| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Vibrio cholerae E7946 ATCC 55056 | 1.0 | CSW01_07735 | | multidrug resistance protein NorM | 1.0 | CSW01_04040 | | ABC transporter ATP-binding protein | 0.70 | 10 |
| Pectobacterium carotovorum WPP14 | 0.55 | HER17_RS09220 | | MATE family efflux transporter | 0.51 | HER17_RS13335 | | ABC transporter ATP-binding protein | low | > 75 |
| Enterobacter sp. TBS_079 | 0.55 | MPMX20_01973 | | Multidrug resistance protein MdtK | 0.56 | MPMX20_01242 | | Ferric enterobactin transport ATP-binding protein FepC | low | > 85 |
| Serratia liquefaciens MT49 | 0.54 | IAI46_11210 | | MATE family efflux transporter | 0.58 | IAI46_18350 | | ATP-binding cassette domain-containing protein | low | > 86 |
| Escherichia coli Nissle 1917 | 0.54 | ECOLIN_RS09270 | | multidrug efflux MATE transporter MdtK | 0.55 | ECOLIN_RS03230 | | iron-enterobactin ABC transporter ATP-binding protein | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.54 | OHPLBJKB_02061 | | Multidrug resistance protein MdtK | 0.55 | OHPLBJKB_03118 | | Ferric enterobactin transport ATP-binding protein FepC | low | > 74 |
| Klebsiella michiganensis M5al | 0.54 | BWI76_RS16535 | | MATE family efflux transporter | 0.56 | BWI76_RS07720 | | iron-enterobactin transporter ATP-binding protein | — | — |
| Escherichia fergusonii Becca | 0.54 | EFB2_02329 | | Multidrug resistance protein MdtK | 0.55 | EFB2_03504 | | Ferric enterobactin transport ATP-binding protein FepC | low | > 86 |
| Escherichia coli BW25113 | 0.54 | b1663 | mdtK | multidrug efflux protein NorM (NCBI) | 0.55 | b0588 | fepC | iron-enterobactin transporter subunit (NCBI) | low | > 76 |
| Escherichia coli BL21 | 0.54 | ECD_01634 | | multidrug efflux system transporter | 0.55 | ECD_00555 | | ferrienterobactin ABC transporter ATPase | low | > 61 |
| Escherichia coli ECRC102 | 0.54 | NIAGMN_00705 | mdtK | multidrug efflux MATE transporter MdtK | 0.55 | NIAGMN_05655 | fepC | ferrienterobactin ABC transporter ATPase | low | > 80 |
| Escherichia coli ECRC98 | 0.54 | JDDGAC_01950 | mdtK | multidrug efflux MATE transporter MdtK | 0.55 | JDDGAC_11245 | fepC | ferrienterobactin ABC transporter ATPase | low | > 87 |
| Escherichia coli ECRC101 | 0.54 | MCAODC_18050 | mdtK | multidrug efflux MATE transporter MdtK | 0.55 | MCAODC_26815 | fepC | ferrienterobactin ABC transporter ATPase | low | > 88 |
| Escherichia coli ECRC99 | 0.54 | KEDOAH_00750 | mdtK | multidrug efflux MATE transporter MdtK | 0.55 | KEDOAH_20370 | fepC | ferrienterobactin ABC transporter ATPase | — | — |
| Escherichia coli ECRC100 | 0.54 | OKFHMN_27360 | mdtK | multidrug efflux MATE transporter MdtK | 0.55 | OKFHMN_07600 | fepC | ferrienterobactin ABC transporter ATPase | low | > 79 |
| Rahnella sp. WP5 | 0.54 | EX31_RS13855 | | MATE family efflux transporter | 0.56 | EX31_RS08240 | | ATP-binding cassette domain-containing protein | low | > 89 |
| Escherichia coli ECOR27 | 0.54 | NOLOHH_17880 | mdtK | multidrug efflux MATE transporter MdtK | 0.55 | NOLOHH_23975 | fepC | ferrienterobactin ABC transporter ATPase | low | > 76 |
| Escherichia coli ECOR38 | 0.54 | HEPCGN_05745 | mdtK | multidrug efflux MATE transporter MdtK | 0.55 | HEPCGN_00680 | fepC | ferrienterobactin ABC transporter ATPase | low | > 88 |
| Escherichia coli ECRC62 | 0.54 | BNILDI_16670 | mdtK | multidrug efflux MATE transporter MdtK | 0.55 | BNILDI_21985 | fepC | ferrienterobactin ABC transporter ATPase | low | > 75 |
| Klebsiella pneumoniae MKP103 | 0.54 | KDGMDA_23495 | | MdtK family multidrug efflux MATE transporter | 0.56 | KDGMDA_16075 | | iron-enterobactin transporter ATP-binding protein | low | > 95 |
| Enterobacter asburiae PDN3 | 0.54 | EX28DRAFT_1660 | | putative efflux protein, MATE family | 0.57 | EX28DRAFT_2379 | | ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components | low | > 76 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.53 | GFF3613 | | Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps | 0.55 | GFF4495 | | ABC-type Fe3+-siderophore transport system, ATPase component | — | — |
| Dickeya dianthicola 67-19 | 0.53 | HGI48_RS12700 | | MATE family efflux transporter | 0.64 | HGI48_RS14620 | | ABC transporter ATP-binding protein | low | > 71 |
| Dickeya dianthicola ME23 | 0.53 | DZA65_RS13155 | | MATE family efflux transporter | 0.64 | DZA65_RS15560 | | ABC transporter ATP-binding protein | low | > 75 |
| Pantoea agglomerans CFBP13505 P0401 | 0.52 | PagCFBP13505_RS17770 | | MATE family efflux transporter | 0.58 | PagCFBP13505_RS09205 | | ATP-binding cassette domain-containing protein | low | > 74 |
| Shewanella amazonensis SB2B | 0.48 | Sama_1761 | | MATE efflux family protein (RefSeq) | 0.26 | Sama_0760 | | iron-compound ABC transporter, ATP-binding protein, putative (RefSeq) | low | > 62 |
| Shewanella oneidensis MR-1 | 0.47 | SO2295 | | MATE efflux family protein (NCBI ptt file) | 0.29 | SO1033 | | iron-compound ABC transporter, ATP-binding protein, putative (NCBI ptt file) | low | > 76 |
| Pseudomonas segetis P6 | 0.44 | MPMX49_02327 | | Multidrug resistance protein NorM | 0.35 | MPMX49_02748 | | Petrobactin import ATP-binding protein FpuD | low | > 75 |
| Pseudomonas sp. DMC3 | 0.42 | GFF1263 | | Multidrug resistance protein NorM | 0.29 | GFF3057 | | Iron(3+)-hydroxamate import ATP-binding protein FhuC | low | > 89 |
| Pseudomonas simiae WCS417 | 0.42 | PS417_07530 | | multidrug transporter | 0.42 | PS417_18090 | | iron ABC transporter | low | > 88 |
| Pseudomonas fluorescens SBW25-INTG | 0.42 | PFLU_RS07610 | | MATE family efflux transporter | 0.42 | PFLU_RS19980 | | Fe(3+) dicitrate ABC transporter ATP-binding protein FecE | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.42 | PFLU_RS07610 | | MATE family efflux transporter | 0.42 | PFLU_RS19980 | | Fe(3+) dicitrate ABC transporter ATP-binding protein FecE | low | > 109 |
| Pseudomonas fluorescens FW300-N2C3 | 0.41 | AO356_02370 | | MATE family efflux transporter | 0.25 | AO356_16420 | | histidinol phosphatase | — | — |
| Pseudomonas fluorescens FW300-N2E3 | 0.40 | AO353_00550 | | MATE family efflux transporter | 0.28 | AO353_13560 | | histidinol phosphatase | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.40 | PfGW456L13_4049 | | Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps | 0.28 | PfGW456L13_78 | | ABC transporter (iron.B12.siderophore.hemin) , ATP-binding component | low | > 87 |
| Pseudomonas fluorescens FW300-N2E2 | 0.40 | Pf6N2E2_2298 | | Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps | 0.43 | Pf6N2E2_1635 | | ABC-type cobalamin/Fe3+-siderophores transport systems ATPase components | low | > 103 |
| Pseudomonas sp. RS175 | 0.40 | PFR28_01102 | | Multidrug resistance protein NorM | 0.27 | PFR28_05190 | | Fe(3+) dicitrate transport ATP-binding protein FecE | low | > 88 |
| Pseudomonas sp. SVBP6 | 0.40 | COO64_RS05190 | | MATE family efflux transporter | 0.27 | COO64_RS18205 | | ABC transporter ATP-binding protein | low | > 93 |
| Pseudomonas aeruginosa PA14 | 0.39 | IKLFDK_06480 | | proton-coupled multidrug efflux MATE transporter PmpM | 0.53 | IKLFDK_21410 | | Fe(3+)-dicitrate ABC transporter ATP-binding protein | low | > 100 |
| Burkholderia phytofirmans PsJN | 0.23 | BPHYT_RS09015 | | multidrug transporter MatE | 0.35 | BPHYT_RS20230 | | ABC transporter | — | — |
| Cupriavidus basilensis FW507-4G11 | 0.23 | RR42_RS13335 | | multidrug transporter MatE | 0.28 | RR42_RS16130 | | ABC transporter ATP-binding protein | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.21 | QEN71_RS22335 | | MATE family efflux transporter | 0.38 | QEN71_RS15825 | | ABC transporter ATP-binding protein | low | > 153 |
| Synechocystis sp000284455 PCC 6803 | 0.20 | SGL_RS14765 | | MATE family efflux transporter | 0.53 | SGL_RS01940 | | ABC transporter ATP-binding protein | low | > 52 |
| Agrobacterium fabrum C58 | 0.19 | Atu2172 | | multidrug efflux protein | 0.53 | Atu5316 | | ABC transporter nucleotide binding/ATPase (iron-siderophore) | — | — |
| Herbaspirillum seropedicae SmR1 | 0.19 | HSERO_RS04300 | | multidrug transporter MatE | 0.21 | HSERO_RS21910 | | iron ABC transporter ATP-binding protein | low | > 78 |
| Sinorhizobium meliloti 1021 | 0.19 | SMc01211 | | hypothetical protein | 0.52 | SMa1741 | | ABC transporter ATP-binding protein | — | — |
| Pseudomonas sp. BP01 | 0.19 | JOY50_RS09165 | | NorM family multidrug efflux MATE transporter | 0.26 | JOY50_RS10465 | | ABC transporter ATP-binding protein | low | > 84 |
| Rhodospirillum rubrum S1H | 0.19 | Rru_A0697 | | Multi antimicrobial extrusion protein MatE (NCBI) | 0.28 | Rru_A1138 | | ABC transporter component (NCBI) | low | > 58 |
| Synechococcus elongatus PCC 7942 | 0.19 | Synpcc7942_1699 | | MATE efflux family protein | 0.21 | Synpcc7942_2574 | mntA | ATPase | low | > 38 |
| Variovorax sp. OAS795 | 0.19 | ABID97_RS14630 | | MATE family efflux transporter | 0.22 | ABID97_RS17400 | | ABC transporter ATP-binding protein | — | — |
| Bosea sp. OAE506 | 0.18 | ABIE41_RS08515 | | MATE family efflux transporter | 0.25 | ABIE41_RS01470 | | ABC transporter ATP-binding protein | low | > 77 |
| Pseudomonas putida KT2440 | 0.18 | PP_5262 | | Probable multidrug resistance protein NorM | 0.27 | PP_2416 | | putative Iron ABC transporter, ATP-binding protein | low | > 96 |
| Pseudomonas syringae pv. syringae B728a | 0.18 | Psyr_0073 | | Multi antimicrobial extrusion protein MatE | 0.51 | Psyr_2593 | | ABC transporter | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.18 | Psyr_0073 | | Multi antimicrobial extrusion protein MatE | 0.51 | Psyr_2593 | | ABC transporter | low | > 86 |
| Rhizobium sp. OAE497 | 0.18 | ABIE40_RS12780 | | MATE family efflux transporter | 0.49 | ABIE40_RS05825 | | ABC transporter ATP-binding protein | low | > 107 |
| Sphingobium sp. HT1-2 | 0.17 | GFF1565 | | hypothetical protein | 0.29 | GFF311 | | Vitamin B12 ABC transporter, ATP-binding protein BtuD | low | > 95 |
| Phaeobacter inhibens DSM 17395 | 0.17 | PGA1_c21310 | | multidrug resistance protein NorM | 0.47 | PGA1_c25920 | | ferric enterobactin transport ATP-binding protein FepC | low | > 62 |
| Dinoroseobacter shibae DFL-12 | 0.17 | Dshi_0755 | | MATE efflux family protein (RefSeq) | 0.24 | Dshi_0560 | | ABC transporter related (RefSeq) | low | > 64 |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.09 | DVU1217 | | MATE efflux family protein (TIGR) | 0.25 | DVU0648 | fepC | iron compound ABC transporter, ATP-binding protein (TIGR) | low | > 55 |
| Sphingomonas koreensis DSMZ 15582 | 0.09 | Ga0059261_2291 | | putative efflux protein, MATE family | 0.28 | Ga0059261_0624 | | ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components | low | > 68 |
Not shown: 50 genomes with orthologs for CSW01_07735 only; 3 genomes with orthologs for CSW01_04040 only