Conservation of cofitness between CSW01_02415 and CSW01_05000 in Vibrio cholerae E7946 ATCC 55056

59 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_02415 tRNA (guanosine(46)-N7)-methyltransferase TrmB 1.0 CSW01_05000 short-chain dehydrogenase 0.45 16
Erwinia amylovora T8 0.70 OLJFJH_08500 tRNA (guanosine(46)-N7)-methyltransferase TrmB 0.39 OLJFJH_17680 SDR family oxidoreductase low > 58
Escherichia coli ECRC102 0.70 NIAGMN_16970 trmB tRNA (guanosine(46)-N7)-methyltransferase TrmB 0.39 NIAGMN_06030 ybbO NADP(+)-dependent aldehyde reductase — —
Escherichia coli ECRC99 0.70 KEDOAH_08935 trmB tRNA (guanosine(46)-N7)-methyltransferase TrmB 0.39 KEDOAH_19990 ybbO NADP(+)-dependent aldehyde reductase — —
Pantoea sp. MT58 0.70 IAI47_03565 tRNA (guanosine(46)-N7)-methyltransferase TrmB 0.43 IAI47_14375 SDR family oxidoreductase low > 76
Escherichia coli ECRC98 0.70 JDDGAC_22835 trmB tRNA (guanosine(46)-N7)-methyltransferase TrmB 0.39 JDDGAC_11625 ybbO NADP(+)-dependent aldehyde reductase 0.91 2
Escherichia coli ECRC101 0.70 MCAODC_09725 trmB tRNA (guanosine(46)-N7)-methyltransferase TrmB 0.39 MCAODC_27195 ybbO NADP(+)-dependent aldehyde reductase low > 87
Escherichia coli ECRC100 0.70 OKFHMN_19205 trmB tRNA (guanosine(46)-N7)-methyltransferase TrmB 0.39 OKFHMN_07980 ybbO NADP(+)-dependent aldehyde reductase low > 80
Escherichia coli ECOR27 0.70 NOLOHH_11065 trmB tRNA (guanosine(46)-N7)-methyltransferase TrmB 0.39 NOLOHH_00970 ybbO NADP(+)-dependent aldehyde reductase low > 75
Escherichia coli ECRC62 0.70 BNILDI_09650 trmB tRNA (guanosine(46)-N7)-methyltransferase TrmB 0.39 BNILDI_22390 ybbO NADP(+)-dependent aldehyde reductase low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.70 OHPLBJKB_00756 tRNA (guanine-N(7)-)-methyltransferase 0.39 OHPLBJKB_03181 hypothetical protein low > 73
Escherichia coli BW25113 0.70 b2960 yggH tRNA(m7G46)-methyltransferase (NCBI) 0.39 b0493 ybbO short chain dehydrogenase (NCBI) low > 76
Escherichia coli BL21 0.70 ECD_02790 tRNA m(7)G46 methyltransferase, SAM-dependent 0.39 ECD_00444 putative oxidoreductase low > 61
Serratia liquefaciens MT49 0.69 IAI46_21460 tRNA (guanosine(46)-N7)-methyltransferase TrmB 0.41 IAI46_05340 SDR family oxidoreductase low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.69 GFF3064 tRNA (guanine46-N7-)-methyltransferase (EC 2.1.1.33) 0.39 GFF4411 Putative NAD(P)-dependent oxidoreductase EC-YbbO low > 78
Escherichia fergusonii Becca 0.69 EFB2_00942 tRNA (guanine-N(7)-)-methyltransferase 0.39 EFB2_03562 hypothetical protein low > 86
Escherichia coli Nissle 1917 0.69 ECOLIN_RS16465 tRNA (guanosine(46)-N7)-methyltransferase TrmB 0.39 ECOLIN_RS02915 NADP(+)-dependent aldehyde reductase low > 55
Escherichia coli ECOR38 0.69 HEPCGN_18475 trmB tRNA (guanosine(46)-N7)-methyltransferase TrmB 0.39 HEPCGN_06610 ybbO NADP(+)-dependent aldehyde reductase low > 87
Erwinia tracheiphila SCR3 0.69 LU632_RS05425 trmB tRNA (guanosine(46)-N7)-methyltransferase TrmB 0.41 LU632_RS15270 SDR family oxidoreductase low > 74
Enterobacter asburiae PDN3 0.69 EX28DRAFT_2997 tRNA (guanine-N(7)-)-methyltransferase 0.40 EX28DRAFT_2466 Short-chain dehydrogenases of various substrate specificities — —
Enterobacter sp. TBS_079 0.69 MPMX20_03817 tRNA (guanine-N(7)-)-methyltransferase 0.40 MPMX20_01091 hypothetical protein low > 85
Dickeya dadantii 3937 0.69 DDA3937_RS04905 tRNA (guanosine(46)-N7)-methyltransferase TrmB 0.44 DDA3937_RS05955 SDR family oxidoreductase low > 74
Klebsiella michiganensis M5al 0.68 BWI76_RS24150 tRNA (guanosine(46)-N7)-methyltransferase TrmB 0.40 BWI76_RS06940 short-chain dehydrogenase/reductase — —
Dickeya dianthicola 67-19 0.68 HGI48_RS04915 tRNA (guanosine(46)-N7)-methyltransferase TrmB 0.42 HGI48_RS06005 SDR family oxidoreductase low > 71
Dickeya dianthicola ME23 0.68 DZA65_RS05250 tRNA (guanosine(46)-N7)-methyltransferase TrmB 0.42 DZA65_RS06350 SDR family oxidoreductase low > 75
Pectobacterium carotovorum WPP14 0.67 HER17_RS16620 tRNA (guanosine(46)-N7)-methyltransferase TrmB 0.44 HER17_RS15505 SDR family oxidoreductase low > 75
Rahnella sp. WP5 0.66 EX31_RS02730 tRNA (guanosine(46)-N7)-methyltransferase TrmB 0.40 EX31_RS22600 SDR family oxidoreductase low > 89
Pseudomonas sp. RS175 0.56 PFR28_04251 tRNA (guanine-N(7)-)-methyltransferase 0.23 PFR28_03569 3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase — —
Pseudomonas sp. BP01 0.56 JOY50_RS20865 trmB tRNA (guanosine(46)-N7)-methyltransferase TrmB 0.21 JOY50_RS15415 SDR family oxidoreductase low > 84
Pseudomonas putida KT2440 0.56 PP_5103 tRNA (guanine-N(7)-)-methyltransferase 0.21 PP_1274 Oxidoreductase, short-chain dehydrogenase/reductase family low > 96
Pseudomonas sp. DMC3 0.56 GFF218 tRNA (guanine-N(7)-)-methyltransferase 0.23 GFF1908 hypothetical protein — —
Pseudomonas fluorescens SBW25 0.56 PFLU_RS28415 tRNA (guanosine(46)-N7)-methyltransferase TrmB 0.22 PFLU_RS04840 SDR family oxidoreductase low > 109
Pseudomonas fluorescens SBW25-INTG 0.56 PFLU_RS28415 tRNA (guanosine(46)-N7)-methyltransferase TrmB 0.22 PFLU_RS04840 SDR family oxidoreductase low > 109
Pseudomonas fluorescens GW456-L13 0.55 PfGW456L13_1001 tRNA (guanine46-N7-)-methyltransferase (EC 2.1.1.33) 0.22 PfGW456L13_1672 Oxidoreductase, short chain dehydrogenase/reductase family low > 87
Pseudomonas fluorescens FW300-N2C3 0.55 AO356_13380 tRNA (guanine-N7)-methyltransferase 0.24 AO356_17250 short-chain dehydrogenase low > 104
Pseudomonas fluorescens FW300-N2E2 0.55 Pf6N2E2_4591 tRNA (guanine46-N7-)-methyltransferase (EC 2.1.1.33) 0.23 Pf6N2E2_5375 Oxidoreductase, short chain dehydrogenase/reductase family low > 103
Pseudomonas fluorescens FW300-N1B4 0.55 Pf1N1B4_2332 tRNA (guanine46-N7-)-methyltransferase (EC 2.1.1.33) 0.22 Pf1N1B4_996 Oxidoreductase, short chain dehydrogenase/reductase family — —
Pseudomonas simiae WCS417 0.55 PS417_26770 tRNA (guanine-N7)-methyltransferase 0.23 PS417_04775 short-chain dehydrogenase low > 88
Pseudomonas fluorescens FW300-N2E3 0.55 AO353_08210 tRNA (guanine-N7)-methyltransferase 0.22 AO353_04800 short-chain dehydrogenase low > 101
Pseudomonas syringae pv. syringae B728a ΔmexB 0.55 Psyr_4739 tRNA (guanine-N(7)-)-methyltransferase 0.22 Psyr_1049 Short-chain dehydrogenase/reductase SDR low > 86
Pseudomonas syringae pv. syringae B728a 0.55 Psyr_4739 tRNA (guanine-N(7)-)-methyltransferase 0.22 Psyr_1049 Short-chain dehydrogenase/reductase SDR low > 86
Pseudomonas aeruginosa PA14 0.54 IKLFDK_23515 tRNA (guanosine(46)-N7)-methyltransferase TrmB 0.22 IKLFDK_17075 short-chain dehydrogenase low > 101
Pseudomonas sp. S08-1 0.54 OH686_14290 tRNA (guanine-N(7)-)-methyltransferase 0.48 OH686_04825 Oxidoreductase, short-chain dehydrogenase/reductase family low > 80
Marinobacter adhaerens HP15 0.53 HP15_278 tRNA (guanine-N(7)-)-methyltransferase 0.18 HP15_1587 oxidoreductase, short-chain dehydrogenase/reductase family protein low > 73
Paraburkholderia sabiae LMG 24235 0.49 QEN71_RS03220 tRNA (guanosine(46)-N7)-methyltransferase TrmB 0.24 QEN71_RS06595 oxidoreductase low > 153
Paraburkholderia graminis OAS925 0.49 ABIE53_003260 tRNA (guanine-N7-)-methyltransferase 0.27 ABIE53_005687 NAD(P)-dependent dehydrogenase (short-subunit alcohol dehydrogenase family) low > 113
Paraburkholderia bryophila 376MFSha3.1 0.49 H281DRAFT_04036 tRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.33) 0.20 H281DRAFT_03657 Short-chain dehydrogenase low > 103
Burkholderia phytofirmans PsJN 0.48 BPHYT_RS15470 tRNA (guanine-N(7)-)-methyltransferase 0.23 BPHYT_RS10170 oxidoreductase low > 109
Ralstonia solanacearum UW163 0.46 UW163_RS00810 tRNA (guanosine(46)-N7)-methyltransferase TrmB 0.21 UW163_RS18290 oxidoreductase — —
Ralstonia solanacearum IBSBF1503 0.46 RALBFv3_RS12755 tRNA (guanosine(46)-N7)-methyltransferase TrmB 0.21 RALBFv3_RS16935 oxidoreductase low > 76
Ralstonia solanacearum PSI07 0.46 RPSI07_RS20505 tRNA (guanosine(46)-N7)-methyltransferase TrmB 0.23 RPSI07_RS06900 oxidoreductase low > 81
Ralstonia solanacearum GMI1000 0.45 RS_RS03535 tRNA (guanosine(46)-N7)-methyltransferase TrmB 0.22 RS_RS19935 oxidoreductase low > 80
Dyella japonica UNC79MFTsu3.2 0.43 ABZR86_RS11650 tRNA (guanosine(46)-N7)-methyltransferase TrmB 0.28 ABZR86_RS17700 oxidoreductase low > 74
Dinoroseobacter shibae DFL-12 0.19 Dshi_1021 tRNA (guanine-N(7)-)-methyltransferase (RefSeq) 0.50 Dshi_0220 short-chain dehydrogenase/reductase SDR (RefSeq) low > 64
Rhizobium sp. OAE497 0.18 ABIE40_RS01670 tRNA (guanosine(46)-N7)-methyltransferase TrmB 0.47 ABIE40_RS17480 SDR family oxidoreductase low > 107
Agrobacterium fabrum C58 0.17 Atu0363 putative tRNA (guanine-N(7)-)-methyltransferase 0.46 Atu3591 short chain dehydrogenase low > 89
Rhodopseudomonas palustris CGA009 0.16 TX73_002295 tRNA (guanine(46)-N(7))-methyltransferase TrmB 0.20 TX73_010500 SDR family oxidoreductase low > 86
Azospirillum sp. SherDot2 0.16 MPMX19_02518 tRNA (guanine-N(7)-)-methyltransferase 0.20 MPMX19_03857 3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase low > 112
Sinorhizobium meliloti 1021 0.15 SMc01108 tRNA (guanine-N(7)-)-methyltransferase 0.43 SMc00733 short chain dehydrogenase low > 103
Azospirillum brasilense Sp245 0.13 AZOBR_RS01440 tRNA (guanine-N(7)-)-methyltransferase 0.21 AZOBR_RS32755 short-chain dehydrogenase — —

Not shown: 30 genomes with orthologs for CSW01_02415 only; 8 genomes with orthologs for CSW01_05000 only