| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Vibrio cholerae E7946 ATCC 55056 | 1.0 | CSW01_13525 | | DNA-binding transcriptional regulator CytR | 1.0 | CSW01_01285 | | perosamine synthetase | 0.91 | 8 |
| Rahnella sp. WP5 | 0.70 | EX31_RS14230 | | DNA-binding transcriptional regulator CytR | 0.24 | EX31_RS14020 | | UDP-4-amino-4-deoxy-L-arabinose aminotransferase | low | > 89 |
| Serratia liquefaciens MT49 | 0.69 | IAI46_24560 | | DNA-binding transcriptional regulator CytR | 0.25 | IAI46_11015 | | UDP-4-amino-4-deoxy-L-arabinose aminotransferase | low | > 86 |
| Klebsiella michiganensis M5al | 0.68 | BWI76_RS00765 | | DNA-binding transcriptional regulator CytR | 0.23 | BWI76_RS26485 | | UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase | low | > 92 |
| Enterobacter sp. TBS_079 | 0.68 | MPMX20_04535 | | HTH-type transcriptional repressor CytR | 0.24 | MPMX20_04380 | | UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase | low | > 85 |
| Klebsiella pneumoniae MKP103 | 0.67 | KDGMDA_09275 | | DNA-binding transcriptional regulator CytR | 0.24 | KDGMDA_07345 | | UDP-4-amino-4-deoxy-L-arabinose aminotransferase | low | > 95 |
| Enterobacter asburiae PDN3 | 0.67 | EX28DRAFT_4407 | | Transcriptional regulators | 0.24 | EX28DRAFT_4082 | | Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis | low | > 76 |
| Escherichia coli ECRC62 | 0.67 | BNILDI_05660 | cytR | DNA-binding transcriptional regulator CytR | 0.22 | BNILDI_13535 | arnB | UDP-4-amino-4-deoxy-L-arabinose aminotransferase | low | > 75 |
| Escherichia coli BW25113 | 0.67 | b3934 | cytR | DNA-binding transcriptional dual regulator (NCBI) | 0.22 | b2253 | arnB | uridine 5'-(beta-1-threo-pentapyranosyl-4-ulose diphosphate) aminotransferase, PLP-dependent (RefSeq) | low | > 76 |
| Escherichia coli ECRC101 | 0.67 | MCAODC_04225 | cytR | DNA-binding transcriptional regulator CytR | 0.54 | MCAODC_20510 | rfbE | GDP-perosamine synthase RfbE/PerA | — | — |
| Escherichia coli ECRC102 | 0.67 | NIAGMN_11480 | cytR | DNA-binding transcriptional regulator CytR | 0.54 | NIAGMN_22375 | rfbE | GDP-perosamine synthase RfbE/PerA | — | — |
| Escherichia coli ECOR38 | 0.67 | HEPCGN_12370 | cytR | DNA-binding transcriptional regulator CytR | 0.24 | HEPCGN_03130 | vioA | dTDP-4-amino-4,6-dideoxy-D-glucose aminotransferase VioA | — | — |
| Escherichia coli ECRC98 | 0.67 | JDDGAC_17350 | cytR | DNA-binding transcriptional regulator CytR | 0.54 | JDDGAC_28540 | rfbE | GDP-perosamine synthase RfbE/PerA | low | > 87 |
| Escherichia coli ECRC100 | 0.67 | OKFHMN_13725 | cytR | DNA-binding transcriptional regulator CytR | 0.54 | OKFHMN_24430 | rfbE | GDP-perosamine synthase RfbE/PerA | low | > 79 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.67 | OHPLBJKB_04117 | | HTH-type transcriptional repressor CytR | 0.22 | OHPLBJKB_01458 | | UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase | low | > 74 |
| Escherichia coli BL21 | 0.67 | ECD_03819 | | Anti-activator for CytR-CRP nucleoside utilization regulon | 0.24 | ECD_01942 | | VioA, involved in dTDP-N-acetylviosamine synthesis | — | — |
| Escherichia coli ECOR27 | 0.67 | NOLOHH_05870 | cytR | DNA-binding transcriptional regulator CytR | 0.23 | NOLOHH_14620 | arnB | UDP-4-amino-4-deoxy-L-arabinose aminotransferase | low | > 76 |
| Escherichia coli Nissle 1917 | 0.67 | ECOLIN_RS22650 | | DNA-binding transcriptional regulator CytR | 0.22 | ECOLIN_RS13125 | | UDP-4-amino-4-deoxy-L-arabinose aminotransferase | low | > 55 |
| Escherichia coli ECRC99 | 0.67 | KEDOAH_14435 | cytR | DNA-binding transcriptional regulator CytR | 0.54 | KEDOAH_03720 | rfbE | GDP-perosamine synthase RfbE/PerA | — | — |
| Escherichia fergusonii Becca | 0.67 | EFB2_04684 | | HTH-type transcriptional repressor CytR | 0.23 | EFB2_01603 | | UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase | low | > 86 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.66 | GFF2316 | | Transcriptional (co)regulator CytR | 0.25 | GFF1858 | | UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase (EC 2.6.1.-) | low | > 78 |
| Pantoea agglomerans CFBP13505 P0401 | 0.66 | PagCFBP13505_RS18480 | | DNA-binding transcriptional regulator CytR | 0.25 | PagCFBP13505_RS12240 | | UDP-4-amino-4-deoxy-L-arabinose aminotransferase | low | > 74 |
| Pantoea sp. MT58 | 0.66 | IAI47_00860 | | DNA-binding transcriptional regulator CytR | 0.25 | IAI47_21625 | | UDP-4-amino-4-deoxy-L-arabinose aminotransferase | low | > 76 |
| Pectobacterium carotovorum WPP14 | 0.66 | HER17_RS00865 | | DNA-binding transcriptional regulator CytR | 0.24 | HER17_RS06520 | | UDP-4-amino-4-deoxy-L-arabinose aminotransferase | low | > 75 |
| Erwinia amylovora T8 | 0.64 | OLJFJH_06075 | | DNA-binding transcriptional regulator CytR | 0.24 | OLJFJH_17365 | | UDP-4-amino-4-deoxy-L-arabinose aminotransferase | low | > 58 |
| Erwinia tracheiphila SCR3 | 0.64 | LU632_RS19660 | cytR | DNA-binding transcriptional regulator CytR | 0.24 | LU632_RS16495 | arnB | UDP-4-amino-4-deoxy-L-arabinose aminotransferase | low | > 74 |
| Erwinia tracheiphila HP pepo 2.2 | 0.64 | IJEDHG_13000 | cytR | DNA-binding transcriptional regulator CytR | 0.24 | IJEDHG_02605 | arnB | UDP-4-amino-4-deoxy-L-arabinose aminotransferase | low | > 61 |
| Dickeya dadantii 3937 | 0.61 | DDA3937_RS00930 | | DNA-binding transcriptional regulator CytR | 0.26 | DDA3937_RS21390 | | UDP-4-amino-4-deoxy-L-arabinose aminotransferase | low | > 74 |
| Dickeya dianthicola ME23 | 0.61 | DZA65_RS21490 | | DNA-binding transcriptional regulator CytR | 0.25 | DZA65_RS22610 | | UDP-4-amino-4-deoxy-L-arabinose aminotransferase | low | > 75 |
| Dickeya dianthicola 67-19 | 0.61 | HGI48_RS20445 | | DNA-binding transcriptional regulator CytR | 0.26 | HGI48_RS21625 | | UDP-4-amino-4-deoxy-L-arabinose aminotransferase | low | > 71 |
| Dyella japonica UNC79MFTsu3.2 | 0.47 | ABZR86_RS01690 | | LacI family DNA-binding transcriptional regulator | 0.18 | ABZR86_RS18520 | | DegT/DnrJ/EryC1/StrS family aminotransferase | low | > 74 |
| Pseudomonas sp. RS175 | 0.40 | PFR28_02584 | | HTH-type transcriptional repressor CytR | 0.23 | PFR28_00919 | | UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine transaminase | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.40 | AO356_22285 | | LacI family transcriptional regulator | 0.22 | AO356_03965 | | aminotransferase | — | — |
| Alteromonas macleodii MIT1002 | 0.39 | MIT1002_00363 | | HTH-type transcriptional repressor CytR | 0.22 | MIT1002_01078 | | UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine transaminase | low | > 70 |
| Pseudomonas fluorescens FW300-N2E2 | 0.39 | Pf6N2E2_322 | | Transcriptional regulator, LacI family | 0.23 | Pf6N2E2_2610 | | Bacillosamine/Legionaminic acid biosynthesis aminotransferase PglE; 4-keto-6-deoxy-N-Acetyl-D-hexosaminyl-(Lipid carrier) aminotransferase | low | > 103 |
| Caulobacter crescentus NA1000 | 0.39 | CCNA_01699 | | LacI-family transcriptional regulator | 0.41 | CCNA_01064 | | perosamine synthetase | low | > 66 |
| Caulobacter crescentus NA1000 Δfur | 0.39 | CCNA_01699 | | LacI-family transcriptional regulator | 0.41 | CCNA_01064 | | perosamine synthetase | low | > 67 |
| Pseudomonas sp. DMC3 | 0.38 | GFF1074 | | HTH-type transcriptional repressor CytR | 0.21 | GFF2433 | | UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase | low | > 89 |
| Pseudomonas fluorescens FW300-N1B4 | 0.38 | Pf1N1B4_4095 | | Transcriptional regulator, LacI family | 0.22 | Pf1N1B4_3586 | | DegT/DnrJ/EryC1/StrS aminotransferase | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.36 | QEN71_RS25305 | | LacI family DNA-binding transcriptional regulator | 0.22 | QEN71_RS29145 | | DegT/DnrJ/EryC1/StrS family aminotransferase | low | > 153 |
| Shewanella amazonensis SB2B | 0.36 | Sama_0294 | | LacI family transcription regulator (RefSeq) | 0.27 | Sama_2329 | | pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis (RefSeq) | low | > 62 |
| Burkholderia phytofirmans PsJN | 0.35 | BPHYT_RS04680 | | LacI family transcriptional regulator | 0.21 | BPHYT_RS08930 | | aminotransferase DegT | — | — |
| Paraburkholderia bryophila 376MFSha3.1 | 0.34 | H281DRAFT_00103 | | transcriptional regulator, LacI family | 0.22 | H281DRAFT_00805 | | dTDP-4-amino-4,6-dideoxygalactose transaminase | — | — |
| Sphingomonas koreensis DSMZ 15582 | 0.34 | Ga0059261_0555 | | transcriptional regulator, LacI family | 0.20 | Ga0059261_3110 | | Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis | — | — |
| Paraburkholderia graminis OAS925 | 0.33 | ABIE53_001217 | | LacI family repressor for deo operon, udp, cdd, tsx, nupC, and nupG | 0.22 | ABIE53_000145 | | dTDP-4-amino-4,6-dideoxygalactose transaminase | low | > 113 |
| Phaeobacter inhibens DSM 17395 | 0.29 | PGA1_c07800 | | putative transcriptional regulator, lacI family | 0.22 | PGA1_c05070 | | putative pyridoxal-phosphate-dependent aminotransferase | low | > 62 |
| Echinicola vietnamensis KMM 6221, DSM 17526 | 0.28 | Echvi_3495 | | Transcriptional regulators | 0.24 | Echvi_0062 | | Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis | low | > 79 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.27 | ABZR88_RS10530 | | LacI family DNA-binding transcriptional regulator | 0.28 | ABZR88_RS12735 | | DegT/DnrJ/EryC1/StrS aminotransferase family protein | low | > 71 |
| Cupriavidus basilensis FW507-4G11 | 0.27 | RR42_RS27820 | | GntR family transcriptional regulator | 0.25 | RR42_RS15735 | | pyridoxal phosphate-dependent aminotransferase | low | > 128 |
| Phocaeicola vulgatus CL09T03C04 | 0.26 | HMPREF1058_RS09530 | | LacI family DNA-binding transcriptional regulator | 0.20 | HMPREF1058_RS03380 | | DegT/DnrJ/EryC1/StrS family aminotransferase | low | > 67 |
| Phocaeicola dorei CL03T12C01 | 0.26 | ABI39_RS03985 | | LacI family DNA-binding transcriptional regulator | 0.27 | ABI39_RS13755 | | aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme | low | > 72 |
| Bacteroides thetaiotaomicron VPI-5482 | 0.26 | BT3613 | | LacI family transcriptional regulator (NCBI ptt file) | 0.22 | BT3376 | | nucleotide sugar transaminase (NCBI ptt file) | low | > 81 |
| Cellulophaga baltica 18 | 0.26 | M666_RS10675 | | LacI family DNA-binding transcriptional regulator | 0.28 | M666_RS12340 | | aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme | low | > 67 |
| Bacteroides ovatus ATCC 8483 | 0.25 | BACOVA_03411 | | sugar-binding domain protein | 0.20 | BACOVA_03734 | | DegT/DnrJ/EryC1/StrS aminotransferase family protein | low | > 96 |
| Rhodospirillum rubrum S1H | 0.25 | Rru_A1973 | | Transcriptional Regulator, LacI family (NCBI) | 0.21 | Rru_A2746 | | DegT/DnrJ/EryC1/StrS aminotransferase (NCBI) | low | > 58 |
| Bacteroides stercoris CC31F | 0.24 | HMPREF1181_RS05535 | | LacI family DNA-binding transcriptional regulator | 0.18 | HMPREF1181_RS14960 | | aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme | low | > 56 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.24 | Xcc-8004.1274.1 | | transcriptional regulator lacI family | 0.22 | Xcc-8004.2801.1 | | Aminotransferase, DegT/DnrJ/EryC1/StrS family | low | > 74 |
| Bosea sp. OAE506 | 0.24 | ABIE41_RS20550 | | LacI family DNA-binding transcriptional regulator | 0.17 | ABIE41_RS03045 | | dTDP-4-amino-4,6-dideoxygalactose transaminase | 0.28 | 36 |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.24 | A4249_RS03600 | | LacI family DNA-binding transcriptional regulator | 0.19 | A4249_RS13795 | | DegT/DnrJ/EryC1/StrS aminotransferase family protein | — | — |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.23 | GFF4454 | | Transcriptional regulator, LacI family | 0.20 | GFF1844 | | Aminotransferase | low | > 90 |
| Pedobacter sp. GW460-11-11-14-LB5 | 0.22 | CA265_RS24625 | | LacI family transcriptional regulator | 0.35 | CA265_RS01760 | | aminotransferase DegT | low | > 88 |
| Shewanella loihica PV-4 | 0.21 | Shew_1870 | | LacI family transcription regulator (RefSeq) | 0.20 | Shew_1319 | | DegT/DnrJ/EryC1/StrS aminotransferase (RefSeq) | low | > 60 |
Not shown: 7 genomes with orthologs for CSW01_13525 only; 35 genomes with orthologs for CSW01_01285 only