Conservation of cofitness between CSW01_02215 and CSW01_01875 in Vibrio cholerae E7946 ATCC 55056

50 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_02215 carbon-nitrogen hydrolase family protein 1.0 CSW01_01875 hypothetical protein 0.69 7
Serratia liquefaciens MT49 0.49 IAI46_22690 carbon-nitrogen hydrolase family protein 0.66 IAI46_23490 transcriptional regulator low > 87
Pseudomonas sp. S08-1 0.45 OH686_08585 Uncharacterized subgroup of the nitrilase superfamily 0.14 OH686_07030 YheO-like PAS domain low > 80
Shewanella oneidensis MR-1 0.44 SO4092 hydrolase, carbon-nitrogen family (NCBI ptt file) 0.35 SO1402 conserved hypothetical protein (NCBI ptt file) low > 76
Pseudomonas aeruginosa PA14 0.43 IKLFDK_01705 carbon-nitrogen hydrolase 0.15 IKLFDK_19905 Transcriptional regulator DauR low > 98
Pseudomonas aeruginosa PUPa3 0.43 DQ20_RS56560 carbon-nitrogen hydrolase family protein 0.15 DQ20_RS48840 dauR;inference=COORDINATES transcriptional regulator DauR low > 101
Pseudomonas aeruginosa MRSN321 0.43 DY961_RS24100 carbon-nitrogen hydrolase family protein 0.15 DY961_RS13545 dauR;inference=COORDINATES transcriptional regulator DauR low > 100
Shewanella sp. ANA-3 0.42 Shewana3_3642 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (RefSeq) 0.35 Shewana3_2973 YheO domain-containing protein (RefSeq) low > 73
Pseudomonas sp. SVBP6 0.42 COO64_RS04220 carbon-nitrogen hydrolase family protein 0.15 COO64_RS25095 transcriptional regulator low > 93
Pseudomonas fluorescens GW456-L13 0.42 PfGW456L13_5027 FIG003879: Predicted amidohydrolase / Omega amidase (Nit2 homolog) 0.16 PfGW456L13_1693 YheO-like PAS domain low > 87
Pseudomonas simiae WCS417 0.42 PS417_04280 carbon-nitrogen hydrolase 0.15 PS417_12915 DNA-binding protein low > 88
Pseudomonas sp. DMC3 0.42 GFF1815 Deaminated glutathione amidase 0.15 GFF1929 Transcriptional regulator DauR low > 89
Pseudomonas sp. RS175 0.42 PFR28_00160 Deaminated glutathione amidase 0.13 PFR28_03547 Transcriptional regulator DauR low > 88
Pseudomonas fluorescens SBW25-INTG 0.41 PFLU_RS04335 carbon-nitrogen hydrolase family protein 0.15 PFLU_RS13585 DNA-binding protein low > 109
Pseudomonas fluorescens SBW25 0.41 PFLU_RS04335 carbon-nitrogen hydrolase family protein 0.15 PFLU_RS13585 DNA-binding protein low > 109
Pseudomonas fluorescens FW300-N2E3 0.41 AO353_05220 carbon-nitrogen hydrolase 0.16 AO353_04640 hypothetical protein low > 101
Pseudomonas fluorescens FW300-N2C3 0.41 AO356_07100 carbon-nitrogen hydrolase 0.14 AO356_17355 hypothetical protein low > 104
Pseudomonas putida KT2440 0.41 PP_0939 Carbon-nitrogen hydrolase family protein 0.16 PP_2931 conserved protein of unknown function low > 96
Pseudomonas fluorescens FW300-N2E2 0.41 Pf6N2E2_3281 FIG003879: Predicted amidohydrolase / Omega amidase (Nit2 homolog) 0.14 Pf6N2E2_5396 YheO-like PAS domain low > 103
Pseudomonas fluorescens FW300-N1B4 0.41 Pf1N1B4_1093 FIG003879: Predicted amidohydrolase / Omega amidase (Nit2 homolog) 0.15 Pf1N1B4_923 YheO-like PAS domain low > 87
Pseudomonas sp. BP01 0.40 JOY50_RS11065 carbon-nitrogen hydrolase family protein 0.16 JOY50_RS24520 transcriptional regulator low > 84
Paraburkholderia sabiae LMG 24235 0.38 QEN71_RS26550 carbon-nitrogen hydrolase family protein 0.15 QEN71_RS18565 PAS domain-containing protein low > 153
Paraburkholderia graminis OAS925 0.38 ABIE53_000852 putative amidohydrolase 0.12 ABIE53_005722 putative transcriptional regulator YheO low > 113
Burkholderia phytofirmans PsJN 0.38 BPHYT_RS03545 apolipoprotein acyltransferase 0.13 BPHYT_RS28105 hypothetical protein — —
Paraburkholderia bryophila 376MFSha3.1 0.37 H281DRAFT_04689 nitrilase 0.12 H281DRAFT_05884 Predicted transcriptional regulator YheO, contains PAS and DNA-binding HTH domains low > 103
Herbaspirillum seropedicae SmR1 0.36 HSERO_RS07150 apolipoprotein acyltransferase 0.14 HSERO_RS01425 DNA-binding protein low > 78
Sinorhizobium meliloti 1021 0.36 SMc02442 hydrolase 0.13 SMc04327 hypothetical protein low > 103
Cupriavidus basilensis FW507-4G11 0.36 RR42_RS05880 acyltransferase 0.14 RR42_RS11120 DNA-binding protein low > 128
Ralstonia solanacearum GMI1000 0.36 RS_RS13310 carbon-nitrogen hydrolase family protein 0.16 RS_RS24435 DNA-binding protein low > 80
Ralstonia solanacearum UW163 0.35 UW163_RS08175 carbon-nitrogen hydrolase family protein 0.16 UW163_RS17980 DNA-binding protein — —
Ralstonia solanacearum PSI07 0.35 RPSI07_RS11855 carbon-nitrogen hydrolase family protein 0.15 RPSI07_RS06825 DNA-binding protein low > 81
Acinetobacter baumannii LAC-4 0.35 RR41_RS15875 carbon-nitrogen hydrolase family protein 0.18 RR41_RS05440 PAS domain-containing protein low > 55
Ralstonia solanacearum IBSBF1503 0.35 RALBFv3_RS05450 carbon-nitrogen hydrolase family protein 0.16 RALBFv3_RS16625 DNA-binding protein low > 76
Variovorax sp. SCN45 0.35 GFF5445 FIG003879: Uncharacterized subgroup of the nitrilase superfamily 0.12 GFF2493 YheO-like PAS domain low > 127
Ralstonia sp. UNC404CL21Col 0.35 ABZR87_RS01100 carbon-nitrogen hydrolase family protein 0.15 ABZR87_RS17665 PAS domain-containing protein low > 80
Rhizobium sp. OAE497 0.34 ABIE40_RS17345 carbon-nitrogen hydrolase family protein 0.16 ABIE40_RS21180 PAS domain-containing protein low > 107
Acidovorax sp. GW101-3H11 0.29 Ac3H11_1207 FIG003879: Predicted amidohydrolase 0.15 Ac3H11_38 YheO-like PAS domain low > 79
Pantoea agglomerans CFBP13505 P0401 0.20 PagCFBP13505_RS03225 deaminated glutathione amidase 0.65 PagCFBP13505_RS21525 transcriptional regulator low > 74
Klebsiella michiganensis M5al 0.19 BWI76_RS07990 carbon-nitrogen hydrolase 0.64 BWI76_RS25905 hypothetical protein — —
Dickeya dianthicola 67-19 0.19 HGI48_RS19475 deaminated glutathione amidase 0.66 HGI48_RS19440 transcriptional regulator low > 71
Klebsiella pneumoniae MKP103 0.19 KDGMDA_16350 deaminated glutathione amidase 0.64 KDGMDA_06760 Uncharacterized protein YheO low > 95
Erwinia amylovora T8 0.19 OLJFJH_17270 deaminated glutathione amidase 0.66 OLJFJH_03930 Uncharacterized protein YheO low > 58
Pantoea sp. MT58 0.19 IAI47_14065 deaminated glutathione amidase 0.65 IAI47_02055 transcriptional regulator low > 76
Dickeya dadantii 3937 0.18 DDA3937_RS06130 deaminated glutathione amidase 0.66 DDA3937_RS19340 transcriptional regulator 0.38 44
Erwinia tracheiphila SCR3 0.18 LU632_RS16420 deaminated glutathione amidase 0.66 LU632_RS22710 transcriptional regulator low > 73
Erwinia tracheiphila HP pepo 2.2 0.18 IJEDHG_02515 deaminated glutathione amidase 0.66 IJEDHG_12210 Uncharacterized protein YheO — —
Dickeya dianthicola ME23 0.18 DZA65_RS06520 deaminated glutathione amidase 0.66 DZA65_RS20560 transcriptional regulator low > 75
Enterobacter asburiae PDN3 0.18 EX28DRAFT_2337 Predicted amidohydrolase 0.64 EX28DRAFT_4184 Uncharacterized protein conserved in bacteria low > 76
Rahnella sp. WP5 0.17 EX31_RS23065 deaminated glutathione amidase 0.66 EX31_RS04470 transcriptional regulator low > 89
Enterobacter sp. TBS_079 0.17 MPMX20_01285 Deaminated glutathione amidase 0.64 MPMX20_04239 Transcriptional regulator DauR low > 85
Pectobacterium carotovorum WPP14 0.17 HER17_RS17575 deaminated glutathione amidase 0.65 HER17_RS02010 transcriptional regulator low > 75

Not shown: 52 genomes with orthologs for CSW01_02215 only; 16 genomes with orthologs for CSW01_01875 only