| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
| Vibrio cholerae E7946 ATCC 55056 | 1.0 | CSW01_17300 | | molybdopterin-synthase adenylyltransferase MoeB | 1.0 | CSW01_03205 | | iron ABC transporter substrate-binding protein | 0.74 | 19 |
| Shewanella loihica PV-4 | 0.63 | Shew_0047 | | molybdopterin biosynthesis protein MoeB (RefSeq) | 0.66 | Shew_0861 | | extracellular solute-binding protein (RefSeq) | low | > 60 |
| Rahnella sp. WP5 | 0.59 | EX31_RS18770 | | molybdopterin-synthase adenylyltransferase MoeB | 0.43 | EX31_RS17570 | | extracellular solute-binding protein | low | > 89 |
| Shewanella oneidensis MR-1 | 0.56 | SO0137 | moeB | molybdopterin biosynthesis MoeB protein (NCBI ptt file) | 0.64 | SO0744 | | iron(III) ABC transporter, periplasmic iron(III)-binding protein (NCBI ptt file) | low | > 76 |
| Shewanella sp. ANA-3 | 0.56 | Shewana3_0130 | | molybdopterin biosynthesis protein MoeB (RefSeq) | 0.64 | Shewana3_3517 | | extracellular solute-binding protein (RefSeq) | low | > 73 |
| Pectobacterium carotovorum WPP14 | 0.55 | HER17_RS13520 | | molybdopterin-synthase adenylyltransferase MoeB | 0.43 | HER17_RS14365 | | Fe(3+) ABC transporter substrate-binding protein | low | > 75 |
| Shewanella amazonensis SB2B | 0.55 | Sama_0137 | | molybdopterin biosynthesis protein MoeB (RefSeq) | 0.67 | Sama_0666 | | iron(III) ABC transporter, periplasmic iron(III)-binding protein (RefSeq) | low | > 62 |
| Marinobacter adhaerens HP15 | 0.50 | HP15_714 | | molybdopterin synthase sulfurylase MoeB | 0.53 | HP15_1456 | | extracellular solute-binding protein, family 1 | — | — |
| Pseudomonas stutzeri RCH2 | 0.47 | Psest_1115 | | Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 | 0.34 | Psest_0179 | | ABC-type Fe3+ transport system, periplasmic component | — | — |
| Castellaniella sp019104865 MT123 | 0.47 | ABCV34_RS14285 | | HesA/MoeB/ThiF family protein | 0.44 | ABCV34_RS03555 | | Fe(3+) ABC transporter substrate-binding protein | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.47 | PfGW456L13_1584 | | Molybdopterin biosynthesis protein MoeB | 0.32 | PfGW456L13_900 | | Ferric iron ABC transporter, iron-binding protein | low | > 87 |
| Dechlorosoma suillum PS | 0.46 | Dsui_1268 | | dinucleotide-utilizing enzyme possibly involved in molybdopterin or thiamin biosynthesis | 0.36 | Dsui_2928 | | ABC-type Fe3+ transport system, periplasmic component | — | — |
| Pseudomonas aeruginosa PA14 | 0.46 | IKLFDK_00180 | | molybdopterin-synthase adenylyltransferase MoeB | 0.32 | IKLFDK_27385 | | putative binding protein component of ABC iron transporter PA5217 | — | — |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.45 | GFF1228 | | Sulfur carrier protein adenylyltransferase ThiF | 0.31 | GFF3827 | | Ferric iron ABC transporter, iron-binding protein | low | > 90 |
| Pseudomonas aeruginosa MRSN321 | 0.45 | PFGADD_04877 | moeB | Molybdopterin biosynthesis MoeB protein | 0.32 | PFGADD_05465 | | putative binding protein component of ABC iron transporter PA5217 | low | > 99 |
| Pseudomonas fluorescens FW300-N2E2 | 0.45 | Pf6N2E2_5223 | | Molybdopterin biosynthesis protein MoeB | 0.32 | Pf6N2E2_4483 | | Ferric iron ABC transporter, iron-binding protein | low | > 103 |
| Pseudomonas aeruginosa PUPa3 | 0.45 | NPBIFN_04938 | moeB | Molybdopterin biosynthesis MoeB protein | 0.32 | NPBIFN_05541 | | putative binding protein component of ABC iron transporter PA5217 | low | > 101 |
| Pseudomonas segetis P6 | 0.45 | ACVTMO_RS06630 | | molybdopterin-synthase adenylyltransferase MoeB | 0.32 | ACVTMO_RS22245 | | extracellular solute-binding protein | low | > 75 |
| Acidovorax sp. GW101-3H11 | 0.45 | Ac3H11_3854 | | Sulfur carrier protein adenylyltransferase ThiF | 0.33 | Ac3H11_2605 | | Ferric iron ABC transporter, iron-binding protein | — | — |
| Variovorax sp. SCN45 | 0.44 | GFF2567 | | Molybdopterin-synthase adenylyltransferase (EC 2.7.7.80) | 0.43 | GFF6762 | | Ferric iron ABC transporter, iron-binding protein | low | > 127 |
| Herbaspirillum seropedicae SmR1 | 0.44 | HSERO_RS00835 | | molybdopterin biosynthesis protein MoeB | 0.31 | HSERO_RS09445 | | iron deficiency-induced protein A | low | > 78 |
| Pseudomonas sp. SVBP6 | 0.43 | COO64_RS03240 | | molybdopterin-synthase adenylyltransferase MoeB | 0.34 | COO64_RS00970 | | extracellular solute-binding protein | low | > 91 |
| Pseudomonas fluorescens FW300-N2E3 | 0.43 | AO353_14795 | | molybdopterin-synthase adenylyltransferase | 0.31 | AO353_08745 | | iron ABC transporter substrate-binding protein | low | > 101 |
| Kangiella aquimarina DSM 16071 | 0.42 | B158DRAFT_1711 | | Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 | 0.31 | B158DRAFT_0540 | | ABC-type Fe3+ transport system, periplasmic component | — | — |
| Pseudomonas syringae pv. syringae B728a | 0.42 | Psyr_0951 | | UBA/THIF-type NAD/FAD binding fold:MoeZ/MoeB | 0.31 | Psyr_0244 | | extracellular solute-binding protein, family 1 | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.42 | Psyr_0951 | | UBA/THIF-type NAD/FAD binding fold:MoeZ/MoeB | 0.31 | Psyr_0244 | | extracellular solute-binding protein, family 1 | low | > 86 |
| Pseudomonas fluorescens FW300-N2C3 | 0.42 | AO356_16505 | | molybdopterin-synthase adenylyltransferase | 0.32 | AO356_13025 | | iron ABC transporter substrate-binding protein | 0.32 | 47 |
| Pseudomonas fluorescens FW300-N1B4 | 0.42 | Pf1N1B4_2921 | | Molybdopterin biosynthesis protein MoeB | 0.32 | Pf1N1B4_2232 | | Ferric iron ABC transporter, iron-binding protein | — | — |
| Pseudomonas sp. RS175 | 0.42 | PFR28_03653 | | Molybdopterin-synthase adenylyltransferase | 0.32 | PFR28_04318 | | putative binding protein component of ABC iron transporter | low | > 88 |
| Pseudomonas putida KT2440 | 0.41 | PP_0735 | | molybdopterin-synthase adenylyltransferase | 0.33 | PP_5196 | | putative iron(III)|iron ABC transporter, periplasmic iron-binding protein | low | > 96 |
| Pseudomonas sp. S08-1 | 0.41 | OH686_07900 | | Molybdopterin-synthase adenylyltransferase | 0.32 | OH686_11185 | | Ferric iron ABC transporter, iron-binding protein | low | > 80 |
| Cupriavidus basilensis FW507-4G11 | 0.41 | RR42_RS01815 | | molybdopterin biosynthesis protein MoeB | 0.35 | RR42_RS04335 | | iron deficiency-induced protein A | — | — |
| Variovorax sp. OAS795 | 0.40 | ABID97_RS07375 | | molybdopterin-synthase adenylyltransferase MoeB | 0.43 | ABID97_RS21255 | | Fe(3+) ABC transporter substrate-binding protein | low | > 91 |
| Pseudomonas fluorescens SBW25 | 0.40 | PFLU_RS03665 | | molybdopterin-synthase adenylyltransferase MoeB | 0.32 | PFLU_RS28925 | | extracellular solute-binding protein | low | > 109 |
| Pseudomonas simiae WCS417 | 0.40 | PS417_03615 | | molybdopterin-synthase adenylyltransferase | 0.32 | PS417_27265 | | iron ABC transporter substrate-binding protein | — | — |
| Pseudomonas fluorescens SBW25-INTG | 0.40 | PFLU_RS03665 | | molybdopterin-synthase adenylyltransferase MoeB | 0.32 | PFLU_RS28925 | | extracellular solute-binding protein | low | > 109 |
| Pseudomonas sp. BP01 | 0.40 | JOY50_RS19580 | | molybdopterin-synthase adenylyltransferase MoeB | 0.32 | JOY50_RS22425 | | extracellular solute-binding protein | low | > 84 |
| Pseudomonas sp. DMC3 | 0.39 | GFF4489 | | Molybdopterin-synthase adenylyltransferase | 0.31 | GFF312 | | putative binding protein component of ABC iron transporter | low | > 89 |
| Pseudomonas lactucae CFBP13502 | 0.39 | GEMAOFIL_00929 | | Molybdopterin-synthase adenylyltransferase | 0.32 | GEMAOFIL_05591 | | putative binding protein component of ABC iron transporter | low | > 96 |
| Pseudomonas protegens RBAN4 | 0.38 | FABNJH_25955 | moeB | Sulfur carrier protein moaD adenylyltransferase MoeB | 0.32 | FABNJH_30070 | | Iron ABC transporter substrate-binding protein | — | — |
| Sinorhizobium meliloti 1021 | 0.36 | SMc02864 | | molybdopterin biosynthesis protein MoeB | 0.52 | SMc00784 | | iron binding protein | low | > 103 |
| Rhodospirillum rubrum S1H | 0.35 | Rru_A3793 | | molybdopterin biosynthesis protein (NCBI) | 0.55 | Rru_A0769 | | extracellular solute-binding protein, family 1 (NCBI) | — | — |
| Xanthobacter sp. DMC5 | 0.34 | GFF974 | | putative adenylyltransferase/sulfurtransferase MoeZ | 0.43 | GFF361 | | Iron uptake protein A2 | — | — |
| Bosea sp. OAE506 | 0.33 | ABIE41_RS03340 | | molybdopterin-synthase adenylyltransferase MoeB | 0.43 | ABIE41_RS15170 | | extracellular solute-binding protein | — | — |
| Rhodopseudomonas palustris CGA009 | 0.33 | TX73_000445 | | molybdopterin-synthase adenylyltransferase MoeB | 0.47 | TX73_021525 | | Fe(3+) ABC transporter substrate-binding protein | — | — |
| Azospirillum brasilense Sp245 | 0.33 | AZOBR_RS01090 | | thiamine biosynthesis protein ThiF | 0.35 | AZOBR_RS03165 | | iron deficiency-induced protein A | low | > 97 |
| Rhizobium sp. OAE497 | 0.32 | ABIE40_RS00205 | | molybdopterin-synthase adenylyltransferase MoeB | 0.45 | ABIE40_RS21710 | | extracellular solute-binding protein | low | > 107 |
| Agrobacterium fabrum C58 | 0.32 | Atu0074 | | molybdopterin biosynthesis protein | 0.49 | Atu0202 | | ABC transporter, substrate binding protein (iron) | low | > 89 |
Not shown: 55 genomes with orthologs for CSW01_17300 only; 6 genomes with orthologs for CSW01_03205 only