Conservation of cofitness between CSW01_12245 and CSW01_02460 in Vibrio cholerae E7946 ATCC 55056

63 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_12245 bifunctional protein-disulfide isomerase/oxidoreductase DsbC 1.0 CSW01_02460 type IV pili twitching motility protein PilT 0.68 1
Shewanella loihica PV-4 0.37 Shew_0771 thiol:disulfide interchange protein DsbC (RefSeq) 0.74 Shew_1138 twitching motility protein (RefSeq) low > 60
Escherichia coli ECOR38 0.36 HEPCGN_18865 dsbC bifunctional protein-disulfide isomerase/oxidoreductase DsbC 0.45 HEPCGN_18565 yggR Uncharacterized protein YggR low > 88
Serratia liquefaciens MT49 0.36 IAI46_20725 bifunctional protein-disulfide isomerase/oxidoreductase DsbC 0.48 IAI46_21405 type IV pilus twitching motility protein PilT low > 86
Dickeya dianthicola ME23 0.36 DZA65_RS03490 bifunctional protein-disulfide isomerase/oxidoreductase DsbC 0.46 DZA65_RS18430 type IV pilus twitching motility protein PilT low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.36 GFF2990 Thiol:disulfide interchange protein DsbC 0.45 GFF3053 Twitching motility protein PilT low > 78
Dickeya dianthicola 67-19 0.36 HGI48_RS03445 bifunctional protein-disulfide isomerase/oxidoreductase DsbC 0.46 HGI48_RS17340 type IV pilus twitching motility protein PilT low > 71
Dickeya dadantii 3937 0.36 DDA3937_RS03305 bifunctional protein-disulfide isomerase/oxidoreductase DsbC 0.47 DDA3937_RS17295 type IV pilus twitching motility protein PilT low > 74
Escherichia coli BL21 0.36 ECD_02725 protein disulfide isomerase II 0.45 ECD_02780 putative PilT family AAA+ ATPase 0.60 6
Shewanella amazonensis SB2B 0.36 Sama_2738 thiol:disulfide interchange protein DsbC (RefSeq) 0.75 Sama_2476 twitching motility protein (RefSeq) low > 62
Escherichia coli HS(pFamp)R (ATCC 700891) 0.36 OHPLBJKB_00822 Thiol:disulfide interchange protein DsbC 0.44 OHPLBJKB_00766 putative protein YggR low > 74
Escherichia coli ECRC98 0.36 JDDGAC_23215 dsbC bifunctional protein-disulfide isomerase/oxidoreductase DsbC 0.45 JDDGAC_22890 yggR Uncharacterized protein YggR low > 87
Escherichia coli ECRC100 0.36 OKFHMN_19575 dsbC bifunctional protein-disulfide isomerase/oxidoreductase DsbC 0.45 OKFHMN_19260 yggR Uncharacterized protein YggR low > 79
Escherichia coli ECRC62 0.36 BNILDI_10030 dsbC bifunctional protein-disulfide isomerase/oxidoreductase DsbC 0.45 BNILDI_09710 yggR Uncharacterized protein YggR low > 75
Escherichia coli BW25113 0.36 b2893 dsbC protein disulfide isomerase II (NCBI) 0.45 b2950 yggR putative protein transport (VIMSS) low > 76
Escherichia coli ECOR27 0.36 NOLOHH_11500 dsbC bifunctional protein-disulfide isomerase/oxidoreductase DsbC 0.45 NOLOHH_11130 yggR Uncharacterized protein YggR low > 76
Erwinia tracheiphila SCR3 0.36 LU632_RS05980 dsbC bifunctional protein-disulfide isomerase/oxidoreductase DsbC 0.20 LU632_RS25695 traJ plasmid transfer ATPase TraJ low > 74
Escherichia coli ECRC102 0.36 NIAGMN_17340 dsbC bifunctional protein-disulfide isomerase/oxidoreductase DsbC 0.45 NIAGMN_17025 yggR Uncharacterized protein YggR low > 80
Erwinia tracheiphila HP pepo 2.2 0.36 IJEDHG_03190 dsbC bifunctional protein-disulfide isomerase/oxidoreductase DsbC 0.45 IJEDHG_03445 type IV pili twitching motility protein PilT low > 61
Erwinia amylovora T8 0.36 OLJFJH_08840 bifunctional protein-disulfide isomerase/oxidoreductase DsbC 0.42 OLJFJH_08535 type IV pili twitching motility protein PilT low > 58
Escherichia coli ECRC99 0.36 KEDOAH_08565 dsbC bifunctional protein-disulfide isomerase/oxidoreductase DsbC 0.45 KEDOAH_08880 yggR Uncharacterized protein YggR — —
Escherichia coli ECRC101 0.36 MCAODC_10095 dsbC bifunctional protein-disulfide isomerase/oxidoreductase DsbC 0.45 MCAODC_09780 yggR Uncharacterized protein YggR low > 88
Escherichia fergusonii Becca 0.35 EFB2_01008 Thiol:disulfide interchange protein DsbC 0.45 EFB2_00952 putative protein YggR low > 86
Escherichia coli Nissle 1917 0.35 ECOLIN_RS16120 bifunctional protein-disulfide isomerase/oxidoreductase DsbC 0.45 ECOLIN_RS16410 type IV pilus twitching motility protein PilT low > 55
Klebsiella pneumoniae MKP103 0.35 KDGMDA_04295 bifunctional protein-disulfide isomerase/oxidoreductase DsbC 0.46 KDGMDA_04610 twitching motility protein PilT low > 95
Shewanella oneidensis MR-1 0.34 SO0951 dsbC thiol:disulfide interchange protein DsbC (NCBI ptt file) 0.74 SO3351 pilT twitching motility protein PilT (NCBI ptt file) low > 76
Enterobacter asburiae PDN3 0.34 EX28DRAFT_2944 Protein-disulfide isomerase 0.45 EX28DRAFT_2988 pilus retraction protein PilT low > 76
Enterobacter sp. TBS_079 0.34 MPMX20_03752 Thiol:disulfide interchange protein DsbC 0.47 MPMX20_03808 putative protein YggR low > 85
Klebsiella michiganensis M5al 0.34 BWI76_RS23810 bifunctional protein-disulfide isomerase/oxidoreductase DsbC 0.44 BWI76_RS24095 twitching motility protein PilT low > 92
Pantoea agglomerans CFBP13505 P0401 0.34 PagCFBP13505_RS15875 bifunctional protein-disulfide isomerase/oxidoreductase DsbC 0.44 PagCFBP13505_RS16095 type IV pilus twitching motility protein PilT low > 74
Shewanella sp. ANA-3 0.34 Shewana3_3330 thiol:disulfide interchange protein DsbC (RefSeq) 0.74 Shewana3_1195 pilus retraction ATPase PilT (RefSeq) low > 73
Pantoea sp. MT58 0.33 IAI47_03825 bifunctional protein-disulfide isomerase/oxidoreductase DsbC 0.44 IAI47_03600 type IV pilus twitching motility protein PilT low > 76
Pectobacterium carotovorum WPP14 0.33 HER17_RS17885 bifunctional protein-disulfide isomerase/oxidoreductase DsbC 0.48 HER17_RS03815 type IV pilus twitching motility protein PilT low > 75
Alteromonas macleodii MIT1002 0.33 MIT1002_00787 Thiol:disulfide interchange protein DsbC precursor 0.72 MIT1002_03060 Twitching mobility protein low > 70
Rahnella sp. WP5 0.33 EX31_RS13475 bifunctional protein-disulfide isomerase/oxidoreductase DsbC 0.44 EX31_RS02680 type IV pilus twitching motility protein PilT low > 89
Kangiella aquimarina DSM 16071 0.30 B158DRAFT_2266 Protein-disulfide isomerase 0.70 B158DRAFT_0195 pilus retraction protein PilT low > 40
Pseudomonas sp. SVBP6 0.29 COO64_RS04930 dsbC bifunctional protein-disulfide isomerase/oxidoreductase DsbC 0.54 COO64_RS13005 type IV pilus twitching motility protein PilT low > 93
Pseudomonas syringae pv. syringae B728a ΔmexB 0.29 Psyr_1289 Glutaredoxin 0.67 Psyr_0478 pilus retraction ATPase PilT — —
Pseudomonas syringae pv. syringae B728a 0.29 Psyr_1289 Glutaredoxin 0.67 Psyr_0478 pilus retraction ATPase PilT — —
Pseudomonas sp. DMC3 0.29 GFF1988 Thiol:disulfide interchange protein DsbC 0.69 GFF208 Twitching mobility protein low > 89
Pseudomonas sp. S08-1 0.29 OH686_17755 Thiol:disulfide interchange protein DsbC 0.70 OH686_10970 Twitching motility protein PilT — —
Marinobacter adhaerens HP15 0.28 HP15_763 protein-disulfide isomerase 0.68 HP15_289 twitching motility protein PilT low > 73
Pseudomonas fluorescens FW300-N2E2 0.28 Pf6N2E2_3144 Thiol:disulfide interchange protein DsbC 0.69 Pf6N2E2_4602 Twitching motility protein PilT 0.21 102
Pseudomonas fluorescens FW300-N2C3 0.28 AO356_06380 protein-disulfide isomerase 0.69 AO356_13430 twitching motility protein PilT low > 104
Pseudomonas fluorescens FW300-N1B4 0.28 Pf1N1B4_3012 Thiol:disulfide interchange protein DsbC 0.69 Pf1N1B4_2343 Twitching motility protein PilT low > 87
Pseudomonas fluorescens GW456-L13 0.27 PfGW456L13_1722 Thiol:disulfide interchange protein DsbC 0.68 PfGW456L13_1012 Twitching motility protein PilT low > 87
Pseudomonas sp. BP01 0.27 JOY50_RS11705 thioredoxin fold domain-containing protein 0.50 JOY50_RS20915 type IV pilus twitching motility protein PilT low > 84
Pseudomonas segetis P6 0.27 MPMX49_01576 Thiol:disulfide interchange protein DsbC 0.69 MPMX49_00612 Twitching mobility protein — —
Pseudomonas fluorescens SBW25-INTG 0.27 PFLU_RS24555 thioredoxin fold domain-containing protein 0.64 PFLU_RS28365 type IV pilus twitching motility protein PilT low > 109
Pseudomonas lactucae CFBP13502 0.27 GEMAOFIL_04728 Thiol:disulfide interchange protein DsbC 0.65 GEMAOFIL_05481 Twitching mobility protein low > 93
Pseudomonas simiae WCS417 0.27 PS417_22890 protein-disulfide isomerase 0.63 PS417_26720 twitching motility protein PilT — —
Pseudomonas fluorescens SBW25 0.27 PFLU_RS24555 thioredoxin fold domain-containing protein 0.64 PFLU_RS28365 type IV pilus twitching motility protein PilT low > 109
Pseudomonas fluorescens FW300-N2E3 0.26 AO353_04360 protein-disulfide isomerase 0.68 AO353_08155 twitching motility protein PilT low > 101
Acinetobacter radioresistens SK82 0.22 MPMX26_00168 hypothetical protein 0.72 MPMX26_02405 Twitching mobility protein low > 36
Acidovorax sp. GW101-3H11 0.17 Ac3H11_4004 Thiol:disulfide interchange protein DsbC 0.65 Ac3H11_4473 Twitching motility protein PilT low > 79
Cupriavidus basilensis FW507-4G11 0.16 RR42_RS23895 hypothetical protein 0.64 RR42_RS17350 twitching motility protein PilT low > 128
Herbaspirillum seropedicae SmR1 0.16 HSERO_RS20955 thiol:disulfide interchange protein 0.47 HSERO_RS19000 twitching motility protein PilT low > 78
Variovorax sp. SCN45 0.15 GFF2132 Thiol:disulfide interchange protein DsbC 0.67 GFF3743 Twitching motility protein PilT low > 127
Variovorax sp. OAS795 0.15 ABID97_RS24795 DsbC family protein 0.67 ABID97_RS00255 type IV pilus twitching motility protein PilT low > 91
Dechlorosoma suillum PS 0.15 Dsui_1091 protein-disulfide isomerase 0.68 Dsui_0604 pilus retraction protein PilT 0.58 37
Methylophilus sp. DMC18 0.14 GFF273 putative thiol:disulfide interchange protein DsbC 0.68 GFF865 Twitching mobility protein low > 43
Ralstonia solanacearum IBSBF1503 0.14 RALBFv3_RS06540 thiol:disulfide interchange protein 0.66 RALBFv3_RS05570 type IV pili twitching motility protein PilT low > 76
Ralstonia solanacearum UW163 0.14 UW163_RS07085 thiol:disulfide interchange protein 0.66 UW163_RS08055 type IV pili twitching motility protein PilT — —
Ralstonia solanacearum GMI1000 0.13 RS_RS14490 thiol:disulfide interchange protein 0.65 RS_RS13430 type IV pili twitching motility protein PilT low > 80

Not shown: 4 genomes with orthologs for CSW01_12245 only; 21 genomes with orthologs for CSW01_02460 only