Conservation of cofitness between CSW01_03780 and CSW01_02060 in Vibrio cholerae E7946 ATCC 55056

68 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_03780 polyphosphate kinase 1 1.0 CSW01_02060 methionine synthase 0.56 3
Enterobacter asburiae PDN3 0.66 EX28DRAFT_0166 polyphosphate kinase 1 0.76 EX28DRAFT_4326 methionine synthase (B12-dependent) (EC 2.1.1.13) low > 76
Enterobacter sp. TBS_079 0.66 MPMX20_03356 Polyphosphate kinase 0.75 MPMX20_00235 Methionine synthase low > 85
Escherichia fergusonii Becca 0.66 EFB2_01397 Polyphosphate kinase 0.75 EFB2_04592 Methionine synthase low > 86
Escherichia coli ECRC102 0.66 NIAGMN_19570 ppk1 polyphosphate kinase 1 0.76 NIAGMN_10990 metH methionine synthase low > 80
Escherichia coli BW25113 0.66 b2501 ppk polyphosphate kinase (NCBI) 0.76 b4019 metH B12-dependent methionine synthase (NCBI) low > 76
Escherichia coli ECRC98 0.66 JDDGAC_25745 ppk1 polyphosphate kinase 1 0.75 JDDGAC_16865 metH methionine synthase low > 87
Escherichia coli ECRC100 0.66 OKFHMN_21800 ppk1 polyphosphate kinase 1 0.76 OKFHMN_13240 metH methionine synthase 0.66 42
Escherichia coli Nissle 1917 0.66 ECOLIN_RS14200 polyphosphate kinase 1 0.75 ECOLIN_RS23160 methionine synthase low > 55
Escherichia coli ECRC62 0.66 BNILDI_12260 ppk1 polyphosphate kinase 1 0.76 BNILDI_06140 metH methionine synthase low > 75
Escherichia coli ECRC99 0.66 KEDOAH_06420 ppk1 polyphosphate kinase 1 0.76 KEDOAH_14920 metH methionine synthase — —
Escherichia coli BL21 0.66 ECD_02393 polyphosphate kinase, component of RNA degradosome 0.76 ECD_03891 homocysteine-N5-methyltetrahydrofolate transmethylase, B12-dependent low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.66 OHPLBJKB_01225 Polyphosphate kinase 0.76 OHPLBJKB_04030 Methionine synthase low > 74
Escherichia coli ECOR27 0.66 NOLOHH_13450 ppk1 polyphosphate kinase 1 0.76 NOLOHH_05380 metH methionine synthase low > 75
Escherichia coli ECRC101 0.66 MCAODC_12330 ppk1 polyphosphate kinase 1 0.76 MCAODC_03740 metH methionine synthase low > 87
Escherichia coli ECOR38 0.66 HEPCGN_20965 ppk1 polyphosphate kinase 1 0.76 HEPCGN_11885 metH methionine synthase low > 88
Dickeya dianthicola ME23 0.65 DZA65_RS16045 polyphosphate kinase 1 0.75 DZA65_RS20250 methionine synthase low > 75
Dickeya dadantii 3937 0.65 DDA3937_RS15150 polyphosphate kinase 1 0.76 DDA3937_RS19040 methionine synthase low > 74
Dickeya dianthicola 67-19 0.65 HGI48_RS15225 polyphosphate kinase 1 0.75 HGI48_RS19130 methionine synthase low > 71
Klebsiella pneumoniae MRSN742743 0.65 GJGHJB_01339 ppk1 polyphosphate kinase 1 0.76 GJGHJB_04733 metH methionine synthase low > 83
Klebsiella pneumoniae MKP103 0.65 KDGMDA_27815 polyphosphate kinase 1 0.76 KDGMDA_10165 methionine synthase low > 94
Serratia liquefaciens MT49 0.65 IAI46_18915 polyphosphate kinase 1 0.75 IAI46_23155 methionine synthase low > 87
Rahnella sp. WP5 0.65 EX31_RS22680 polyphosphate kinase 1 0.75 EX31_RS11760 methionine synthase low > 89
Klebsiella michiganensis M5al 0.65 BWI76_RS20995 RNA degradosome polyphosphate kinase 0.76 BWI76_RS01685 methionine synthase low > 92
Pectobacterium carotovorum WPP14 0.65 HER17_RS06425 polyphosphate kinase 1 0.76 HER17_RS02310 methionine synthase low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.64 GFF2167 Polyphosphate kinase (EC 2.7.4.1) 0.76 GFF1358 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) low > 78
Pantoea sp. MT58 0.64 IAI47_05155 polyphosphate kinase 1 0.75 IAI47_17990 methionine synthase low > 76
Pantoea agglomerans CFBP13505 P0401 0.64 PagCFBP13516_RS05445 ppk1 polyphosphate kinase 1 0.75 PagCFBP13516_RS18235 metH methionine synthase low > 80
Shewanella sp. ANA-3 0.57 Shewana3_2417 polyphosphate kinase (RefSeq) 0.66 Shewana3_3282 metH B12-dependent methionine synthase (RefSeq) low > 73
Shewanella loihica PV-4 0.56 Shew_3079 polyphosphate kinase (RefSeq) 0.65 Shew_0710 metH B12-dependent methionine synthase (RefSeq) low > 60
Shewanella amazonensis SB2B 0.56 Sama_2011 polyphosphate kinase (RefSeq) 0.67 Sama_0758 metH B12-dependent methionine synthase (RefSeq) low > 62
Mucilaginibacter yixingensis YX-36 DSM 26809 0.41 ABZR88_RS04845 polyphosphate kinase 1 0.61 ABZR88_RS20930 methionine synthase 0.59 13
Pedobacter sp. GW460-11-11-14-LB5 0.40 CA265_RS09830 polyphosphate kinase 1 0.60 CA265_RS23440 methionine synthase low > 88
Parabacteroides merdae CL09T00C40 0.35 HMPREF1078_RS16770 RNA degradosome polyphosphate kinase 0.49 HMPREF1078_RS14955 methionine synthase low > 61
Pontibacter actiniarum KMM 6156, DSM 19842 0.35 CA264_15725 polyphosphate kinase 1 0.60 CA264_16785 methionine synthase low > 74
Dechlorosoma suillum PS 0.30 Dsui_2814 polyphosphate kinase 1 0.63 Dsui_0779 5-methyltetrahydrofolate--homocysteine methyltransferase — —
Acinetobacter radioresistens SK82 0.29 MPMX26_02335 Polyphosphate kinase 0.62 MPMX26_02351 Methionine synthase low > 36
Kangiella aquimarina DSM 16071 0.28 B158DRAFT_2312 polyphosphate kinase 1 0.66 B158DRAFT_2466 methionine synthase (B12-dependent) (EC 2.1.1.13) low > 40
Acinetobacter baumannii LAC-4 0.28 RR41_RS08880 polyphosphate kinase 1 0.62 RR41_RS08790 methionine synthase low > 55
Pseudomonas sp. S08-1 0.28 OH686_13995 polyphosphate kinase 1 0.65 OH686_03335 methionine synthase low > 80
Herbaspirillum seropedicae SmR1 0.28 HSERO_RS06305 polyphosphate kinase 0.61 HSERO_RS21740 methionine synthase 0.26 40
Pseudomonas aeruginosa PA14 0.28 IKLFDK_27250 polyphosphate kinase 1 0.66 IKLFDK_08975 methionine synthase low > 98
Pseudomonas aeruginosa MRSN321 0.28 PFGADD_05492 ppk1 polyphosphate kinase 1 0.66 PFGADD_03281 metH methionine synthase low > 99
Pseudomonas aeruginosa PUPa3 0.28 NPBIFN_05568 ppk1 polyphosphate kinase 1 0.66 NPBIFN_03317 metH methionine synthase low > 101
Pseudomonas sp. SVBP6 0.27 COO64_RS01080 ppk1 polyphosphate kinase 1 0.64 COO64_RS24910 metH methionine synthase low > 91
Pseudomonas fluorescens GW456-L13 0.27 PfGW456L13_874 Polyphosphate kinase (EC 2.7.4.1) 0.64 PfGW456L13_2847 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) low > 87
Pseudomonas sp. DMC3 0.27 GFF336 Polyphosphate kinase 0.65 GFF3687 Methionine synthase 0.76 79
Pseudomonas sp. BP01 0.27 JOY50_RS22545 ppk1 polyphosphate kinase 1 0.65 JOY50_RS10720 metH methionine synthase 0.74 41
Pseudomonas segetis P6 0.27 ACVTMO_RS22345 ppk1 polyphosphate kinase 1 0.65 ACVTMO_RS12855 metH methionine synthase low > 75
Pseudomonas putida KT2440 0.27 PP_5217 Polyphosphate kinase 0.65 PP_2375 cobalamin-dependent methionine synthase 0.38 9
Pseudomonas stutzeri RCH2 0.27 Psest_3732 polyphosphate kinase 1 0.66 Psest_2102 5-methyltetrahydrofolate--homocysteine methyltransferase low > 67
Pseudomonas fluorescens FW300-N2E3 0.27 AO353_08885 polyphosphate kinase 0.64 AO353_21615 methionine synthase low > 101
Pseudomonas fluorescens SBW25 0.27 PFLU_RS29095 polyphosphate kinase 1 0.65 PFLU_RS13000 methionine synthase 0.63 104
Pseudomonas fluorescens SBW25-INTG 0.27 PFLU_RS29095 polyphosphate kinase 1 0.65 PFLU_RS13000 methionine synthase low > 109
Pseudomonas fluorescens FW300-N1B4 0.27 Pf1N1B4_2208 Polyphosphate kinase (EC 2.7.4.1) 0.64 Pf1N1B4_5661 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) low > 87
Pseudomonas syringae pv. syringae B728a ΔmexB 0.27 Psyr_0293 Polyphosphate kinase 0.64 Psyr_2464 methionine synthase (B12-dependent) low > 86
Pseudomonas lactucae CFBP13502 0.27 GEMAOFIL_05622 Polyphosphate kinase 0.64 GEMAOFIL_02709 Methionine synthase low > 96
Pseudomonas simiae WCS417 0.27 PS417_27435 polyphosphate kinase 0.64 PS417_12310 methionine synthase 0.39 47
Pseudomonas syringae pv. syringae B728a 0.27 Psyr_0293 Polyphosphate kinase 0.64 Psyr_2464 methionine synthase (B12-dependent) 0.46 41
Pseudomonas protegens RBAN4 0.27 FABNJH_30185 ppk1 polyphosphate kinase 1 0.65 FABNJH_18805 metH methionine synthase — —
Pseudomonas fluorescens FW300-N2E2 0.27 Pf6N2E2_4453 Polyphosphate kinase (EC 2.7.4.1) 0.64 Pf6N2E2_2068 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) low > 103
Pseudomonas fluorescens FW300-N2C3 0.27 AO356_12895 polyphosphate kinase 0.64 AO356_00545 methionine synthase low > 104
Pseudomonas sp. RS175 0.27 PFR28_04345 Polyphosphate kinase 0.64 PFR28_01369 Methionine synthase low > 88
Xanthobacter sp. DMC5 0.27 GFF3542 Polyphosphate kinase 0.61 GFF4146 Methionine synthase — —
Agrobacterium fabrum C58 0.26 Atu1144 polyphosphate kinase 0.59 Atu2155 methionine synthase — —
Castellaniella sp019104865 MT123 0.26 ABCV34_RS15580 polyphosphate kinase 1 0.57 ABCV34_RS14560 methionine synthase low > 48
Rhizobium sp. OAE497 0.26 ABIE40_RS06575 RNA degradosome polyphosphate kinase 0.59 ABIE40_RS12135 methionine synthase low > 107
Rhodopseudomonas palustris CGA009 0.25 TX73_015770 RNA degradosome polyphosphate kinase 0.60 TX73_019180 methionine synthase low > 86
Sinorhizobium meliloti 1021 0.25 SMc00618 polyphosphate kinase 0.59 SMc03112 B12-dependent methionine synthase low > 103

Not shown: 40 genomes with orthologs for CSW01_03780 only; 4 genomes with orthologs for CSW01_02060 only