Conservation of cofitness between CSW01_02205 and CSW01_01980 in Vibrio cholerae E7946 ATCC 55056

67 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_02205 ribonuclease E/G 1.0 CSW01_01980 transcriptional regulator Zur 0.77 16
Klebsiella michiganensis M5al 0.81 BWI76_RS25480 ribonuclease E/G 0.44 BWI76_RS01890 transcriptional regulator Zur low > 92
Klebsiella pneumoniae MKP103 0.81 KDGMDA_06255 ribonuclease G 0.44 KDGMDA_10345 zinc uptake transcriptional repressor Zur 0.46 45
Klebsiella pneumoniae MRSN742743 0.81 GJGHJB_00461 rng ribonuclease G 0.44 GJGHJB_04705 zur zinc uptake transcriptional repressor Zur low > 83
Dickeya dadantii 3937 0.80 DDA3937_RS01450 ribonuclease G 0.46 DDA3937_RS02765 zinc uptake transcriptional repressor Zur low > 74
Escherichia coli ECRC102 0.80 NIAGMN_15505 rng ribonuclease G 0.45 NIAGMN_10800 zur zinc uptake transcriptional repressor Zur 0.48 76
Escherichia coli ECOR27 0.80 NOLOHH_09530 rng ribonuclease G 0.45 NOLOHH_05205 zur zinc uptake transcriptional repressor Zur low > 75
Escherichia coli ECOR38 0.80 HEPCGN_16610 rng ribonuclease G 0.45 HEPCGN_11570 zur zinc uptake transcriptional repressor Zur low > 88
Escherichia coli ECRC99 0.80 KEDOAH_10405 rng ribonuclease G 0.45 KEDOAH_15110 zur zinc uptake transcriptional repressor Zur — —
Escherichia coli ECRC100 0.80 OKFHMN_17745 rng ribonuclease G 0.45 OKFHMN_13050 zur zinc uptake transcriptional repressor Zur low > 79
Escherichia coli ECRC101 0.80 MCAODC_08265 rng ribonuclease G 0.45 MCAODC_03550 zur zinc uptake transcriptional repressor Zur low > 87
Escherichia coli BW25113 0.80 b3247 cafA bundles of cytoplasmic filaments (VIMSS) 0.45 b4046 yjbK putative regulator (VIMSS) low > 76
Escherichia fergusonii Becca 0.80 EFB2_00584 Ribonuclease G 0.45 EFB2_04557 Zinc uptake regulation protein 0.53 14
Escherichia coli ECRC98 0.80 JDDGAC_21370 rng ribonuclease G 0.45 JDDGAC_16675 zur zinc uptake transcriptional repressor Zur 0.40 14
Escherichia coli BL21 0.80 ECD_03106 ribonuclease G 0.45 ECD_03918 transcriptional repressor, Zn(II)-binding low > 61
Escherichia coli ECRC62 0.80 BNILDI_01990 rng ribonuclease G 0.45 BNILDI_06315 zur zinc uptake transcriptional repressor Zur low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.80 OHPLBJKB_00458 Ribonuclease G 0.45 OHPLBJKB_03997 Zinc uptake regulation protein low > 74
Escherichia coli Nissle 1917 0.80 ECOLIN_RS18605 ribonuclease G 0.45 ECOLIN_RS23350 zinc uptake transcriptional repressor Zur low > 55
Dickeya dianthicola ME23 0.80 DZA65_RS01430 ribonuclease G 0.45 DZA65_RS02895 zinc uptake transcriptional repressor Zur low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.80 GFF2138 Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-) 0.45 GFF1416 Zinc uptake regulation protein ZUR low > 78
Dickeya dianthicola 67-19 0.80 HGI48_RS01370 ribonuclease G 0.45 HGI48_RS02740 zinc uptake transcriptional repressor Zur low > 71
Enterobacter sp. TBS_079 0.80 MPMX20_04153 Ribonuclease G 0.45 MPMX20_00262 Zinc uptake regulation protein low > 85
Enterobacter asburiae PDN3 0.80 EX28DRAFT_3297 ribonuclease, Rne/Rng family 0.46 EX28DRAFT_4266 Fe2+/Zn2+ uptake regulation proteins low > 76
Serratia liquefaciens MT49 0.80 IAI46_22700 ribonuclease G 0.45 IAI46_22990 zinc uptake transcriptional repressor Zur low > 87
Pectobacterium carotovorum WPP14 0.79 HER17_RS20150 ribonuclease G 0.48 HER17_RS18780 zinc uptake transcriptional repressor Zur low > 75
Rahnella sp. WP5 0.79 EX31_RS12255 ribonuclease G 0.46 EX31_RS11860 zinc uptake transcriptional repressor Zur low > 89
Erwinia amylovora T8 0.79 OLJFJH_06930 ribonuclease G 0.45 OLJFJH_03565 zinc uptake transcriptional repressor Zur low > 58
Erwinia tracheiphila HP pepo 2.2 0.79 IJEDHG_13580 rng ribonuclease G 0.47 IJEDHG_08440 zur zinc uptake transcriptional repressor Zur 0.60 41
Erwinia tracheiphila SCR3 0.79 LU632_RS21430 rng ribonuclease G 0.49 LU632_RS22295 zur zinc uptake transcriptional repressor Zur low > 73
Pantoea agglomerans CFBP13505 P0401 0.78 PagCFBP13516_RS02470 rng ribonuclease G 0.47 PagCFBP13516_RS18110 zur zinc uptake transcriptional repressor Zur low > 80
Pantoea sp. MT58 0.78 IAI47_02455 ribonuclease G 0.46 IAI47_17875 zinc uptake transcriptional repressor Zur low > 76
Alteromonas macleodii MIT1002 0.74 MIT1002_00224 Ribonuclease G 0.42 MIT1002_03799 Zinc uptake regulation protein low > 70
Marinobacter adhaerens HP15 0.57 HP15_2451 ribonuclease, Rne/Rng family 0.30 HP15_3521 zinc uptake regulation protein low > 73
Pseudomonas fluorescens SBW25 0.57 PFLU_RS04325 ribonuclease G 0.32 PFLU_RS00375 transcriptional repressor low > 109
Pseudomonas sp. DMC3 0.57 GFF1813 Ribonuclease G 0.32 GFF635 Zinc uptake regulation protein low > 89
Pseudomonas fluorescens SBW25-INTG 0.57 PFLU_RS04325 ribonuclease G 0.32 PFLU_RS00375 transcriptional repressor — —
Pseudomonas fluorescens FW300-N2C3 0.57 AO356_07110 ribonuclease G 0.33 AO356_11485 Fur family transcriptional regulator — —
Pseudomonas fluorescens FW300-N2E2 0.57 Pf6N2E2_3283 Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-) 0.34 Pf6N2E2_4166 Zinc uptake regulation protein ZUR — —
Pseudomonas orientalis W4I3 0.57 QF045_RS07260 ribonuclease G 0.33 QF045_RS03330 zinc uptake transcriptional repressor Zur low > 93
Pseudomonas simiae WCS417 0.57 PS417_04270 ribonuclease G 0.32 PS417_00385 Fur family transcriptional regulator low > 88
Pseudomonas aeruginosa PUPa3 0.57 NPBIFN_04740 rng ribonuclease G 0.33 NPBIFN_05835 zur zinc uptake transcriptional repressor Zur low > 101
Pseudomonas fluorescens FW300-N1B4 0.57 Pf1N1B4_1095 Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-) 0.32 Pf1N1B4_1871 Zinc uptake regulation protein ZUR 0.33 81
Pseudomonas sp. RS175 0.57 PFR28_00158 Ribonuclease G 0.34 PFR28_04620 Zinc uptake regulation protein low > 88
Pseudomonas aeruginosa PA14 0.57 IKLFDK_01695 ribonuclease G 0.33 IKLFDK_25915 zinc uptake transcriptional repressor Zur 0.36 16
Pseudomonas aeruginosa MRSN321 0.57 PFGADD_04681 rng ribonuclease G 0.33 PFGADD_05759 zur zinc uptake transcriptional repressor Zur low > 99
Pseudomonas lactucae CFBP13502 0.57 GEMAOFIL_01059 Ribonuclease G 0.31 GEMAOFIL_00280 Zinc uptake regulation protein — —
Pseudomonas putida KT2440 0.57 PP_0937 endoribonuclease G (RNAse G) 0.33 PP_0119 putative zinc uptake regulation protein ZUR low > 96
Paraburkholderia sabiae LMG 24235 0.57 QEN71_RS24430 ribonuclease G 0.39 QEN71_RS02580 Fur family transcriptional regulator low > 153
Pseudomonas fluorescens GW456-L13 0.57 PfGW456L13_5029 Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-) 0.33 PfGW456L13_598 Zinc uptake regulation protein ZUR low > 87
Pseudomonas stutzeri RCH2 0.56 Psest_3323 ribonuclease, Rne/Rng family 0.31 Psest_4308 Fe2+/Zn2+ uptake regulation proteins — —
Pseudomonas protegens RBAN4 0.56 FABNJH_04675 rng ribonuclease G 0.33 FABNJH_00400 zur zinc uptake transcriptional repressor Zur — —
Pseudomonas sp. BP01 0.56 JOY50_RS11055 rng ribonuclease G 0.33 JOY50_RS21130 zur zinc uptake transcriptional repressor Zur low > 84
Pseudomonas fluorescens FW300-N2E3 0.56 AO353_05230 ribonuclease G 0.32 AO353_10910 Fur family transcriptional regulator — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.56 Psyr_4159 RNAse G 0.31 Psyr_0276 zinc uptake regulation protein, putative low > 86
Pseudomonas sp. SVBP6 0.56 COO64_RS04210 rng ribonuclease G 0.33 COO64_RS02455 zur zinc uptake transcriptional repressor Zur — —
Pseudomonas syringae pv. syringae B728a 0.56 Psyr_4159 RNAse G 0.31 Psyr_0276 zinc uptake regulation protein, putative low > 86
Paraburkholderia bryophila 376MFSha3.1 0.56 H281DRAFT_04515 RNAse G 0.37 H281DRAFT_04161 ferric uptake regulator, Fur family low > 103
Pseudomonas sp. S08-1 0.56 OH686_08595 Ribonuclease G 0.32 OH686_12240 Zinc uptake regulation protein Zur low > 80
Burkholderia phytofirmans PsJN 0.56 BPHYT_RS06375 ribonuclease 0.38 BPHYT_RS16125 Fur family transcriptional regulator low > 109
Pseudomonas segetis P6 0.55 ACVTMO_RS19170 rng ribonuclease G 0.32 ACVTMO_RS01595 Fur family transcriptional regulator low > 75
Xanthomonas campestris pv. campestris strain 8004 0.55 Xcc-8004.1880.1 Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-) 0.36 Xcc-8004.1790.1 Zinc uptake regulation protein ZUR low > 74
Acinetobacter baumannii LAC-4 0.53 RR41_RS03605 ribonuclease G 0.31 RR41_RS18180 transcriptional repressor low > 55
Lysobacter sp. OAE881 0.53 ABIE51_RS06785 ribonuclease G 0.37 ABIE51_RS06205 transcriptional repressor — —
Acinetobacter radioresistens SK82 0.52 MPMX26_00646 Ribonuclease G 0.31 MPMX26_00095 Zinc uptake regulation protein low > 36
Castellaniella sp019104865 MT123 0.51 ABCV34_RS02480 ribonuclease G 0.34 ABCV34_RS13430 Fur family transcriptional regulator low > 48
Dyella japonica UNC79MFTsu3.2 0.51 ABZR86_RS21730 ribonuclease G 0.37 ABZR86_RS07900 transcriptional repressor low > 74
Rhodanobacter denitrificans MT42 0.50 LRK55_RS03155 ribonuclease G 0.38 LRK55_RS01420 transcriptional repressor low > 63
Rhodanobacter denitrificans FW104-10B01 0.50 LRK54_RS03405 ribonuclease G 0.38 LRK54_RS01640 transcriptional repressor low > 59

Not shown: 28 genomes with orthologs for CSW01_02205 only; 9 genomes with orthologs for CSW01_01980 only