioesterase superfamily protein 0.68 HP15_1932 methylisocitrate lyase 2 — —
Pseudomonas fluorescens FW300-N2E2 0.31 Pf6N2E2_4269 cytosolic long-chain acyl-CoA thioester hydrolase family protein 0.63 Pf6N2E2_6061 Methylisocitrate lyase (EC 4.1.3.30) (from data) low > 103
Pseudomonas aeruginosa PA14 0.31 IKLFDK_25815 acyl-CoA thioesterase 0.65 IKLFDK_03445 methylisocitrate lyase low > 100
Hydrogenophaga sp. GW460-11-11-14-LB1 0.31 GFF2680 cytosolic long-chain acyl-CoA thioester hydrolase family protein 0.30 GFF3032 Methylisocitrate lyase (EC 4.1.3.30) — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.31 Psyr_5069 Thioesterase superfamily 0.62 Psyr_2085 methylisocitrate lyase 0.38 50
Pseudomonas syringae pv. syringae B728a 0.31 Psyr_5069 Thioesterase superfamily 0.62 Psyr_2085 methylisocitrate lyase low > 86
Pseudomonas sp. BP01 0.27 JOY50_RS08715 acyl-CoA thioesterase 0.63 JOY50_RS25750 prpB methylisocitrate lyase low > 84
Pseudomonas putida KT2440 0.27 PP_5356 Protein VdlD 0.63 PP_2334 2-methylisocitrate lyase low > 96

Not shown: 7 genomes with orthologs for CSW01_18835 only; 32 genomes with orthologs for CSW01_06735 only